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Letter
Nature Genetics  37, 495 - 500 (2005)
Published online: 3 April 2005; | doi:10.1038/ng1536

Combinatorial microRNA target predictions

Azra Krek, Dominic Grün, Matthew N Poy, Rachel Wolf, Lauren Rosenberg, Eric J Epstein, Philip MacMenamin, Isabelle da Piedade, Kristin C Gunsalus, Markus Stoffel & Nikolaus Rajewsky

Supplementary Table 1 (xls 12K)
Set of 58 unique microRNAs conserved in human/chimp/mouse/rat/dog/chicken.

Supplementary Table 2 (xls 3M)
Predictions for single microRNA targets based on conservation in human/chimp/mouse/rat/dog/chicken.

Supplementary Table 3 (xls 8M)
Predictions for single microRNA targets based on conservation in human/chimp/mouse/rat/dog.

Supplementary Table 4 (xls 396K)
Predictions for combinatorially targeted transcripts in four different tissues for sets of co-expressed microRNAs.

Supplementary Note (pdf 20K)
Detailed description of the PicTar probabilistic scoring method.

Supplementary Methods (pdf 72K)
The nematode sequence datasets, evolutionary conservation check and testing the quality of vertebrate alignments.


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Nature Genetics
ISSN: 1061-4036
EISSN: 1546-1718
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