Supplementary information

From the following article:

Comparative analyses of multi-species sequences from targeted genomic regions

J. W. Thomas, J. W. Touchman, R. W. Blakesley, G. G. Bouffard, S. M. Beckstrom-Sternberg, E. H. Margulies, M. Blanchette, A. C. Siepel, P. J. Thomas, J. C. McDowell, B. Maskeri, N. F. Hansen, M. S. Schwartz, R. J. Weber, W. J. Kent, D. Karolchik, T. C. Bruen, R. Bevan, D. J. Cutler, S. Schwartz, L. Elnitski, J. R. Idol, A. B. Prasad, S.-Q. Lee-Lin, V. V. B. Maduro, T. J. Summers, M. E. Portnoy, N. L. Dietrich, N. Akhter, K. Ayele, B. Benjamin, K. Cariaga, C. P. Brinkley, S. Y. Brooks, S. Granite, X. Guan, J. Gupta, P. Haghighi, S.-L. Ho, M. C. Huang, E. Karlins, P. L. Laric, R. Legaspi, M. J. Lim, Q. L. Maduro, C. A. Masiello, S. D. Mastrian, J. C. McCloskey, R. Pearson, S. Stantripop, E. E. Tiongson, J. T. Tran, C. Tsurgeon, J. L. Vogt, M. A. Walker, K. D. Wetherby, L. S. Wiggins, A. C. Young, L.-H. Zhang, K. Osoegawa, B. Zhu, B. Zhao, C. L. Shu, P. J. De Jong, C. E. Lawrence, A. F. Smit, A. Chakravarti, D. Haussler, P. Green, W. Miller and E. D. Green

Nature 424, 788-793(14 August 2003)

doi:10.1038/nature01858

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Supplementary Information 1: BAC Isolation, Mapping, and Sequencing

Supplementary Information 2: Assembly, Annotation, and Alignment of Genomic Sequences

Supplementary Information 3: Customized UCSC Genome Browser

Supplementary Information 4: General Features of Sequence Conservation

Supplementary Information 5: Phylogenetic Analyses

Supplementary Information 6: Detection and Characterization of MCSs

Supplementary Information 7: Studies of Genome Dynamics

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