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Nature Genetics
ISSUE
April 2001, Volume 27 No Supp
Poster abstractsAburatani, Hiroyuki | Adya, Neeraj | Afshari, Cynthia | Ahluwalia, A. | Ali, Shujath | Allander, Susanne | Alsner, Jan | Amler, Lukas | Aprelikova, Olga | Arbieva, Zarema | Baas, Frank | Badie, Behnam | Baggerly, Keith | Baldocchi, Russ | Basilion, J.P. | Barrett, Michael | Baumbach-Reardon, Lisa | Baxevanis, Andreas D. | Beaulieu, Martin | Belbin, Thomas | Bertoni, Francesco | Berx, Geert | Bharucha, Vandana | Bojar, Hans | Bonnet, Jacques | Bourdon, Veronique | Boyd, Scott D. | Brenner, Charles | Butte, Atul J. | Cano, Pedro | Carr, Kristen | Chen, Danian | Chen, Sei-Yu | Chen, Yidong | Chen, Zhong | Chodosh, Lewis | Chuang, Y. Eric | Chung, L. Ping | Collins, Colin | Coombes, K.R. | Cornwell, Paul | Couch, Fergus | Cravatt, Benjamin | Dedhar, Shoukat | Diehl, Frank | Diehn, Maximilian | Divine, Kevin K. | Dougherty, Edward | Duffy, Carol | Duggan, David J. | Dunn, Sandra, E. | Eckart, Meese | Einspahr, Janine | Elkahloun, Abdel G. | English, Jessie | Farnham, Peggy | Fox, Jay | Frengen, Eirik | Fruehauf, John | Fung, Eric | Gangi, Lisa | Gavin, Mark | Giannella-Neto, Daniel | Gieseg, Michael | Gillanders, E. | Gokgoz, Nalan | Golubic, Mladen | Grandori, Carla | Graveel, Carrie | Gregg, Jeff | Hager, Jeff | He, Huiling | Hedenfalk, Ingrid | Hegi, Monika | Helou, Khalil | Hermann, Thomas | Herrmann, John | Hester, Susan | Holzmann, Klaus | Huang, Kuan-Chun | Huang, Tim Hui-Ming | Huminiecki, Lukasz | Ignatovich, Irina A. | Inoue, Norimitsu | Jain, Ajay | Jazaeri, Amir | Jeffs, Aaron | Joseph, Pius | Kallioniemi, Anne | Kaminski, Naftali | Kannan, Karuppiah | Kasai, Masataka | Khan, Javed | Kinoshita, Ichiro | Kirsch, Ilan | Klein, Christoph | Krahe, Ralf | Krupke, Debra M. | Kuzumaki, Noboru | Lacher, Markus | Larson, Garry P. | Lau, Ching | Lee, Ann | Leszczynski, Dariusz | Lin, Lin | Linder, Stig | Ling, Zhang | Lingen, Mark | Lingle, Wilma | Linja, Marika | Liu, Hsiao-Ching | Los, Gerrit | Lucito, Robert | Lushnikova, Tamara | Madden, Stephen | Magee, Jeffrey | Mahadevappa, Mamatha | Mariani, Luigi | Martinez, Maria Elena | Masys, Daniel | McNiel, Elizabeth A. | Medico, Enzo | Mendez, Eduardo | Merajver, Sofia | Miller, Lance | Monni, Outi | Montpetit, Alexandre | Mousses, Spyro | Mutter, George L. | Myklebost, Ola | Norman, Sylvia | Novoradovskaya, Natalia | Nuchtern, Jed | O'Connor, Maureen | Onay, U. Venus | Orr, Michael | Parodi, Silvio | Paules, Richard S. | Pedersen, Tanja X. | Perry, Mary Ellen | Peters, Mette A. | Petros, John | Plaschke, Jens | Plass, Christoph | Pollock, Pamela M. | Porkka, Kati | Porter, Peggy L. | Randazzo, Filippo | Ratner, Nancy | Reboul, J. | Reeve, Anthony | Riggins, Gregory J. | Ringner, Markus | Romagnolo, Donato | Sakamoto, Kathleen | Salceda, Susana | Samatar, Ahmed | Samimi, Goli | Sanchez-Carbayo, Marta | Schmidt-Kittler, Oleg | Schnitzer, Jan | Schubert, Elizabeth | Schulze, Almut | Shoshan, Maria | Shoshan, M.C. | Sinibaldi, Dominic | Sinnett, Daniel | Sjögren, Helene | Smith, David I. | Sood, Raman | Sorensen, Poul H.B. | Sotiriou, Christos | Stenman, Göran K.D. | Stephan, D.A. | Sulman, Erik P. | Sutphin, Patrick D. | Suxing, Liu | Takahashi, Yasuo | Tanenbaum, David | Tast, David | Tonko, Martin | Toshihito, Nagata | Uchida, Kazuhiko | van der Pluijm, Gabri | Vandesompele, Jo | Varley, Jenny | Vidal, Marc | Villuendas, Raquel | Vinals, Carla | Visvanathan, Jaya | Volik, Stanislav | Watson, Mark | Watts, George | Weisz, Alessandro | Westbrook, Carol | Williams, Kathleen | Wolfl, Stefan | Xiong, Momiao | Yakhini, Zohar | Yamazaki, Victoria | Yang, Ping | Yang, Xiang-Jiao | Yeung, Ka Yee | Yuan, Bo | Zarbl, Helmut | Zhao, Lue Ping | Chen, Jianjun | Jarjanazi, Hamdi
About the cover
Poster abstracts Top
Aburatani, Hiroyuki
Classification of hepatocellular carcinoma with gene expression profiling analysis p37
Hiroyuki Aburatani, Yasushi Midorikawa, Shuichi Tsutsumi & Yuko Kobune
doi:10.1038/86964
Full text | PDF (28K)
Adya, Neeraj
Characterizing gene expression profile of Inv(16)-associated leukemia p37
N. Adya, Y. Chen, E. Hilgenfeld, J. Khan, M. Bittner, H. Serve, W.E. Berdel, P. Meltzer & P.P. Liu
doi:10.1038/86966
Full text | PDF (28K)
Afshari, Cynthia
Combination of functional genomics approaches and microarray analyses to define candidate senescence genes p37
Lois Annab, Natalay Kouprina, Vladimir Larionov, Patrick Vojta, Motonobu Katoh, Pierre Bushel, Karla Martin, Mitsuo Oshimura, J. Carl Barrett & Cynthia Afshari
doi:10.1038/86968
Full text | PDF (28K)
Ahluwalia, A.
Methylation: a predictor of chemotherapy response in ovarian cancer? p38
A. Ahluwalia, P. Yan, T.H.-M. Huang & K.P. Nephew
doi:10.1038/86970
Full text | PDF (28K)
Ali, Shujath
Genomic approaches to the development of prostate cancer diagnostics p38
Shujath Ali, Yongming Sun, Carrie Drumright, Luis Carretero, Christina Tran, Anton Nguyen, Dan Medynski, Yan Liu, Vu Viet Hoang, Brandon Liang, Herve Recipon, Robert Cafferkey & Roberto Macina
doi:10.1038/86972
Full text | PDF (28K)
Allander, Susanne
Microarray-based genetic analysis of synovial sarcomas p38
Susanne Allander, Yidong Chen, Marc Ladanyi & Paul Meltzer
doi:10.1038/86974
Full text | PDF (28K)
Alsner, Jan
Detection of TP53 mutations by denaturing high-performance liquid chromatography pp38 - 39
Jan Alsner, Susanne Berg Sorensen, Jesper Grau Eriksen & Jens Overgaard
doi:10.1038/86976
Full text | PDF (38K)
Amler, Lukas
Functional dissection of transcriptional profiles in androgen-dependent and -independent prostate cancer p39
Lukas Amler, David Agus, Nicholas Dracopoli, Howard Scher & Garret Hampton
doi:10.1038/86978
Full text | PDF (28K)
Dysregulated expression of androgen-responsive and nonresponsive genes in the androgen-independent prostate cancer xenograft model, CWR22-R p39
Lukas Amler, David Agus, Carrie LeDuc, Lisa Sapinoso, William Fox, Suzanne Kern, Dori Lee, Vivian Wang, Mauri Leysens, Brian Higgins, Jason Martin, William Herald, Nicholas Dracopoli, Carlos Cordon-Cardo, Howard Scher & Garret Hampton
doi:10.1038/86980
Full text | PDF (28K)
Aprelikova, Olga
Differential gene expression in cells with targeted deletion of BRCA1 tumor suppressor p39
Olga Aprelikova, Amy Pace, Beverly Koller & Edison Liu
doi:10.1038/86982
Full text | PDF (28K)
Arbieva, Zarema
Identification of downstream targets of the putative tumor suppressor gene on 8p by differential gene expression analysis p40
Zarema Arbieva, Kumarika Banerjee, Lydia Usha, Tiffany Le, Ignatius Gomes & Carol Westbrook
doi:10.1038/86984
Full text | PDF (28K)
Baas, Frank
SAGE analysis of pediatric tumors identifies new markers and common genetic pathways p40
Frank Baas, Esmee Oussoren, Anneloor ten Asbroek, Marjon Groenigen, Jennifer Benit-Deekman & Marcel Kool
doi:10.1038/86986
Full text | PDF (28K)
Badie, Behnam
Genomic analysis of low-grade gliomas using oligonucleotide arrays p40
Behnam Badie, Sakthivel Prabakaran & Jill Schartner
doi:10.1038/86988
Full text | PDF (28K)
Baggerly, Keith
Modeling significance and reproducibility on high-density cDNA microarrays p40
Keith Baggerly, Kevin Coombes, Kenneth Hess, David Stivers, Lynne Abruzzo & Wei Zhang
doi:10.1038/86990
Full text | PDF (28K)
Baldocchi, Russ
Hybridization to oligonucleotide arrays for the assessment of gene copy number p41
Russ Baldocchi, Richard Glynne, Dave Kowbel, Ed Tom, Colin Collins, David Mack & Joe Gray
doi:10.1038/86992
Full text | PDF (32K)
Basilion, J.P.
Magnetic resonance imaging of HSV-based in vivo transgene expression p41
Dagmar Hoegemann, Tomo Ichikawa, E.A. Chiocca, Ralph Weissleder & James P. Basilion
doi:10.1038/86994
Full text | PDF (32K)
Barrett, Michael
Transcriptional analysis of tetraploid epithelial cells in Barrett's esophagus p41
Michael Barrett, David Pritchard, Judy Anderson, Brian Reid & Peter Rabinovitch
doi:10.1038/86996
Full text | PDF (32K)
Baumbach-Reardon, Lisa
Completed BRCA1/BRCA2 mutation analysis reveals a low rate of germline mutation in at-risk African American families pp41 - 42
Lisa Baumbach-Reardon, Luis Gayol, Tom Scholl, Hugo Basterrechea, Selina Smith & J. Fernando Arena
doi:10.1038/86998
Full text | PDF (43K)
Baxevanis, Andreas D.
An integrated approach to the extraction, storage, processing and analysis of microarray gene expression data p42
Andreas D. Baxevanis, Izabela Makalowska, Kenneth Trout, Qien Zhou, Zheng-Zheng Zhou, Jaime Stein, Edward R. Dougherty, Paul S. Meltzer, Yidong Chen, Michael L. Bittner & Jeffrey M. Trent
doi:10.1038/87000
Full text | PDF (29K)
Beaulieu, Martin
High-throughput genotyping using candidate region mismatch scanning (PCR-CRMS) p42
Martin Beaulieu, Ching Ouyang, Garry Larson, Louis Geller, Steven Flanagan & Theodore Krontiris
doi:10.1038/87002
Full text | PDF (29K)
Belbin, Thomas
Molecular classification of head and neck squamous cell carcinoma using cDNA microarrays pp42 - 43
Thomas Belbin, Bhuvanesh Singh, Ilana Barber, Bruce Wenig, Richard Smith, Mike Prystowsky & Geoffrey Childs
doi:10.1038/87004
Full text | PDF (37K)
Bertoni, Francesco
Construction of a chromosome 11q22−23 BAC/PAC contig to characterize deletions in lymphoproliferative disorders p43
Francesco Bertoni, Rebecca Auer, Roman Müllenbach, Chris Jones & Finbarr Cotter
doi:10.1038/87006
Full text | PDF (27K)
Berx, Geert
E-cadherin controlling epithelial differentiation in human carcinomas p43
Geert Berx, Kristin Strumane, Joke Comijn & Frans Van Roy
doi:10.1038/87008
Full text | PDF (27K)
Bharucha, Vandana
Analysis of the CBFB, CBFA2 and AF-9 genes in familial acute myelogenous leukemia p43
Vandana Bharucha, Asim Belgaumi, Kishor Bhatia, Hassan El Solh & Colin Hodgkinson
doi:10.1038/87010
Full text | PDF (27K)
Bojar, Hans
In situ monitoring of early effects of epirubicin-based neoadjuvant chemotherapy in breast cancer by cDNA array technology p44
Hans Bojar, Hans Bernd Prisack, Olga Modlich, Mohmoud Danaei, Jörg Rahnenführer & Werner Audretsch
doi:10.1038/87012
Full text | PDF (29K)
Bonnet, Jacques
Doxorubicin-induced alterations of the gene expression profiles of leukemia cells in culture using cDNA microarrays p44
Antoine Vekris, François Godard, Marie-Christine Haaz, Jacques Robert & Jacques Bonnet
doi:10.1038/87014
Full text | PDF (29K)
Bourdon, Veronique
A 12p array to identify amplified and overexpressed sequences in testicular germ cell tumors p44
Veronique Bourdon, Musa M. Mhlanga, Aldo Massimi, Sanjay Tyagi, Raju Kucherlapati & Raju S.K. Chaganti
doi:10.1038/87016
Full text | PDF (29K)
Boyd, Scott D.
Targets of the p53-related transcription factors p45
Scott D. Boyd, Elsa R. Flores & Tyler Jacks
doi:10.1038/87018
Full text | PDF (28K)
Brenner, Charles
Genomic approaches to elucidation of the Fhit pathway in worms and yeast: Rosetta Stone and synthetic lethals p45
Charles Brenner
doi:10.1038/87020
Full text | PDF (28K)
Butte, Atul J.
Analyzing functional genomic differences yields oncogenes and chromosomal breakpoints in ALL and AML p45
Atul J. Butte, Ben Reis, Alvin Kho, Yao Sun & Isaac S. Kohane
doi:10.1038/87022
Full text | PDF (28K)
Cano, Pedro
Information theory in the analysis of gene expression microarray data p45
Pedro Cano
doi:10.1038/87024
Full text | PDF (28K)
Carr, Kristen
Relationship between gene expression profile and clinical outcome in malignant melanoma p46
Kristen Carr, Mike Bittner, Yidong Chen, Paul Meltzer, Paul Duray, Vern Sondak & Jeffrey Trent
doi:10.1038/87026
Full text | PDF (31K)
Chen, Danian
Genomic amplification in retinoblastoma narrowed to 1.2 Mb on chromosome 6p containing a novel kinesin-like gene, RBKIN p46
Danian Chen, Jeremy Squire & Brenda Gallie
doi:10.1038/87028
Full text | PDF (31K)
Chen, Sei-Yu
Genomics-based strategies for the identification of lung cancer diagnostic targets p46
Sei-Yu Chen, Muriel Kmet, Carrie Drumright, Brandon Liang, Vu Viet Hoang, Herve Recipon, Yongming Sun, Ping Hu & Roberto A. Macina
doi:10.1038/87030
Full text | PDF (31K)
Chen, Yidong
cDNA microarray analysis using both gene expression ratios and intensities pp46 - 47
Yidong Chen, Hongen Zhang, Sujatha Panavally, Edward Dougherty, Michael Bittner, Paul Meltzer & Jeffery Trent
doi:10.1038/87032
Full text | PDF (40K)
Chen, Zhong
Molecular profiling of metastatic tumor progression of a murine squamous cell carcinoma by differential display and cDNA microarray reveals dysregulated expression of genes related to the nuclear factor-kappab signal pathway p47
Gang Dong, Elena Loukinova, Zhong Chen, Lisa Gangi, Edison Liu & Carter Van Waes
doi:10.1038/87034
Full text | PDF (28K)
Chodosh, Lewis
Functional analysis of mammary development using oligonucleotide microarrays p47
Stephen Master, Jennifer Hartman, Alexander Stoddard, Elizabeth Keiper, Susan Moody, Celina D'Cruz & Lewis Chodosh
doi:10.1038/87036
Full text | PDF (28K)
Chuang, Y. Eric
Effects of p53 in human lymphoblast cells following ionizing radiation using 7K cDNA microarrays pp47 - 48
Y. Eric Chuang, Howard Liber, Louis Staudt & James Mitchell
doi:10.1038/87038
Full text | PDF (37K)
Chung, L. Ping
Allelic imbalance in lung cancers of nonsmokers in Hong Kong p48
Maria P. Wong, L. Ping Chung, W.K. Lam, S.W. Chiu & K. H. Fu
doi:10.1038/87040
Full text | PDF (27K)
Collins, Colin
Comprehensive sequence analysis of a human 20q13.2 cancer amplicon p48
Colin Collins, Stanislav Volik, David Kowbel, Meredith Wernick, Trevor Hawkins, Paul Predki, Wen-Lin Kuo & Joe Gray
doi:10.1038/87042
Full text | PDF (27K)
Coombes, K.R.
Identifying and quantifying sources of variation in high-density cDNA microarray data using 33P-labeled probes pp48 - 49
K.R. Coombes, K.A. Baggerly, L.V. Abruzzo, W.E. Highsmith, T. Krogmann & D.N. Stivers
doi:10.1038/87044
Full text | PDF (37K)
Cornwell, Paul
Differences in transcript profiles between hepatocarcinogen-sensitive and -resistant mice as a basis for understanding chemical induction of mouse liver tumors p49
Paul Cornwell, Ashley Laughter, Steven Anderson & Chris Corton
doi:10.1038/87046
Full text | PDF (29K)
Couch, Fergus
Expression analysis of breast cancer progression p49
Fergus Couch, Youzhen Wang, Kathleen Steinmann, YongYao Xu, Maureen Mertens, James Ingle, James Lillie & Patrick Roche
doi:10.1038/87048
Full text | PDF (29K)
Cravatt, Benjamin
Chemical strategies for the global analysis of protein function: Profiling hydrolytic enzymes in cancer p49
Benjamin Cravatt & Yongsheng Liu
doi:10.1038/87050
Full text | PDF (29K)
Dedhar, Shoukat
Integrin-linked kinase regulates E-cadherin expression by means of the transcription factor Snail p50
Shoukat Dedhar
doi:10.1038/87052
Full text | PDF (31K)
Diehl, Frank
Expression profiling of cervical cancer biopsies using high-resolution dual-label imaging of 33P and 3H on microarrays p50
Frank Diehl, Matthias Nees, Heinz Filthuth, Magnus von Knebel-Doeberitz & Jörg Hoheisel
doi:10.1038/87054
Full text | PDF (31K)
Diehn, Maximilian
From gene expression to the bedside: A high-throughput approach for identifying serum diagnostic markers and immunotherapy targets in human malignancies using DNA microarrays p50
Maximilian Diehn, Michael B. Eisen, David Botstein & Patrick O. Brown
doi:10.1038/87056
Full text | PDF (31K)
Divine, Kevin K.
Inactivation of p16 by methylation in human lung adenocarcinoma pp50 - 51
Kevin K. Divine, Frank D. Gilland, Christine A. Stidley, Therese J. Bocklage, Ann Schwartz, Dennis L. Cook & Steven A. Belinsky
doi:10.1038/87058
Full text | PDF (40K)
Dougherty, Edward
Clustering algorithms: can anything be concluded? p51
Edward Dougherty, Junior Barrera, Marcel Brun, Seungchan Kim, Roberto Marcondes, Yidong Chen, Michael Bittner & Jeffrey Trent
doi:10.1038/87060
Full text | PDF (28K)
Duffy, Carol
Oligonucleotide array analysis of telomerase activation by the human papillomavirus type 16 E6 protein p51
Carol Duffy & Aloysius Klingelhutz
doi:10.1038/87062
Full text | PDF (28K)
Duggan, David J.
Molecular profiling of prostate cancer progression pp51 - 52
David J. Duggan, Jun Luo, Jurga Sauvageot, Michael Bittner, Yidong Chen, Jeff Trent & William B. Isaacs
doi:10.1038/87064
Full text | PDF (36K)
Dunn, Sandra, E.
Gene expression profiling of normal breast epithelial cells following treatment with insulin-like growth factor I p52
Jennifer S. Oh, Pierre Buchel, Karla Martin, Jill E. Kucab, Tomo Oshimura, Lee Bennett, Kelli Reynolds, David M. Cykert, J. Carl Barrett, Richard P. DiAugustine, Cynthia Afshari & Sandra E. Dunn
doi:10.1038/87066
Full text | PDF (27K)
Eckart, Meese
Genes overexpressed in the transition zone from normal to tumor tissue in larynx and pharynx carcinoma p52
Eckart Meese, Jörg Bohlender, Helmut Steinhart & Ulrike Fischer
doi:10.1038/87068
Full text | PDF (27K)
Einspahr, Janine
Mutation and overexpression of p53 as intermediate biomarkers in the chemoprevention of skin cancer p52
Janine Einspahr, David Alberts, Nancy Hart, Nelson Mark & Bowden Timothy
doi:10.1038/87070
Full text | PDF (27K)
Elkahloun, Abdel G.
Gene expression profile analysis of 13 human breast cancer specimens using laser capture microdissection and cDNA arrays p53
Abdel G. Elkahloun, Greg Robinson & Dennis C. Sgroi
doi:10.1038/87072
Full text | PDF (29K)
English, Jessie
Expression profiling of lung cancer cell lines p53
Priya Dayananth, Terri McClanahan, Ferdous Gheyas, Marco Hernandez, Wei Ding, Luquan Wang, Jonathan Greene, Weihong Jin, Paul Kirschmeier & Jessie English
doi:10.1038/87074
Full text | PDF (29K)
Farnham, Peggy
Use of chromatin immunoprecipitation to study transcriptional deregulation in cancer cells p53
Peggy Farnham, Carrie Graveel, Antonis Kirmizis, Stephanie Bartley, Alexander Kel, Olga Kel-Margoulis, Edgar Wingender, Michael Zhang, Tim Jatkoe & Steven Madore
doi:10.1038/87076
Full text | PDF (29K)
Fox, Jay
Melanoma gene expression during matrix degradation and contraction pp53 - 54
Jay Fox, Paul Gallagher, Bao Yongde, Roswitha Nischt & Cornelia Mauch
doi:10.1038/87078
Full text | PDF (37K)
Frengen, Eirik
A high-resolution integrated map of the breast cancer loss of heterozygosity region on human chromosome 16q22.1 p54
Eirik Frengen, Philippe Rocca-Serra, Sergey Shaposhnikov, Laurence Taine, Jim Thorsen, Azza Abd El Monéim, Michel Longy, Hans Prydz & Françoise Dorion-Bonnet
doi:10.1038/87080
Full text | PDF (27K)
Fruehauf, John
New approaches to antiangiogenesis therapy of solid tumors p54
John Fruehauf, Eugene Mechetner, Shubhra Mittal, Bejan Shabharhami, Deborah Pavich, Lilian Tee & Carina Torres
doi:10.1038/87082
Full text | PDF (27K)
Fung, Eric
Ciphergen ProteinChip technology: A platform for protein profiling and biomarker identification p54
Eric Fung
doi:10.1038/87084
Full text | PDF (27K)
Gangi, Lisa
Gene expression in prostate cancer: microarray analysis of tumor specimens from African American and Caucasian patients p55
Lisa Gangi, Garrison Owens, Walter Rayford, Edison Liu & David Munroe
doi:10.1038/87086
Full text | PDF (27K)
Gavin, Mark
Control of exit from G1 and S phases of the cell cycle by histone deacetylase−Rb-hSWI/SNF and Rb-hSWI/SNF repressor complexes p55
Mark Gavin, Steve Zhang, Anjali Dahiya, Robin Luo, Antonio Postigo, Duanduan Ma, William Harbour & Douglas Dean
doi:10.1038/87088
Full text | PDF (27K)
Giannella-Neto, Daniel
Identification of protein-tyrosine kinase catalytic domain conserved sequences in the ORF expressed sequence tags database p55
Daniel Giannella-Neto, Maria Lúcia C. Correa, Ana Mercedes S. Cavaleiro-Luna, Maria Angela H.Z. Fortes, Cassio N. Coimbra, Leonardo S. Oliveira, Sandro J. De Souza & Andrew J.G. Simpson
doi:10.1038/87090
Full text | PDF (27K)
Gieseg, Michael
Expression profiling renal tumors as a first step in the evaluation of tumor models pp55 - 56
Michael Gieseg, Mark Rubin, Theresa Cody & Eric Kaldjian
doi:10.1038/87092
Full text | PDF (37K)
Gillanders, E.
Use of experimentally constructed haplotypes in gene mapping studies of hereditary cancers p56
E. Gillanders, J.A. Douglas, S.B. Gruber, H. Yan, B. Vogelstein, R. Sood, J. Carpten, T. Dennis, M. Boehnke & J.M. Trent
doi:10.1038/87094
Full text | PDF (29K)
Gokgoz, Nalan
Analysis of gene expression patterns in breast cancer by microarray technology p56
Nalan Gokgoz, Xiang Sun, Shelly Bull, Jim Woodgett & Irene Andrulis
doi:10.1038/87096
Full text | PDF (29K)
Golubic, Mladen
Genetic basis of radiation response in glioblastoma multiforme pp56 - 57
Mladen Golubic, Olga Chernova, LesleyAnn Hawthorn, Sofia Chernova, James Evans, Kathy Signorelli, John Cowell & Gene Barnett
doi:10.1038/87098
Full text | PDF (41K)
Grandori, Carla
Gene expression profiles at various stages of lymphomagenesis in Em-myc transgenic mice p57
Carla Grandori, Brian Iritani & Robert Eisenman
doi:10.1038/87100
Full text | PDF (31K)
Graveel, Carrie
Analysis of gene expression alterations in mouse and human hepatocellular carcinomas p57
Carrie Graveel, Tim Jatkoe, Steve Madore, Alison Holt & Peggy Farnham
doi:10.1038/87102
Full text | PDF (31K)
Gregg, Jeff
Molecular profiling of a mouse model for metastatic breast carcinoma p57
Katti Jessen, Stephenie Liu, Larry Yong, Robert Cardiff & Jeffrey Gregg
doi:10.1038/87104
Full text | PDF (31K)
Hager, Jeff
Genomics of islet cell carcinogenesis pp57 - 58
Jeff Hager, Graeme Hodgson, Colin Collins, Fong-Ying Tsai, Dennis Huszar, Joe Gray & Douglas Hanahan
doi:10.1038/87106
Full text | PDF (41K)
He, Huiling
Gene expression analysis of glucocorticoid-induced apoptosis by a gene microarray technique p58
Huiling He, Michael Malone, Steven Ostrowski & Clark Distelhorst
doi:10.1038/87108
Full text | PDF (28K)
Hedenfalk, Ingrid
Classification of hereditary breast cancers based on gene expression p58
Ingrid Hedenfalk, Yidong Chen, David Duggan, Åke Borg & Jeffrey Trent
doi:10.1038/87110
Full text | PDF (28K)
Hegi, Monika
Molecular pathways in human glioblastoma assessed by gene expression profiling pp58 - 59
Monika Hegi, Michimasa Nozaki, Martin Labuhn, Roger Stupp, Annie-Claire Diserens, Marie-France Hamou, Adrian Merlo, Nicolas de Tribolet & Sophie Godart
doi:10.1038/87112
Full text | PDF (38K)
Helou, Khalil
The Hgfr/Met oncogene is the target for gene amplification in DMBA-induced rat sarcomas p59
Khalil Helou, Anna Walentinsson, Marija Kost-Alimova & Göran Levan
doi:10.1038/87114
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Hermann, Thomas
Effects of the RXR-specific ligand Targretin on gene expression in carcinogen-induced mammary tumors in the rat p59
Thomas Hermann, Patricia Tooker, Martin Seidel & William Lamph
doi:10.1038/87116
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Herrmann, John
A genomics approach to therapeutic antibody target discovery p59
John Herrmann, Luca Rastelli, Elma Fernandes, Catherine Burgess, William LaRochelle, Henri Lichenstein & Rick Shimkets
doi:10.1038/87118
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Hester, Susan
Studies of normal gene expression in the rat nasal epithelium using cDNA array technology pp59 - 60
Susan Hester, Gina Benavides, Maureen Sartor, Lawrence Yoon, Kevin Morgan & Douglas Wolf
doi:10.1038/87120
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Holzmann, Klaus
Kinetics of expression analysis during myc-mediated apoptosis p60
Klaus Holzmann, Chantal Schamberger, Gerlinde Schmidt, Barbara Skrzypek, Soleman Sasgary & Christa Cerni
doi:10.1038/87122
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Huang, Kuan-Chun
Global RNA expression analysis of primary and recurrent ovarian tumors p60
Kuan-Chun Huang, Samuel Mok, Ross Berkowitz & Ng Shu-Wing
doi:10.1038/87124
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Huang, Tim Hui-Ming
Dissecting complex genetic and epigenetic alterations in cancer genomes using CpG island microarrays pp60 - 61
Tim Hui-Ming Huang, Huidong Shi, Farah Rahmatpanah & Pearlly Yan
doi:10.1038/87126
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Huminiecki, Lukasz
In silico cloning of new endothelial-specific genes p61
Lukasz Huminiecki & Roy Bicknell
doi:10.1038/87128
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Ignatovich, Irina A.
Suicide effect of herpesvirus thymidine kinase gene delivered into human hepatoma cells in complex with oligopeptides p61
Irina A. Ignatovich, Ella B. Dizhe, Sergej V. Burov, Boris N. Akifiev & Andrej A. Perevozchikov
doi:10.1038/87130
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Inoue, Norimitsu
Determination of the breakpoints of a chromosomal translocation found in a patient with paroxysmal nocturnal hemoglobinuria p61
Norimitsu Inoue, Tomohisa Izui, Maki Kuwayama, Junichi Nishimura, Ken Kurokawa, Takashi Machii, Yuzuru Kanakura & Taroh Kinoshita
doi:10.1038/87132
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Jain, Ajay
An analytical framework and data system for analyzing megavariate biological data in cancer p62
Ajay Jain, Chris Kingsley & Adam Olshen
doi:10.1038/87134
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Jazaeri, Amir
Gene expression profiles of low- and high-grade papillary serous ovarian carcinomas using cDNA microarray analysis p62
Amir Jazaeri, Karen Lu, Christos Sotiriou, Nawal Alkharouf, David Gershenson & Edison Liu
doi:10.1038/87136
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Jeffs, Aaron
Microarray analysis of colorectal cancer cell lines p62
Aaron Jeffs, Sharon Pattison, Junjie Xu & Anthony Reeve
doi:10.1038/87138
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Joseph, Pius
Gene expression in BALB/c-3T3 cells transformed with beryllium p62
Pius Joseph & Tong-man Ong
doi:10.1038/87140
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Kallioniemi, Anne
High-resolution CGH analysis on cDNA microarrays for direct identification of amplification target genes p63
Elizabeth Hyman, Outi Monni, Ester Rozenblum, Spyro Mousses, Michael Bittner, Yidong Chen, Olli Kallioniemi & Anne Kallioniemi
doi:10.1038/87142
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Kaminski, Naftali
A composite genomic profile of lung cancer in smokers and nonsmokers p63
Naftali Kaminski, David Pilzer, Gady Cojocaru1, Ofer Margalit, Nir Friedman, Shlomit Reinstein, David Simansky, Penina Yaron, Amariglio Ninnete, Alon Yellin, Gideon Rechavi, Eitan Friedman & Meir Krupsky
doi:10.1038/87144
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Kannan, Karuppiah
Primary and secondary target genes regulated by p53 identified by DNA microarrays p63
Karuppiah Kannan, Ninette Amariglio, Gideon Rechavi, Yasmin Yaakov, Naftali Kaminski, Gad Getz, Eitan Domany & David Givol
doi:10.1038/87146
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Kasai, Masataka
Acceleration of cell division independent of increases in cell mass p64
Masataka Kasai, Hiroko Sato, Reiko Ishida, Katsunori Aoki & Haruo Okado
doi:10.1038/87148
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Khan, Javed
Development of a molecular taxonomy of small blue round-cell tumors using cDNA microarrays p64
Javed Khan, Jun Wei, Lao Saal, Ladanyi Marc, Ringnér Markus, Carsten Peterson, Yidong Chen & Paul Meltzer
doi:10.1038/87150
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Kinoshita, Ichiro
Identification of genes regulated by AP-1 in Rat-1a cells expressing inducible cJun p64
Ichiro Kinoshita, Virna Leaner, Motoo Katabami, Denver Hendricks, Rammon Manzano, Aaron Bell, Paul Dent & Michael Birrer
doi:10.1038/87152
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Kirsch, Ilan
The Cancer Chromosome Aberration Project: Update on BAC clone repository and database pp64 - 65
Ilan Kirsch, Raluca Yonescu, Theresa Brown, Tricia Reppert, Turid Knutsen, Karl Sirotkin & Thomas Ried
doi:10.1038/87154
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Klein, Christoph
Transcriptome and genome analysis of single disseminated tumor cells: approach to study minimal residual cancer p65
Christoph Klein, Stefan Seidl, Karina Petat-Dutter, Oleg Schmidt-Kittler, Sonja Offner & Gert Riethmüller
doi:10.1038/87156
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Krahe, Ralf
Gene expression profiling reveals fundamental biological differences in AML with trisomy 8 and normal cytogenetics p65
Kimmo I. Virtaneva, Fred A. Wright, Stephan M. Tanner, Bo Yuan, William J. Lemon, Michael A. Caligiuri, Clara D. Bloomfield, Albert de la Chapelle & Ralf Krahe
doi:10.1038/87158
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Krupke, Debra M.
Electronic access to data from mouse cancer models: The Mouse Tumor Biology database pp65 - 66
Debra M. Krupke, Carol J. Bult, Dieter Naf, John P. Sundberg & Janan T. Eppig
doi:10.1038/87160
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Kuzumaki, Noboru
Epigenetic silencing of the tumor-suppressing gelsolin gene involves histone deacetylation of its promoter region in human urinary bladder cancer p66
Kazunori Haga, Hisakazu Fujita, Ataru Sazawa, Masato Takimoto, Nobuo Shinohara, Tomohiko Koyanagi & Noboru Kuzumaki
doi:10.1038/87162
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Lacher, Markus
Wnt-Frizzled signaling in cell proliferation and survival p66
Markus Lacher & Robert Friis
doi:10.1038/87164
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Larson, Garry P.
Identification of disease gene variants based on gene−gene interactions p66
Garry P. Larson, Louis Geller & Theodore Krontiris
doi:10.1038/87166
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Lau, Ching
Identification of a new fusion of ETV6/TEL and NTRK3/TRKC in a primitive neuroectodermal tumor p67
Xiao-Nan Li, Charles Harris, Xin-Yan Lu, Pulivarthi Rao & Ching Lau
doi:10.1038/87168
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Lee, Ann
Identification of genes differentially expressed in breast cancer cells treated with tamoxifen, using microarray-based expression profiling p67
Ann Lee, Anand Krishnasamy, Richard Epstein & Ga Sze Hong
doi:10.1038/87170
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Leszczynski, Dariusz
Proteomics: new way to to determine possible biological effects of mobile phone radiation p67
Dariusz Leszczynski & Sakari Joenväärä
doi:10.1038/87172
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Lin, Lin
Identification and characterization of a 19q12 amplicon in esophageal adenocarcinomas using two-dimensional genomic scanning and amplification mapping of sequence tagged sites pp67 - 68
Lin Lin, Michael Prescott, Rork Kuick, Samir Hanash, Mark Orringer, Thomas Glover & David Beer
doi:10.1038/87174
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Linder, Stig
Classification of human ovarian tumors using multivariate data analysis of polypeptide expression patterns p68
Ayodele Alaiya, Bo Franzen, Anders Hagman, Stig Linder & Gert Auer
doi:10.1038/87176
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Ling, Zhang
Cloning and analyzing 5' flanking sequences of a tissue-specifically expressed gene derived from mouse nasopharynx p68
Ling Zhang, Kaitai Yao, Ke Lan, Hong Li, Xiangling Feng, Zhiwei He & Weinong Han
doi:10.1038/87178
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Lingen, Mark
Molecular profiling of anti-angiogenic agents p68
Edith I. Cline, Silvio Bicciato & Mark Lingen
doi:10.1038/87180
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Lingle, Wilma
Investigation of gene expression correlating with centrosome amplification in development and progression of breast cancer p69
Wilma Lingle, Stephen Iturria, Patrick Roche, Fergus Couch, James Ingle, Youzhen Wang, Kathleen Steinmann, Yong Yao Xu, Maureen Mertens, Yueying Cao & James Lillie
doi:10.1038/87182
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Linja, Marika
Quantification of androgen receptor gene expression in prostate carcinomas with a real-time RT-PCR assay p69
Marika Linja, Kimmo Savinainen, Outi Saramäki, Teuvo Tammela & Tapio Visakorpi
doi:10.1038/87184
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Liu, Hsiao-Ching
Growth hormone interacts with the Marek's disease virus SORF2 protein and is associated with disease resistance in chicken p69
Hsiao-Ching Liu, Hsing-Jien Kung, Janet Fulton, Robin Morgan & Hans Cheng
doi:10.1038/87186
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Los, Gerrit
Unique expression patterns for paclitaxel, doxorubicin and cisplatin in breast carcinoma cells p70
Fei Yang, Gerald Manorek & Gerrit Los
doi:10.1038/87188
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Lucito, Robert
Detection of gene copy number fluctuations with microarrays using genomic representations p70
Robert Lucito, Joan Alexander, Seth Rostan, Joseph West & Michael Wigler
doi:10.1038/87190
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Lushnikova, Tamara
DNA copy number changes in epithelioid sarcoma and its variants p70
Tamara Lushnikova, Knuutil Sakari & Miettinen Markku
doi:10.1038/87192
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Madden, Stephen
Transcriptome annotation of genomes using SAGE p70
Stephen Madden, Brian Cook, Mindy Zhang, Clarence Wang & Katherine Klinger
doi:10.1038/87194
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Magee, Jeffrey
Expression profiling of androgen target genes in prostate cancer p71
Jeffrey Magee, Sushama Patil & Jeffrey Milbrandt
doi:10.1038/87196
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Mahadevappa, Mamatha
Dissecting oral cancer through large-scale gene expression profiling of laser capture microdissection samples p71
Mamatha Mahadevappa, Ilias Alevizos, Hiroe Ohyama, Xue Zhang, Yokho Kohno, Marshall Posner, George Gallagher, Bruce Donoff, Randy Todd, David Wong & Janet Warrington
doi:10.1038/87198
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Mariani, Luigi
P311 and DAP3: Glioblastoma invasion genes identified by laser capture microdissection, differential display and QRT-PCR p71
Luigi Mariani, Wendy McDonough, Christian Beaudry, Dominique Hoelzinger, Elzbieta Kaczmarek, Alf Giese, Stephen Coons, Rolf Seiler, Kristen Ross & Michael Berens
doi:10.1038/87200
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Martinez, Maria Elena
Effect of 677 C to T mutations in the methylenetetrahydrofolate reductase gene, folate intake and plasma homocysteine on adenoma recurrence p72
Maria Elena Martinez, Janine Einspahr, Jean-Pierre Issa, Anna Giuliano, Fred Kadlubar & David S. Alberts
doi:10.1038/87202
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Masys, Daniel
Use of controlled terminology hierarchies to detect common characteristics of genes within expression clusters p72
Daniel Masys, John B. Welsh, J. Lynn Fink, Michael Gribskov, Igor Klacansky & Jacques Corbeil
doi:10.1038/87204
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McNiel, Elizabeth A.
Characterization of cytogenetic aberrations in feline vaccine-associated sarcoma p72
Elizabeth A. McNiel, Eric A. Hoots, Diane B. Vannais, Charles A. Waldren & Susan M. LaRue
doi:10.1038/87206
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Medico, Enzo
A genome-wide trap screening procedure for transcriptionally responsive genes p73
Enzo Medico, Alessandra Gentile, Philippe Soriano & Paolo Comoglio
doi:10.1038/87208
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Mendez, Eduardo
Genomic-scale genetic expression profiles of oral cancers p73
Eduardo Mendez & Chen Chu
doi:10.1038/87210
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Merajver, Sofia
Microarray analysis of RhoC-transformed mammary epithelial cells suggests molecular mechanisms of inflammatory breast cancer p73
Sofia Merajver, Zhi-Fen Wu, Tammy Chang, Hamid Mirshahidi, Paul Meltzer & Kenneth vanGolen
doi:10.1038/87212
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Miller, Lance
Silencing of Wnt signaling and activation of multiple metabolic pathways in response to cell proliferation stimulated by thyroid hormone p74
Lance Miller, Kyung Soo Park, Qingbin Guo, Nawal Alkharouf, Renae Malek, Norman Lee, Edison Liu & Sheue-yann Cheng
doi:10.1038/87214
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Monni, Outi
17q23 amplification in breast cancer leads to overexpression of multiple genes p74
Outi Monni, Maarit Barlund, Juha Kononen, Guido Sauter, Olli Kallioniemi & Anne Kallioniemi
doi:10.1038/87216
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Montpetit, Alexandre
A detailed transcript map of the human chromosome 12p12.3 tumor suppressor locus: the usefulness of an integrative approach p74
Alexandre Montpetit, Nathalie Trudel & Daniel Sinnett
doi:10.1038/87218
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Mousses, Spyro
Gene expression changes during hormonal therapy for prostate cancer reveal candidate diagnostic and drug targets p75
Spyro Mousses, Lukas Bubendorf, Juha Kononen, Yidong Chen, Micheal Bittner, Pasi Koivisto, Jane Trepel, Jin Woo Kim, Mark Raffeld, Thomas Pretlow, Natalie Goldberger, Robert Cornelison, Urs Wagner, Galen Hostetter, Guido Sauter & Olli Kallioniemi
doi:10.1038/87220
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Mutter, George L.
Expression signatures of high- and low-metastatic-risk lymph-node-negative premenopausal breast cancers p75
George L. Mutter, Jan P. A. Baak, Gregory Kust, Jeff T. Fitzgerald, Robert Gray & Donna Neuberg
doi:10.1038/87222
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Myklebost, Ola
Microarray-based analysis of gene activity patterns in osteosarcoma p75
Anne Forus, Javed Khan, Ola Myklebost & Paul S. Meltzer
doi:10.1038/87224
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Norman, Sylvia
Analysis of TP53 mutations in human malignant gliomas p76
Sylvia Norman, Adrienne Scheck & Jeff Braman
doi:10.1038/87226
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Novoradovskaya, Natalia
Using universal human reference RNA in microarray gene expression studies p76
Natalia Novoradovskaya, Nicki Chin, Terry Payette, Alexander Pergamenschikov, Michael Fero, David Botstein & Jeff Braman
doi:10.1038/87228
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Nuchtern, Jed
cDNA microarray analysis of differential gene expression in MYCN-amplified neuroblastoma tumor cells p76
Jed Nuchtern, Jason Shohet, Susan Stuart, M. John Hicks & Susan Burlingame
doi:10.1038/87230
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O'Connor, Maureen
Identification of genes that are differentially expressed in response to EGF receptor signaling in A549 lung cancer cells using a combination of suppression subtractive hybridization and microarrays pp76 - 77
Maureen O'Connor, Alain Guimond, Christiane Cantin & Joanne Magoon
doi:10.1038/87232
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Onay, U. Venus
Identifying the role of single-nucleotide polymorphisms in breast cancer risk using microarray and mass spectrometry technologies p77
U. Venus Onay, A. Julia Knight & Hilmi Ozcelik
doi:10.1038/87234
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Orr, Michael
Discovery of 830 candidate therapeutic targets and diagnostic markers for breast cancer using oligonucleotide microarray technology p77
Michael Orr, Amanda Williams, Lisa Vogt, Joseph Boland, Harry Yang, Jeffrey Cossman & Uwe Scherf
doi:10.1038/87236
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Parodi, Silvio
Innovative leads for antineoplastic drugs suggested by a more intimate familiarity with structural motifs of oncoproteins pp77 - 78
Maria Pia Pescarolo, Luca Bagnasco, Davide Malacarne, Antonella Melchiori, Piera Valente, Enrico Millo, Silvia Bruno, Stefania Basso & Silvio Parodi
doi:10.1038/87238
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Paules, Richard S.
ATM-dependent responses to DNA-damaging agents p78
Richard S. Paules, Cynthia L. Innes, Stella O. Sieber, Rodney E. Shackelford, Alexandra N. Heinloth, Paula B. Deming, Cheryl A. Cistulli, Lee Bennett, Pierre R. Bushel, Cynthia A. Afshari & William K. Kaufmann
doi:10.1038/87240
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Pedersen, Tanja X.
Profiling changes in keratinocyte gene expression during wound reepithelialization by laser capture microdissection combined with cDNA array analysis p78
Tanja X. Pedersen, Chichadnok Leethanakul, Vyomesh Patel, David Mitola, Keld Danø, Morten Johnsen, J. Silvio Gutkind & Thomas H. Bugge
doi:10.1038/87242
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Perry, Mary Ellen
Conditional inactivation of Mdm2 pp78 - 79
Mary Ellen Perry & Susan Mendrysa
doi:10.1038/87244
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Peters, Mette A.
Genome-wide scan for high-risk prostate cancer families with breast cancer reveals new loci for prostate cancer and breast cancer p79
Mette A. Peters, Janet L. Stanford, Mike D. Badzioch, Suzanne Kolb, Marta Janer, Ellen L. Goode, Mark Gibbs, Leroy Hood, Elaine A Ostrander & Gail P. Jarvik
doi:10.1038/87246
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Petros, John
Classification of adult renal epithelial neoplasms by gene expression profiling using cDNA microarrays p79
Petros John, Andrew Young, Mahul Amin, So-Dug Lim, Fray Marshall, James Madara & Andrew Neish
doi:10.1038/87248
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Plaschke, Jens
Near-complete association between microsatellite instability and abnormal immunostaining of the mismatch repair proteins hMSH2, hMSH6, hMLH1 and hPMS2 and involvement of hMSH6 in sporadic and hereditary colorectal cancers pp79 - 80
Jens Plaschke, Stefan Krüger, Stephan Haas, Steffen Pistorius, Hans-D. Saeger & Hans K. Schackert
doi:10.1038/87250
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Plass, Christoph
Contribution of DNA methylation to oncogenesis: Results of a genome scanning approach in multiple human tumors p80
Christoph Plass, Michael C. Frühwald, Laura J. Rush, Zunyan Dai, Laura T. Smith & Dominic J. Smiraglia
doi:10.1038/87252
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Pollock, Pamela M.
Mutation analysis of the CDKN2A promoter in Australian melanoma families p80
Pamela. M. Pollock, Mitchell Stark, Jane M. Palmer, Marilyn K. Walters, Nick G. Martin, Adele C. Green & Nicholas K. Hayward
doi:10.1038/87254
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Porkka, Kati
Detection of a new, prostate-specific gene by using suppression subtractive hybridization and cDNA library arrays pp80 - 81
Kati Porkka & Tapio Visakorpi
doi:10.1038/87256
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Porter, Peggy L.
Allelic imbalance in routinely processed breast tumors determined by affymetrix HuSNP array p81
Elizabeth Schubert, Laura Cousens, Li Hsu, Jeri Glogovac, Brian Reid, Steve Self, Peter Rabinovich & Peggy Porter
doi:10.1038/87258
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Randazzo, Filippo
Cancer pathway analysis, DNA microarrays, and the identification of therapeutic targets p81
Filippo Randazzo, Pablo Garcia, Joel Berger, Anna Kelly, John Fuller, Pauline Lee, James Stephans, Mark Boyle, Eddie Moler, Eric Dahlstrom, Mala Sinha, Christoph Reinhard, Robert Warren, Emily Bergsland, Terry Brentnall, Mary Bronner, Mark van der Laan, Katie Pollard, Rusty Williams & Jaime Escobedo
doi:10.1038/87260
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Ratner, Nancy
Gene expression analysis of NF1 mutant Schwann cells p81
Nancy Ratner, Shyra Miller & Jeffrey DeClue
doi:10.1038/87262
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Reboul, J.
The gene number dilemma: Direct evidence for at least 19,000 protein-encoding genes in C. elegans and implications for the human genome p82
J. Reboul, P. Vaglio1, N. Tzellas, C. Jackson, T. Moore, Y. Kohara, J. Thierry-Mieg, D. Thierry-Mieg, J. Hitti, L. Doucette-Stamm, J. Hartley, G. Temple, M. Brasch, D.E. Hill & M. Vidal
doi:10.1038/87264
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Reeve, Anthony
Microarray analysis of colorectal cancer cell lines p82
Aaron Jeffs, Sharon Pattison, Junjie Xu & Anthony Reeve
doi:10.1038/87266
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Riggins, Gregory J.
Comprehensive gene expression analysis as a tool for hunting cancer genes p82
Gregory J. Riggins, Anita Lal, W. Troy Loging & Robert L. Strausberg
doi:10.1038/87268
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Ringner, Markus
A layered perceptron approach to categorizing cDNA microarray measurements p83
Markus Ringner, Carsten Peterson, Sofia Gruvberger, Mårten Fernö, Åke Borg, Javed Khan, Jun Wei, Lao Saal, Yidong Chen, Marc Ladanyi, Paul S. Meltzer & Jeff M. Trent
doi:10.1038/87270
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Romagnolo, Donato
Microarray expression profiles in breast cancer MCF-7 cells following exposure to benzo[a]pyrene and its diol epoxide p83
Donato Romagnolo, Brandon Jeffy, David Samuelson & Claire Payne
doi:10.1038/87272
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Sakamoto, Kathleen
Protechials: A novel approach to pharmacological inhibition of protein function p83
Kathleen Sakamoto, Raymond Deshaies & Craig Crews
doi:10.1038/87274
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Salceda, Susana
Identification of differentially expressed genes in breast cancer pp83 - 84
Susana Salceda, Carrie Drumright, Anthony DiEgidio, Brandon Liang, Ping Hu, Yongming Sun, Vu Viet Hoang, Andrei Munteanu, Herve Recipon, Robert Cafferkey & Roberto A. Macina
doi:10.1038/87276
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Samatar, Ahmed
Identification of TGF-betaII as a transcriptional target of Akt p84
Ahmed Samatar, Suxing Liu, Luquan Wang, Marnie McMguirk, Murali Ramachandra & Chandra Kumar
doi:10.1038/87278
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Samimi, Goli
Gene expression profiling of oxaliplatin-resistant cell lines p84
Goli Samimi, Jim Breaux, Misako Mishima, Charles Berry, Stephen Howell & Gerrit Los
doi:10.1038/87280
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Sanchez-Carbayo, Marta
Expression profiling of osteosarcoma-transfected cells with MDR1 and NEO p84
Marta Sanchez-Carbayo, Thomas Belbin, Geoffrey Childs, Katia Scotlandi, Nicola Baldini & Carlos Cordon-Cardo
doi:10.1038/87282
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Schmidt-Kittler, Oleg
Whole-genome analysis of single disseminated tumor cells isolated from bone marrow of breast cancer patients p85
Oleg Schmidt-Kittler, Angela Daskalakis, Andre Ahr, Julie Waldispuhl & Christoph Klein
doi:10.1038/87284
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Schnitzer, Jan
Vascular oncoproteomics for tissue-specific targeting and overcoming barriers to drug and gene delivery in vivo p85
Jan Schnitzer
doi:10.1038/87286
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Schubert, Elizabeth
Allelic imbalance in routinely processed breast tumors determined by Affymetrix HuSNP array p85
Elizabeth Schubert, Laura Cousens, Li Hsu, Jeri Glogovac, Brian Reid, Steve Self, Peter Rabinovich & Peggy Porter
doi:10.1038/87288
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Schulze, Almut
Analysis of the transcriptional program induced by Raf in epithelial cells p85
Almut Schulze, Kerstin Lehmann, Harold B. Jefferies, Martin McMahon & Julian Downward
doi:10.1038/87290
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Shoshan, Maria
Cisplatin induces the pro-apoptotic conformation of bak in a delta-MEKK1-dependent manner p86
Aleksandra Mandic, Kristina Viktorsson, Johan Hansson, Stig Linder & Maria Shoshan
doi:10.1038/87292
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Shoshan, M.C.
BAK, BAX and p53 proteins in the apoptotic response to cisplatin p86
A. Mandic, K. Viktorsson, M. Varsanyi, J. Hansson, S. Linder & M.C. Shoshan
doi:10.1038/87294
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Sinibaldi, Dominic
Defining a molecular fingerprint of STAT3-regulated genes associated with oncogenesis using microarray technology and novel statistical methods p86
Dominic Sinibaldi, Roy Garcia, Greg Bloom, Shrikant Mane, Peter Geiser, Susan Minton, Carlos Muro-Cacho, Emmanuel Lazaridis & Richard Jove
doi:10.1038/87296
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Sinnett, Daniel
A detailed transcript map of the human chromosome 12p12.3 tumor suppressor locus: the usefulness of an integrative approach pp86 - 87
Alexandre Montpetit, Nathalie Trudel & Daniel Sinnett
doi:10.1038/87298
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Sjögren, Helene
Fusion of the NH2-terminal domain of the bHLH protein TCF12 to TEC in extraskeletal myxoid chondrosarcoma with translocation t(9; 15)(q22; q21) p87
Helene Sjögren, Barbro Wedell, Jeanne M. Meis Kindblom, Lars-Gunnar Kindblom & Göran Stenman
doi:10.1038/87300
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Smith, David I.
Comprehensive analysis of genetic alterations in ovarian cancer p87
Viji Shridhar, Ajay Pandita, John Lee, Steve Iturria, Julie Staub, Raji Avula, Ami Sen, Eric Calhoun, Fergus Couch, David James, Lynn Hartmann, Jim Lillie & David Smith
doi:10.1038/87304
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Sood, Raman
Use of experimentally constructed haplotypes in gene mapping studies of hereditary cancers pp87 - 88
E. Gillanders, J.A. Douglas, S.B. Gruber, H. Yan, B. Vogelstein, R. Sood, J. Carpten, T. Dennis, M. Boehnke & J.M. Trent
doi:10.1038/87306
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Molecular cloning and expression analysis of human and mouse homologs of a new transcriptional regulator as a candidate tumor suppresor gene p88
Raman Sood, Izabela Makalowska, Pamela Pollock, Christiane Robbins, Suzie Chen & Jeffrey Trent
doi:10.1038/87308
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Sorensen, Poul H.B.
Ewing tumor cells activate distinct signaling pathways in monolayer versus anchorage-independent cultures p88
Elizabeth R. Lawlor, Jerian F. Lim, Lydia A. Taylor, Chris Carthy & Poul H.B. Sorensen
doi:10.1038/87310
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Sotiriou, Christos
Core biopsy versus surgical tumor specimens for microarray analysis of gene expression profiles pp88 - 89
Christos Sotiriou, Khanna Chand, David Petersen, Amir A. Jazaeri & Edison T. Liu
doi:10.1038/87312
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Stenman, Göran K.D.
Fusion of the NH2-terminal domain of the bHLH protein TCF12 to TEC in extraskeletal myxoid chondrosarcoma with translocation t(9;15)(q22;q21) p89
Helene Sjögren & Göran K.D. Stenman
doi:10.1038/87314
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Stephan, D.A.
Identification of expression changes of prognostic and therapeutic value in metastasizing medulloblastoma p89
K.M. Brown, T. MacDonald, P.H. Cogen, Y.-W. Chen, K. Peterson, Y. Chen, B. Rood, R.J. Packer & D.A. Stephan
doi:10.1038/87316
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Sulman, Erik P.
Identification of candidate tumor suppressor genes in meningioma by regional expression profiling p89
Erik P. Sulman, Peter S. White, Jan P. Dumanski, John M. Maris & Garrett M. Brodeur
doi:10.1038/87318
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Sutphin, Patrick D.
Application of supervised machine learning to identify genes associated with the hypoxia response p90
Patrick D. Sutphin, Soumya Raychaudhuri, Nicholas C. Denko, Russ B. Altman & Amato J. Giaccia
doi:10.1038/87320
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Suxing, Liu
Genome-wide gene expression analysis of human breast cancer cells p90
Suxing Liu, Qun Wu, Paul Kirschmeier, Terri McClanahan, Wei Ding, Ferdous Gheyas, Luquan Wang, Marco Hernandez & Jonathan Greene
doi:10.1038/87322
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Takahashi, Yasuo
Thymidylate synthase expression correlates closely with E2F1 expression in primary colon cancer p90
Yasuo Takahashi, Toshihito Nagata, Yukimoto Ishii, Satoshi Asai & Koichi Ishikawa
doi:10.1038/87324
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Tanenbaum, David
High-throughput genomic analysis of small-cell lung cancer: allelotyping using Affymetrix HuSNP arrays p90
David Tanenbaum, Kerstin Lindblad-Toh, Eric Lander & Matthew Meyerson
doi:10.1038/87326
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Tast, David
Corning introduces a new technology for mass production of microarrays p91
David Tast, Vic Myer, Mary Trounstine & Laurent Picard
doi:10.1038/87328
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Tonko, Martin
Gene expression profiling of leukemia cells during glucocorticoid-induced apoptosis p91
Martin Tonko, Roman Crazzolarar, Anita Kofler, David Bernhard, Albert Amberger, Bernhard Meister & Reinhard Kofler
doi:10.1038/87330
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Toshihito, Nagata
High level of hCDC10 gene expression in neuroblastoma may be associated with favorable tumor characteristics p91
Nagata Toshihito, Takahashi Yasuo, Asai Satoshi, Mugishima Hideo, Koshinaga Shigemichi & Ishikawa Koichi
doi:10.1038/87332
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Uchida, Kazuhiko
Whole-chromosome imbalance pattern of comparative genomic hybridization in neuroblastomas is associated with regressive disease from mass screening cases showing spontaneous regression p91
Kazuhiko Uchida, Misako Hirai, Sadao Yoshida, Hironobu Kashiwagi, Saito Soichiro, Michio Kaneko, Ohkawa Haruo, Akira Nakagawara & Miwa Masanao
doi:10.1038/87334
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van der Pluijm, Gabri
Monitoring metastatic behavior of human breast cancer cells in mice with species-specific PCR and bioluminescent reporter imaging p92
G. van der Pluijm, A. Wetterwald, B. Sijmons, E. Gautschi, I. Que, B. Stadler, G. Thalmann, M. Cecchini & C. Löwik
doi:10.1038/87336
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Vandesompele, Jo
Integration of suppression subtractive hybridization, laser capture microdissection and microarray analysis for identification of genes implicated in neuroblastoma pathogenesis p92
Jo Vandesompele, Nadine Van Roy, Geneviève Laureys, Katleen De Preter, Geert Berx, Kristin Strumane, Anne De Paepe, Frans Van Roy & Frank Speleman
doi:10.1038/87338
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Quantification and normalization of gene expression using SYBR Green I real-time RT-PCR p92
Jo Vandesompele, Johanna Iso-Oja, Anne De Paepe & Frank Speleman
doi:10.1038/87340
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Varley, Jenny
Genotype and phenotype in carriers of germline TP53 mutations pp92 - 93
Jenny Varley, Gareth Evans, Jillian Birch & Anna Kelsey
doi:10.1038/87342
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Vidal, Marc
The gene number dilemma: direct evidence for at least 19,000 protein-encoding genes in Caenorhabditis elegans and implications for the human genome p93
David E. Hill, J. Reboul, P. Vaglio, N. Tzellas, C. Jackson, T. Moore, Y. Kohara, J. Thierry-Mieg, D. Thierry-Mieg, J. Hitti, L. Doucette-Stamm, J. Hartley, G. Temple, M. Brasch, D.E. Hill & M. Vidal
doi:10.1038/87344
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Villuendas, Raquel
Expression microarrays in the prediction of treatment resistance: The CNIO program p93
Raquel Villuendas, Jose Palacios, Manolo Morente, Orlando Dominguez, Javier Benitez & M.A. Piris
doi:10.1038/87346
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Vinals, Carla
Discovery of new potential antigens for cancer immunotherapy using "custom tissue" screening of a database of expressed sequence tags pp93 - 94
Carla Vinals, Swann Gaulis, Jean-Pol Cassart & Thierry Coche
doi:10.1038/87348
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Visvanathan, Jaya
Genomic aberrations in gastric adenocarcinoma p94
Jaya Visvanathan, Pulivarthi H. Rao, Christina Rudduck, Wai Keong Wong, Chow Yin Wong, Jean Ho, Choon Wei Wee, Oi Lian Kon & Dennis T.H. Lim
doi:10.1038/87350
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Volik, Stanislav
A 20q13.2 cancer amplicon: novel sequence analysis tools p94
Stanislav Volik, Joe Gray, David Kowbel & Colin Collins
doi:10.1038/87352
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Watson, Mark
Expression profiling of ductal carcinoma in situ by laser capture microdissection and high-density oligonucleotide arrays p94
Veronica Luzzi, Victoria Holtschlag & Mark Watson
doi:10.1038/87354
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Watts, George
Microarray analysis of a human multiple myeloma cell line selected with melphalan or doxorubicin identifies a set of commonly affected genes pp94 - 95
George Watts, Denise Tye, Mary Gleason-Guzman & Bernard Futscher
doi:10.1038/87356
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Weisz, Alessandro
Gene expression monitoring in hormone-responsive human breast cancer cells during estrogen-induced cell cycle progression p95
Luigi Cicatiello, Angelo Facchiano, Raffaele Calogero, Michele De Bortoli, Francesco Bresciani & Alessandro Weisz
doi:10.1038/87358
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Westbrook, Carol
A cDNA data set for expression studies of hematopoietic stem cells: characterization and database mining p95
Carol Westbrook, Ignatius Gomes, Tiffany Le, Jeffrey Kapp & Ronald Hoffman
doi:10.1038/87360
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Williams, Kathleen
Patent strategies and patent disputes: SNPs, diseases, and treatment p95
Kathleen Williams
doi:10.1038/87362
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Wolfl, Stefan
Screening of lung cancer samples using gene expression profiling p96
Stefan Wolfl, Larissa Odyvanova, Torsten Kroll, Jorg Sanger & Joachim Clement
doi:10.1038/87364
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Xiong, Momiao
Structural equation models for pathway identification p96
Momiao Xiong
doi:10.1038/87366
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Yakhini, Zohar
Statistical benchmarking and class discovery in gene expression data p96
Amir Ben-Dor, Nir Friedman & Zohar Yakhini
doi:10.1038/87368
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Yamazaki, Victoria
Efficient data mining of proteins involved in carcinogenesis by functional classification using Interpro pp96 - 97
Dunrui Wang, Victoria Yamazaki & Tom Tang
doi:10.1038/87370
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Yang, Ping
Neutrophil elastase gene in lung cancer development: evidence from molecular genetics and clinical epidemiology p97
Ping Yang, Ken Taniguchi, Claude Deschampes, Eric Bass, Rebecca Meyer & Wanguo Liu
doi:10.1038/87372
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Yang, Xiang-Jiao
Monocytic leukemia zinc-finger protein MOZ and its related factor MORF are new histone acetyltransferases p97
Nathalie Champagne, Nadine Pelletier & Xiang-Jiao Yang
doi:10.1038/87374
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Yeung, Ka Yee
Transcriptional analysis of Barrett's epithelium and normal gastrointestinal tissues p97
Ka Yee Yeung, Michael Barrett, Jeff Delrow, Patricia Blount, Brian Reid & Peter Rabinovitch
doi:10.1038/87376
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Yuan, Bo
Physical mapping and functional annotation of 60,000 human genes pp97 - 98
Degen Zhuo, Wei Zhao, Hee-Yung Yang, Jian-Ping Wang, Russell Sears, Do-Hun Kwon, David Gordon, Solomon Gibbs, Dai Dean, Troy Baer, Don Stredney, Al Stutz, Ralf Krahe, Fred Wright & Bo Yuan
doi:10.1038/87378
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Zarbl, Helmut
Patterns of gene expression in mammary cells following carcinogen exposure of strains of rat sensitive or resistant to carcinogenesis p98
Helmut Zarbl, Andrei Mikheev & Robert Sullivan
doi:10.1038/87380
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Zhao, Lue Ping
Toward rigorous assessment of statistical significance in functional genomics p98
Lue Ping Zhao & Jeff Thomas
doi:10.1038/87382
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Chen, Jianjun
Genome-wide analysis of gene expression in myeloid progenitor cells p98
Jianjun Chen, Sanggyu Lee, Janet D. Rowley & San Ming Wang
doi:10.1038/87384
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Jarjanazi, Hamdi
Trinucleotide repeat expansions in familial/sporadic breast/ovarian cancer: searching for novel predisposition genes p99
Hamdi Jarjanazi, Nalan Gokgoz, Irene L. Andrulis & Hilmi Ozcelik
doi:10.1038/87386
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