Assisted reproduction and Prader–Willi syndrome

see Frequency of Prader–Willi syndrome in births conceived via assisted reproductive technology

Assisted reproductive technology (ART), which enables couples having difficulty conceiving to bear children, is not without risk. The technology has been associated with an increased frequency of certain imprinting disorders. Gold et al. studied a cohort of children with Prader–Willi syndrome (PWS) and found that the use of ART by their parents did not seem to be higher than that for parents of other children. In an analysis of surveys completed by members of the Prader–Willi Syndrome Association, along with medical records, the research team determined that 1.1% of individuals with PWS were conceived using ART, compared with 1% of the general population, an insignificant difference. However, there was a significant difference in the cause of PWS among ART users. In this group, more cases were caused by maternal uniparental disomy (UPD) and imprinting defects than in the general population. The study is the first to report cases of an imprinting-center defect in PWS patients conceived via ART. The investigators suggest that the increase may be explained by the fact that the parents of those in the ART-conceived group were significantly older (mean age 36.3 and 39.7 years for mothers and fathers, respectively) than those of the naturally conceived group (31.5 and 31.6 years, respectively), and maternal UPD is associated with maternal age at conception. The age of parents using reproductive technologies must be taken into account when evaluating the risks associated with the technology. —Karyn Hede, News Editor

Next-Gen Sequencing Company Reports Clinical Carrier Screening Technique

see Next-generation carrier screening

Next-generation DNA sequencing is poised to supplant traditional genotyping methods for many genetic screening applications. But before it can do so, the technique must jump the hurdles of speed, accuracy, and cost per test. Researchers from the clinical diagnostic company Good Start Genetics, based in Cambridge, Massachusetts, report that they have developed a proprietary method that can provide cost-efficient genotyping that is as accurate as traditional methods while providing more detailed information. Noting that accuracy and reproducibility have been an issue with previously described next-gen methods, the authors explain that the new method uses commercial sequencing technology combined with probes designed to capture regions of interest in 15 well-known recessive Mendelian disorders. The sample set of 194 yielded a single-nucleotide-variant false-positive rate of 1.1 per million base pairs and one false negative. The authors do not provide precise measurements of insertion/deletion detection accuracy but report a sensitivity of 95.3% in the reference set. The company has developed an automated workflow that processes the steps from isolating DNA from blood or cell lines to delivery of a clinical report within 6 days. Of course, next-gen methods are not yet appropriate for some types of mutations, including certain large deletions and chromosomal rearrangements, but for routine testing of common Mendelian disease traits, they are rapidly gaining ground. —Karyn Hede, News Editor