Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Original Manuscript
  • Published:

Aberrant methylation and impaired expression of the p15INK4b cell cycle regulatory gene in chronic myelomonocytic leukemia (CMML)

Abstract

The important cell cycle regulatory gene p15INK4b has been shown to be inactivated in acute myeloid leukemia and myelodysplastic syndrome. Little is known about the expression and epigenetic modification of this gene in chronic myelomonocytic leukemia (CMML) that belongs to the myelodysplastic/myeloproliferative disorders (MDS/MPD) with a high proportion of blastic transformation. Analysis of bone marrow trephines in a series of 33 CMML cases showed an aberrant p15INK4b gene methylation in up to 58% of cases. Methylation was analyzed employing different methylation-specific PCR and genomic sequencing protocols. It turned out to be spread over a broad area of the 5′ region and exhibited substantial heterogeneity between cases and even in individual patients. The degree of aberrant methylation was correlated with a reduced mRNA as well as reduced protein expression, and was associated with a higher expression of DNA methyltransferase DNMT 3A. We conclude that aberrant gene methylation is a frequent event in CMML that might contribute to the pathogenesis of this MDS/MPD.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6

Similar content being viewed by others

References

  1. Jones PA, Laird PW . Cancer epigenetics comes of age. Nat Genet 1999; 21: 163–167.

    Article  CAS  PubMed  Google Scholar 

  2. Obaya AJ, Sedivy JM . Regulation of cyclin-Cdk activity in mammalian cells. Cell Mol Life Sci 2002; 59: 126–142.

    Article  CAS  PubMed  Google Scholar 

  3. Esteller M . CpG island hypermethylation and tumor suppressor genes: a booming present, a brighter future. Oncogene 2002; 21: 5427–5440.

    Article  CAS  PubMed  Google Scholar 

  4. Dodge JE, List AF, Futscher BW . Selective variegated methylation of the p15 CpG island in acute myeloid leukemia. Int J Cancer 1998; 78: 561–567.

    Article  CAS  PubMed  Google Scholar 

  5. Aggerholm A, Guldberg P, Hokland M, Hokland P . Extensive intra- and interindividual heterogeneity of p15INK4B methylation in acute myeloid leukemia. Cancer Res 1999; 59: 436–441.

    CAS  PubMed  Google Scholar 

  6. Heaney ML, Golde DW . Myelodysplasia. N Engl J Med 1999; 340: 1649–1660.

    Article  CAS  PubMed  Google Scholar 

  7. Quesnel B, Fenaux P . P15INK4b gene methylation and myelodysplastic syndromes. Leukemia Lymphoma 1999; 35: 437–443.

    Article  CAS  PubMed  Google Scholar 

  8. Preisler HD, Li B, Chen H, Fisher L, Nayini J, Raza A et al. P15INK4B gene methylation and expression in normal, myelodysplastic, and acute myelogenous leukemia cells and in the marrow cells of cured lymphoma patients. Leukemia 2001; 15: 1589–1595.

    Article  CAS  PubMed  Google Scholar 

  9. Tien HF, Tang JH, Tsay W, Liu MC, Lee FY, Wang CH et al. Methylation of the p15(INK4B) gene in myelodysplastic syndrome: it can be detected early at diagnosis or during disease progression and is highly associated with leukaemic transformation. Br J Haematol 2001; 112: 148–154.

    Article  CAS  PubMed  Google Scholar 

  10. Bennett JM, Catovsky D, Daniel MT, Flandrin G, Galton DA, Gralnick HR et al. Proposals for the classification of the myelodysplastic syndromes. Br J Haematol 1982; 51: 189–199.

    Article  CAS  PubMed  Google Scholar 

  11. Harris NL, Jaffe ES, Diebold J, Flandrin G, Muller-Hermelink HK, Vardiman J et al. The World Health Organization classification of hematological malignancies report of the Clinical Advisory Committee Meeting, Airlie House, Virginia, November 1997. Mod Pathol 2000; 13: 193–207.

    Article  CAS  PubMed  Google Scholar 

  12. Uchida T, Kinoshita T, Nagai H, Nakahara Y, Saito H, Hotta T et al. Hypermethylation of the p15INK4B gene in myelodysplastic syndromes. Blood 1997; 90: 1403–1409.

    CAS  PubMed  Google Scholar 

  13. Quesnel B, Guillerm G, Vereecque R, Wattel E, Preudhomme C, Bauters F et al. Methylation of the p15(INK4b) gene in myelodysplastic syndromes is frequent and acquired during disease progression. Blood 1998; 91: 2985–2990.

    CAS  PubMed  Google Scholar 

  14. Daskalakis M, Nguyen TT, Nguyen C, Guldberg P, Kohler G, Wijermans P et al. Demethylation of a hypermethylated P15/INK4B gene in patients with myelodysplastic syndrome by 5-Aza-2′-deoxycytidine (decitabine) treatment. Blood 2002; 100: 2957–2964.

    Article  CAS  PubMed  Google Scholar 

  15. Lehmann U, Hasemeier B, Lilischkis R, Kreipe H . Quantitative analysis of promoter hypermethylation in laser-microdissected archival specimens. Lab Invest 2001; 81: 635–638.

    Article  CAS  PubMed  Google Scholar 

  16. Bock O, Kreipe H, Lehmann U . One-step extraction of RNA from decalcified and archival biopsies. Anal Biochem 2001; 295: 116–117.

    Article  CAS  PubMed  Google Scholar 

  17. von Wasielewski R, Mengel M, Gignac S, Wilkens L, Werner M, Georgii A . Tyramine amplification technique in routine immunohistochemistry. J Histochem Cytochem 1997; 45: 1455–1459.

    Article  CAS  PubMed  Google Scholar 

  18. Herman JG, Graff JR, Myohanen S, Nelkin BD, Baylin SB . Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands. Proc Natl Acad Sci USA 1996; 93: 9821–9826.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  19. Nguyen C, Liang G, Nguyen TT, Tsao-Wei D, Groshen S, Lubbert M et al. Susceptibility of nonpromoter CpG islands to de novo methylation in normal and neoplastic cells. J Natl Cancer Inst 2001; 93: 1465–1472.

    Article  CAS  PubMed  Google Scholar 

  20. Robertson KD . DNA methylation, methyltransferases, and cancer. Oncogene 2001; 20: 3139–3155.

    Article  CAS  PubMed  Google Scholar 

  21. Wajed SA, Laird PW, DeMeester TR . DNA methylation: an alternative pathway to cancer. Ann Surg 2001; 234: 10–20.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Widschwendter M, Jones PA . The potential prognostic, predictive, and therapeutic values of DNA methylation in cancer. (Commentary re: J Kwong et al, Promoter hypermethylation of multiple genes in nasopharyngeal carcinoma. Clin Cancer Res 2002; 8: 131–137, and H-Z Zou et al, Detection of aberrant p16 methylation in the serum of colorectal cancer patients. Clin Cancer Res 2002; 8: 188–191, Clin Cancer Res 2002; 8: 17–21.

    Google Scholar 

  23. Aoki E, Uchida T, Ohashi H, Nagai H, Murase T, Ichikawa A et al. Methylation status of the p15INK4B gene in hematopoietic progenitors and peripheral blood cells in myelodysplastic syndromes. Leukemia 2000; 14: 586–593.

    Article  CAS  PubMed  Google Scholar 

  24. Turker MS . Gene silencing in mammalian cells and the spread of DNA methylation. Oncogene 2002; 21: 5388–5393.

    Article  CAS  PubMed  Google Scholar 

  25. Livak KJ, Schmittgen TD . Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 2001; 25: 402–408.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We thank Britta Hasemeier for expert assistance in preparing the figures as well as Henriette Bruchhardt and Reinhard von Wasielewski for assistance and advice, respectively, concerning the immunohistochemical detection of the p15INK4b protein. Grant numbers and sources of support: Deutsche Krebshilfe, Grant 10-1842-Le I.

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tessema, M., Länger, F., Dingemann, J. et al. Aberrant methylation and impaired expression of the p15INK4b cell cycle regulatory gene in chronic myelomonocytic leukemia (CMML). Leukemia 17, 910–918 (2003). https://doi.org/10.1038/sj.leu.2402891

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.leu.2402891

Keywords

This article is cited by

Search

Quick links