Supplementary information
From the following article:
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
Tarjei S. Mikkelsen, Manching Ku, David B. Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P. Koche, William Lee, Eric Mendenhall, Aisling O'Donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S. Lander & Bradley E. Bernstein
Nature 448, 553-560(2 August 2007)
doi:10.1038/nature06008
Supplementary Information
This file contains Supplementary Notes which includes the ChIP-Seq read requirement, genome coverage and accuracy and Supplementary Figures 1-10 with Legends
Supplementary Table 1
This file contains Supplementary Table 1 which includes the list of datasets analyzed.
Supplementary Table 2
This file contains Supplementary Table 2 which includes the primers for RT-PCR validation of ChIP-Seq.
Supplementary Table 3
This file contains Supplementary Table 3 which includes the list of analyzed promoters and their chromatin state in ES cells, neural progenitors and embryonic fibroblasts.
Supplementary Table 4
This file contains Supplementary Table 4 which includes the expression levels for analyzed genes in ES cells, neural progenitors and embryonic fibroblasts.
Supplementary Table 5
This file contains Supplementary Table 5 which includes the Gene Ontology categories associated with monovalent and bivalent promoters in ES cells.
Supplementary Table 6
This file contains Supplementary Table 6 which includes the chromatin state of promoters associated with known regulators or markers of differentiated cell types
Supplementary Table 7
This file contains Supplementary Table 7 which includes the allelic bias observed at verified or putative imprinting control regions.
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