Original Article

Leukemia (2006) 20, 2137–2146. doi:10.1038/sj.leu.2404438; published online 2 November 2006

Proteomic discovery of Max as a novel interacting partner of C/EBPalpha: a Myc/Max/Mad link

A A Zada1, J A Pulikkan1, D Bararia1, M Geletu1, A K Trivedi1, M Y Balkhi1, W D Hiddemann2, D G Tenen3, H M Behre4 and G Behre1

  1. 1Bone Marrow Transplantation Unit, State Center for Cell and Gene Therapy, Clinic Internal Medicine IV, Martin-Luther-University, Halle, Germany
  2. 2Department of Internal Medicine III, University Hospital Grosshadern, Munich, Germany
  3. 3Division of Hematology/Oncology, Harvard Institutes of Medicine, Boston, MA, USA
  4. 4Andrology Section, Clinic Krollwitz, Martin-Luther-University, Halle, Germany

Correspondence: Professor Dr G Behre, Bone Marrow Transplantation Unit, State Center for Cell and Gene Therapy, Clinic Internal Medicine IV, Martin-Luther-University, Ernst-Grube-Str. 40, 06097 Halle, Germany. E-mail: gerhard.behre@medizin.uni-halle.de

Received 26 April 2006; Revised 10 September 2006; Accepted 14 September 2006; Published online 2 November 2006.

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Abstract

The transcription factor CCAAT/enhancer binding protein a (C/EBPalpha) is important in the regulation of granulopoiesis and is disrupted in human acute myeloid leukemia. In the present study, we sought to identify novel C/EBPalpha interacting proteins in vivo through immunoprecipitation using mass spectrometry-based proteomic techniques. We identified Max, a heterodimeric partner of Myc, as one of the interacting proteins of C/EBPalpha in our screen. We confirmed the in vivo interaction of C/EBPalpha with Max and showed that this interaction involves the basic region of C/EBPalpha. Endogenous C/EBPalpha and Max, but not Myc and Max, colocalize in intranuclear structures during granulocytic differentiation of myeloid U937 cells. Max enhanced the transactivation capacity of C/EBPalpha on a minimal promoter. A chromatin immunoprecipitation assay revealed occupancy of the human C/EBPalpha promoter in vivo by Max and Myc under cellular settings and by C/EBPalpha and Max under retinoic acid induced granulocytic differentiation. Interestingly, enforced expression of Max and C/EBPalpha results in granulocytic differentiation of the human hematopoietic CD34+ cells, as evidenced by CD11b, CD15 and granulocyte colony-stimulating factor receptor expression. Silencing of Max by short hairpin RNA in CD34+ and U937 cells strongly reduced the differentiation-inducing potential of C/EBPalpha, indicating the importance of C/EBPalpha–Max in myeloid progenitor differentiation. Taken together, our data reveal Max as a novel co-activator of C/EBPalpha functions, thereby suggesting a possible link between C/EBPalpha and Myc–Max–Mad network.

Keywords:

C/EBPalpha, proteomics, Myc–Max–Mad network, mass spectrometry, differentiation

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Introduction

Hematopoietic differentiation proceeds in a largely irreversible fashion and the role of transcription factors in regulating hematopoiesis has been well documented. This is particularly true for CCAAT/enhancer binding protein a (C/EBPalpha), one of the lineage-specific transcription factors that is essential for commitment to and development of the granulocytic lineage.1, 2 Recent data have indicated that C/EBPalpha may also regulate hematopoietic stem cell activity3 and act as a tumor suppressor gene in acute myeloid leukemias (AMLs), indicating an important role for C/EBPalpha in the control of cellular proliferation in vivo.4 Inactivation of C/EBPalpha is an important event in AML, and ectopic overexpression of C/EBPalpha leads to differentiation and growth arrest in AML.5 It is therefore suggested that C/EBPalpha has a crucial role in regulating the balance between cell proliferation and differentiation, which is crucial for lineage commitment of any cell type. These findings and data from our laboratory indicate that for AML to develop, the activity of C/EBPalpha must be curbed by either mutations or antagonistic protein–protein interactions.

C/EBPalpha can form protein–protein interactions with other bZIP and non-bZIP factors. Among them, c-Jun and PU.1,6, 7 E2F, p21, and cyclin-dependent kinases CDK2 and CDK4 have been well characterized.8, 9, 10 Thus, it has become increasingly clear that like most proteins, C/EBPalpha might not work alone, but in association with other factors regulates gene transcription. However, studies involving protein–protein interactions of C/EBPalpha at the global proteomic level are lacking. We therefore took advantage of high-throughput proteomics by mass spectrometry (LC-MS/MS) to identify proteins that specifically associate with C/EBPalpha in vivo. In our screen, Max was identified as a novel interacting partner of C/EBPalpha in addition to other new and known partners of C/EBPalpha.

Max is a member of the basic region-helix–loop–helix-leucine zipper protein that belongs to a network of transcription factors, which includes the Myc and Mad families of protein (commonly referred to as a Myc–Max–Mad network).11 The Myc–Max–Mad proteins can affect different aspects of cell behavior, including cell cycle, proliferation and differentiation, by modulating distinct target genes.12, 13, 14, 15 Max can form a homo- or a heterodimer and bind specifically to E-box DNA elements in target promoters (consensus CACGTG).16, 17 To function as transcriptional regulators, the members of the Myc and Mad families must heterodimerize with Max. Whereas Myc–Max activates transcription, Mad–Max and Mnt–Max repress transcription.18, 19, 20 Indirect evidences to the fact that C/EBPalpha could be a part of the Myc–Max–Mad network do exist in the literature.21, 22 However, no direct evidence has been reported so far.

In this study, we have characterized the role of Max as an interacting partner of C/EBPalpha. We show that Max is an important co-activator of C/EBPalpha and the stable silencing of Max inhibits the differentiation-inducing potential of C/EBPalpha. C/EBPalpha and Max not only colocalize but also the heterocomplex is preferentially formed on the human C/EBPalpha (hC/EBPalpha) promoter in vivo during granulocytic differentiation, thereby contributing to increased transactivation and differentiation capacity of C/EBPalpha.

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Materials and methods

Transfection of human hematopoietic CD34+ progenitors

Human CD34+ hematopoietic cells were selected, using a magnetic CD34 selection kit system (Milteny Biotec, Bergisch, Gladbach, Germany), from small aliquots of leukapheresis products collected from either healthy donor or a patient undergoing stem/progenitor cell collection after granulocyte-colony stimulating factor treatment for non-hematologic malignancy at Klinikum Krollwitz Hospital Halle, Germany, following their informed consent. After magnetic selection, more than 85% of the cells expressed the CD34 antigen. An aliquot containing 5 times 105 CD34+ cells was cultured in Iscove's modified Dulbecco's medium with 20% heat-inactivated fetal calf serum, 100 ng/ml Flt3-ligand, 100 ng/ml of stem cell factor, 100 ng/ml thrombopoietin, 100 ng/ml of interleukin-6 (IL-6) and 50 ng/ml of IL-3, 100 U/ml penicillin/streptomycin and 2 mM L-glutamine. The cells were transfected with various expression constructs using AMAXA nucleofection technology essentially as described by the manufacturer and analyzed for CD11b and CD15 expression by flow cytometry.

Cell lines, antibodies and treatments

Human myeloid cell lines U937 and K562-ER-C/EBPalpha were cultured under standard conditions. beta-Estradiol and retinoic acid (RA) (Sigma-Aldrich, Munich, Germany) were used at a concentration of 1–5 muM and 10-6 M, respectively. The antibodies used in this study were purchased from Santa Cruz (Heidelberg, Germany); for C/EBPalpha, SC-61 (14AA), SC-9315 (N-19) Max, SC-765 (C-124) and c-Myc, SC-42 (C-33) and Molecular Probes, Gmbh, Karlsruhe, Germany).

Immunoprecipitation and immunoblotting

The immunoprecipitation (IP) was performed from 500–1000 mug nuclear extracts of U937 cells in an IP buffer (50 mM Tris pH 7.5, 150 mM NaCl, 0.5% NP-40, 0.25% sodium deoxycholate), followed by washing in the buffer (50 mM Tris pH 7.5, 0.1% NP-40, 0.05% sodium deoxycholate) with respective antibodies (Santa Cruz) and the corresponding IgGs as controls. A Western blot analysis was used to confirm the identity of immunoprecipitated and/or co-precipitated proteins as described previously.23 Alternatively, the immunocomplexes were incubated with urea lysis buffer for further proteomic analysis.

Proteomic analysis: two-dimensional gel electrophoresis and protein identification by mass spectrometry

The proteomics methodology was used essentially as described recently by our group.34

Transient transfections using AMAXA and effectene

Effectene transfection reagent (Qiagen, Gmbh, Hilden, Germany) and lipofectamine (Invitrogen, Gmbh, Karlsruhe, Germany) were used for transient transfections according to the manufacturer's instructions. Transient transfections were carried out with minimal promoter/luciferase construct, which has been derived from an oligo 5'-GATCCAGATTGCGCAATCG-3' by self-annealing, followed by ligation into a BamHI site of the thymidine kinase (TK) promoter and co-transfected with expression plasmids for hC/EBPalpha, Renilla Luciferase-null and/or Max as described.23 The Nucleofector kit (AMAXA, Gmbh, Cologne, Germany) was used essentially as described by the manufacturer. A 5 mug portion of plasmid DNA constructs was used for each transfection and the transfection efficiency was analyzed using a plasmid with eGFP marker (2 mug). For CD34+ and U937 cells, nucleofector solution kits used were VPA-1003 and VCA-1003 with nucleofection programs U-08 and V-01, respectively. The voltages are automatically adjusted according to the program and are essentially 110 V AC with a frequency of 50–60 Hz and a power consumption of 16 VA/fuse.

Immunofluorescence and flow cytometry

U937 cells (3 times 105), under uninduced condition or induced with RA (Sigma-Aldrich), were cytocentrifuged on glass slides with coverslips, fixed using 1:1 methanol/acetone and permeabilized using 0.3% Triton X. After blocking in PBG (0.5% BSA, 0.045% Fish–gelatin in phosphate-buffered saline) containing 5% FBS, the fixed cells were incubated with anti-C/EBPalpha (anti-goat; Santa Cruz), anti-Max (anti-rabbit; Santa Cruz) and anti-Myc (anti-mouse; Santa Cruz) antibodies, followed by incubation with corresponding Alexa Fluor 488 chicken anti-goat, Alexa Fluor 594 chicken anti-rabbit and anti-mouse IgG secondary antibodies (Molecular Probes) and 4',6'-diamidino-2-phenylindole dihydrochloride (DAPI, 1 mug/ml) for 15 min. The cells were mounted in aqueous mounting medium and the images were acquired and analyzed using a fluorescence microscope (times 100, times 60). Flow cytometry was performed for CD11b, CD14 and CD15 expression on Bectin Dikinson flow cytometer, using the supplied analysis software.

Quantitative real-time PCR

RNA isolation from CD34+ and U937 cells, transfected with different expression constructs, by TRIZOL (Invitrogen, Germany) was followed by cDNA synthesis using standard conditions. Equal amount of cDNA was taken for a subsequent quantitative real-time PCR (Q-RT-PCR) using the Quantitech SyBR Green PCR kit (Qiagen, Germany) in a Rotor-Gene RG-3000 (Corbett Research, Sydney, Australia). The delta ct value (Deltact) was then calculated from the given ct value by the formula Deltact=ctsample-ctcontrol). The fold change was calculated as fold change=2-Deltact. The following primer sequences were used: myeloperoxidase (MPO), 5'-TCG GTA CCC AGT TCA GGA AG-3' (forward) and 5'-CCA GGT TCA ATG CAG GAA GT-3' (reverse); neutrophilelastase (NE), 5'-TGC TCA ACG ACA TCG TGA TT-3' (forward) and 5'-CTC ACG AGA GTG CAG ACG TT-3' (reverse); GCSFR, 5'-AAG AGC CCC CTT ACC CAC TAC ACC ATC TT-3' (forward) and 5'-TGC TGT GAG CTG GGT CTG GGA CAC TT-3' (reverse); CD14, 5'-CAA CTT CTC CGA ACC TCA GC-3' (forward) and 5'-CCA GTA GCT GAG CAG GAA CC-3' (reverse).

Chromatin immunoprecipitation assay

Logarithmically growing and differentiating U937 cells (approx1 times 108 cells) were fixed with formaldehyde (final concentration 1% (v/v)) in serum free RPMI-1640 medium, at 4°C for 1 h. Glycine was added to a final concentration of 0.125 M to stop cross-linking. Fixed cells were pelleted by centrifugation and sequentially washed and sonicated (five times for 20 s each) to make soluble chromatin. Samples of total chromatin were taken at this point to use as a positive control in the PCRs (input chromatin). Antibodies against C/EBPalpha, Max and c-Myc were used overnight at 4°C. After serial elution, washing and cross-link reverse, the samples were extracted twice with phenol/chloroform and precipitated with ethanol overnight in the presence of 20 mug glycogen as a carrier. DNA fragments were recovered by centrifugation, resuspended in ddH2O, and used for PCR amplification. For detection of immunoprecipitated C/EBPalpha promoter region, two primers, forward (5'-ACCGCTACCGACCACGTGGGCG-3') and reverse (5'-AGCACCTCCGGGTCGCGAATGG-3'), specific for a 280 bp region in the cellular C/EBPalpha promoter that encompasses the C/EBP site were used for Q-RT-PCR amplification.

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Results

Identification of Max, a heterodimeric partner of Myc, as a novel interacting protein of C/EBPalpha

To identify interacting proteins of C/EBPalpha in vivo under physiological conditions on a global level, we applied proteomics technique coupled with mass spectrometry using the IP conditions of endogenous C/EBPalpha from myeloid U937 cells as a model system.

Under our experimental conditions, we could specifically immunoprecipitate endogenous C/EBPalpha from the nuclear extracts of U937 cells (Figure 1a) and co-immunoprecipitate other endogenous proteins (as positive controls) such as c-Jun and CDK4 (Figure 1b and data not shown) that were not present in the isotype IgG control. Immunocomplexes were further processed for proteomic analysis. The protein spots excised from the 2D gels (Figure 1c, spots are numbered) were identified by MALDI-TOF MS. Additionally, the individual bands were excised from Coomassie/silver-stained sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels (Figure 1d) and processed for LC-MS/MS. From both screens, we were able to reveal the identity of 10 proteins by MS, which specifically interact with C/EBPalpha (Table 1). Among these proteins, we identified Max as one interacting partner of C/EBPalpha. C/EBPalpha was also identified by MS analysis of the corresponding band (Figure 1d), thereby serving as a control for our experimental setup. Proteins in other bands could not be determined because of the poor quality of the spectrum. The discovery of Max as a novel C/EBPalpha partner is intriguing because of the role Max plays in switching of the complexes during myeloid differentiation.24 We therefore selected Max for further functional and biological characterization.

Figure 1.
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MS-based proteomics identifies proteins specifically interacting with C/EBPalpha in vivo after its immunoprecipitation from myeloid U937 cells. (a) C/EBPalpha IP from nuclear extracts of U937 cells and a corresponding immunoblotting (IB) with anti-C/EBPalpha antibody to confirm the presence of C/EBPalpha protein in the IP complex. In vitro-translated C/EBPalpha (ivt, lane 1) was used as a positive control in the Western blot. (b) C/EBPalpha IP and corresponding IB with anti-c-Jun antibody to show endogenous proteins co-precipitated with C/EBPalpha. ivt c-Jun was used as a positive control for c-Jun. (c) Silver-stained 2D gels showing proteins specifically interacting with C/EBPalpha. C/EBPalpha was immunoprecipitated from nuclear extracts using anti-C/EBPalpha antibody (anti-rabbit; Santa Cruz) and the immunocomplex separated in the first dimension by pH 4–7 IPGphor strips followed by their separation in the second dimension using 12% SDS-PAGE. As a specificity control, we used immunoprecipitation with IgG under similar conditions. (d) Silver-stained SDS-PAGE gels after IP with anti-C/EBPalpha and anti-IgG. The bands were excised and peptide mixture after trypsin digestion was run on a reverse-phase high-pressure liquid chromatography and the peptides identified by MALDI-TOF-TOF (Applied Biosystems, Darmstadt, Germany).

Full figure and legend (142K)


C/EBPalpha and Max interact in a cellular setting: confirmation of proteomics data

To confirm the observed interaction of Max with CEBPalpha by an alternative technique, we performed reciprocal immunoprecipitation. Our results demonstrate that C/EBPalpha interacts with Max and vice versa (Figure 2a) in vivo, and thereby confirm proteomic results. It is important to note that for the same amounts of nuclear extracts used (5 and 10 mug) as input controls, the levels of the two transcription factors are dramatically different, which is likely due to Max being more stable than C/EBPalpha.

Figure 2.
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In vivo interaction of C/EBPalpha with Max confirmed by reciprocal IP involves the DNA-binding domain of C/EBPalpha. (a) Reciprocal IPs: C/EBPalpha and Max were immunoprecipitated (IP C/EBPalpha, IP Max) from nuclear extracts of U937 cells by incubation with anti-C/EBPalpha and anti-Max, respectively, and respective IgG as controls. The blot was first probed with anti-C/EBPalpha antibody, stripped and reprobed with anti-Max antibody. (b) Basic region of C/EBPalpha is involved in its interaction with Max. Schematic representation of wild-type hC/EBPalpha and different mutants used in this study. TAD, transactivation domains 1 and 2; BR, basic region; LZ, leucine zipper domain; HLH, helix–loop–helix. (c) hC/EBPalpha wild type and its mutants were transfected in 293T cells and co-transfected with wild-type Max expression plasmid. At 24 h post-transfection, the nuclear extracts were prepared and IP of Max performed for the samples followed by immunoblot for C/EBPalpha or Max using anti-C/EBPalpha and HA antibodies, respectively.

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BR3 region of C/EBPalpha is involved in its interaction with Max

To investigate the protein domains that might be involved in C/EBPalpha–Max interaction, we performed co-immunoprecipitation studies using different mutants of C/EBPalpha as shown. C/EBPalpha and its various mutants (kind gift from Dr Alan Friedman; Figure 2b) were transiently transfected into 293 cells, and co-transfected with an expression plasmid for Max (a kind gift from Dr Dirk Eick) containing a carboxy-terminal HA tag.25 Max was then immunoprecipitated from nuclear extracts using anti-Max antibody. The associated complexes were assayed by immunoblotting for C/EBPalpha using anti-C/EBPalpha antibody. Our results demonstrate that C/EBPalpha could be co-immunoprecipitated when IP was performed using anti-Max antibody in samples in which wild-type C/EBPalpha: wild-type Max, GZ/LZ C/EBPalpha: wild-type Max and L1-2V C/EBPalpha: wild-type Max were coexpressed (Figure 2c, lanes 4, 3, 1, respectively). However, C/EBPalpha could not be co-immunoprecipitated in immunoprecipitated samples in which basic region mutant BR3-C/EBPalpha: wild-type Max was co-expressed (Figure 2c, lane 2). We also show that Max could be specifically immunoprecipitated (as controls) with immunoblot for Max using anti-HA antibody (Figure 2c, lower panel). The relative expression of C/EBPalpha mutants was the same (data not shown). These data show that the basic region of C/EBPalpha is involved in its interaction with Max in a cellular setting. Furthermore, we observed that wild-type Max and its basic region mutants have the same ability to interact with C/EBPalpha (Supplementary Figure S1a and b).

C/EBPalpha and Max colocalize

Given the fact that C/EBPalpha and Max are nuclear transcription factors and the observation that they interact in vivo, we next investigated the localization of these proteins by indirect immunofluorescence in myeloid U937 cells. We observed both endogenous C/EBPalpha and Max to be localized in intranuclear structures (Figure 3a) and the overlay of the two images shows that both proteins colocalize in these intranuclear structures (Figure 3a,panel 4; yellow signal).

Figure 3.
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Endogenous C/EBPalpha-Max but not Myc–Max remains colocalized during granulocytic differentiation of U937 cells. (a) Indirect immunofluorescence staining for C/EBPalpha (anti-goat; Santa Cruz), Max (anti-rabbit; Santa Cruz) and Myc (anti-mouse, Santa Cruz) using respective conjugated secondary antibodies (Molecular Probes). U937 cells were cytocentrifuged on glass slide cover slips, fixed with methanol/acetone, permeabilized with 0.3% Triton X stained with respective antibodies (Alexa Fluor, Molecular Probes) and DAPI. The morphology of the cells was visualized under fluorescence microscope (X60–100). Colocalization is demonstrated by the yellow signals. Indirect immunofluorescence staining for (b) C/EBPalpha-Max and (c) Myc–Max using conjugated antibodies (Molecular Pobes) in U937 cells after RA treatment. (d) Immunoblot analysis showing expression of c-Myc, Max and C/EBPalpha under RA-induced and uninduced conditions from various fractions. Blots were stripped and reprobed with specific antibody. Upper panel: whole-cell lysates; NF: nuclear fraction; CF: cytoplasmic fraction.

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C/EBPalpha–Max but not Myc–Max remains colocalized during granulocytic differentiation of myeloid U937 cells

We next investigated the effect on C/EBPalpha–Max colocalization when the cells were triggered for granulocytic differentiation by RA for 24 h. We observed intranuclear staining with C/EBPalpha and Max antibodies, and the overlay of the two images shows that both proteins remain colocalized even after RA treatment of the cells (Figure 3b, panel 4; yellow signal). As Max is associated with Myc, we also analyzed their localization in U937 cells. We observed that endogenous Myc–Max colocalize in the nucleus under uninduced condition (Figure 3a, panels 5 and 6). On the other hand, no intranuclear c-Myc signal could be detected after RA treatment (Figure 3c, panel 4; only green signal from Max). We next investigated the expression of c-Myc, Max and C/EBPalpha before and after RA treatment from various fractions (whole-cell lysates, nuclear fraction (NF) and cytoplasmic fraction (CF)) by Western blotting, using specific antibodies (Figure 3d). Our results revealed that the c-Myc protein level was drastically decreased in all the three fractions (Figure 3d, upper and lower panels) by RA. However, C/EBPalpha was undetectable in the CF and slightly increased in the NF by RA when analyzed by immunoblotting. Dot blot analysis revealed the presence of CEBPalpha in the CF as well. This indicates that the concentration of C/EBPalpha in the CF is quite low, so as not to be detected by immunoblotting (data not shown). Max, on the other hand, was relatively unchanged under induced and uninduced conditions. These data demonstrate that retention/colocalization of C/EBPalpha–Max, and not Myc–Max heterocomplexes, in the nucleus might be important events during granulocytic differentiation of U937 cells.

Max enhances the ability of C/EBPalpha to transactivate a minimal thymidine kinase promoter

To investigate the functional importance of C/EBPalpha–Max interaction and their colocalization, we performed transient transfection assays in the fibroblast 293T and the myeloid U937 cells using a minimal TK promoter containing two CCAAT binding sites cloned upstream of the luciferase reporter gene. Transfection of a Max expression construct significantly enhanced the ability of C/EBPalpha to transactivate a minimal TK promoter containing two CCAAT binding site in a dose-dependent manner (Figure 4a). In control experiments, no effect of Max on C/EBPalpha activity was observed when promoter with no CCAAT binding sites was used, whereas C/EBPalpha alone was able to transactivate the minimal promoter construct ninefold. Similar results were obtained with myeloid U937 cells (Figure 4b). Interestingly, co-transfection studies with the human approx2200 bp C/EBPa promoter (which has intact E-box site and no CCAAT site) revealed that C/EBPalpha alone was unable to transactivate the promoter, whereas, co-transfection of Max led to a significant increase in the promoter activity (Figure 4c). It is important to point out that Max itself does show some activation.

Figure 4.
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Max enhances the transactivation capacity of C/EBPalpha in transient transfection assays. (a, b) Transient transfection in 293T and U937 cells with a reporter construct of a minimal TK promoter with CEBP binding sites only p(CEBP)2TK and expression plasmids for hC/EBPalpha and Max. pTK (without CEBP sites) was used as control. Luciferase activities were measured 24 h after transfection and the values normalized by using Renilla luciferase PRL0. (c) Transient transfection in 293T cells with a 2200 bp hC/EBPalpha promoter showing increased promoter activation when Max is co-expressed. Histogram on the right shows promoter activation by hC/EBPalpha on a minimal promoter, used as a positive control in this experiment.

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C/EBPalpha and Max associate in vivo: a Myc–Max–Mad link

To further elucidate the mechanism by which Max augments the transcriptional activity of C/EBPalpha, we hypothesized that Max might associate with the hC/EBPalpha promoter in vivo because similar to C/EBPalpha, Max also possesses a DNA binding basic region. To test this possibility, we performed quantitative radioactive and non-radioactive chromatin immunoprecipitation (ChIP) in U937 cells (Figure 5). Chromatin was subjected to IP by using antibodies directed against C/EBPalpha, c-Myc and Max. The presence of C/EBPalpha promoter was detected by amplifying a promoter region using primers specific for a 280 bp region in the C/EBPalpha promoter that encompasses the CACGTG site (commonly referred to as E-box; Figure 5a). The E-box is conserved in the human and mouse C/EBPalpha promoter (Figure 5a). We observed that under normal physiological conditions (uninduced), endogenous c-Myc and Max appeared on C/EBPalpha promoter and there was undetectable endogenous C/EBPalpha occupancy on the hC/EBPalpha promoter (Figure 5b). IP using an isotype-matched IgG served as a negative control.

Figure 5.
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Max is associated at the hC/EBPalpha promoter in vivo and Max–C/EBPalpha associate strongly during granulocytic differentiation. A ChIP assay was performed on logarithmically growing and RA-treated U937 cells, and the precipitated chromatin was PCR-amplified using specific primers. (a) Comparison of the human and mouse C/EBP promoters encompassing a consensus CACGT sequence, commonly referred to as E-box and known to be occupied by Myc+Max heterodimers. (b) In vivo occupancy by Myc and Max at the hC/EBPalpha promoter in logarithmically growing and (c) by Max-C/EBPalpha in RA-treated U937 cells. Input: Radioactive and Q-RT-PCR performed on total chromatin. The histograms beneath show the Q-RT-PCR average Deltact values from two independent experiments normalized with the control sample. (d, e) ChIP assay using GAPDH promoter and human TERT promoter as controls with a non-radioactive RT-PCR. (f) Sheared DNA from U937 cells following 10 sonication pulses shows the optimal size range for IP (200–1000 bp). Lane: 1, unsheared; lanes: 2 and 3, sheared DNA.

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We next investigated the affect on heterocomplex formation at the hC/EBPalpha promoter upon differentiation by RA. We observed that both Max and C/EBPalpha appeared on C/EBPalpha promoter and in fact, more C/EBPalpha was associated with the promoter in the context of chromatin upon differentiation induction (Figure 5c, lane 4). The amount of Max bound to the promoter was fairly constant. DNA recovery was quantified as a percentage of the total input chromatin (lanes 5–7). Q-RT-PCR confirmed this observation and the histograms shown represent the average values from two independent experiments (Figure 5c, lower panel). A promoter without the CACGTG site, such as GAPDH promoter (Figure 5d), was used as a negative control for C/EBPalpha and Max occupancy and hTERT promoter (Figure 5e) as a positive control for Myc and Max interaction on the CACGTG site (E-box). The size of the DNA fragments before and after sonication is also shown (Figure 5f). Thus, C/EBPalpha and Max associate in vivo in the context of chromatin and are associated together more strongly on the hC/EBPalpha promoter when the cells are induced towards granulocytic differentiation.

Overexpression of Max and C/EBPalpha promotes differentiation along the granulocytic pathway in human hematopoietic CD34+ cells

We next asked whether interaction of Max with C/EBPalpha is biologically important for C/EBPalpha functions. Hence, we performed overexpression studies using three different experimental systems: human hematopoietic CD34+ cells, estradiol-inducible K562-C/EBPalpha-ER cells and U937 cells. Our results revealed that overexpression of Max or C/EBPalpha alone in CD34+ cells leads to a significant increase in the proportion of CD11b+ (Figure 6a, dot plot 44 vs 20%) and CD15+ (Figure 6a, dot plot 29 vs 13%) cells compared with the mock-transfected control, respectively. The histograms represent the average values from three different experiments, and the viable cell count data (Trypan blue staining) under different conditions are also shown for days 1 and 4 (Figure 6b). Q-RT-PCR in these cells revealed increased GCSF receptor expression (Figure 6c). Similar results were observed with U937 and K562-C/EBPalpha-ER cells (Supplementary Figure S2a and data not shown). The morphology of the cells was observed to correlate with the surface marker expression (Supplementary Figure S2b). Q-RT-PCR in U937 cells for various granulocytic/ monocytic markers was also performed to complement the fluorescence-activated cell sorting results (Supplementary Figure S2c).

Figure 6.
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Overexpression of Max induces differentiation along granulocytic pathway in human hematopoietic CD34+ cells. (a) The expression plasmids for human C/EBPalpha and Max were transfected into human hematopoietic CD34+ cells by using AMAXA technology. The surface expression of CD11b and CD15 was analyzed by flow cytometry at day 4. The histograms underneath represent data from three different experiments. (b) Trypan blue staining, showing the number of viable cells under different conditions. (c) Q-RT-PCR for GCSF receptor expression under the conditions shown from two experiments. (d) Stable silencing of Max by shRNA inhibits C/EBPalpha-induced differentiation in human hematopoietic CD34+ cells. The expression plasmid for human C/EBPalpha and/or expression Arrest shRNA_Max plasmid (Open Biosystems) were transfected into human hematopoietic CD34+ cells or U937 cells by using the AMAXA technology. After their selection in puromycine, the cells were analyzed for the surface expression of CD15 by flow cytometry and the data shown as dot plot with percentage of positive cells representative of one experiment. shRNA control was also used in all the experiments and is shown. The histograms represent the data from three different experiments. (e) A Western blot for Max using anti-Max antibody showing silencing of Max at the protein level by shRNA_MAX. The blot was stripped and reprobed with C/EBPalpha antibody. (f) Model, a summary of our data showing the importance of Max as a co-activator of C/EBPalpha in the differentiation of myeloid progenitors. Enforced expression of Max and CEBPalpha induces differentiation along the granulocytic pathway, and stable silencing of Max inhibits CEBPalpha-induced differentiation.

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Stable silencing of Max by short hairpin RNA reduces the differentiation-inducing capacity of C/EBPalpha in human hematopoietic CD34+ cells

If Max is a biologically important co-activator of C/EBPalpha, silencing of Max should inhibit differentiation induction by C/EBPalpha. To address this, we performed RNA interference experiments in human hematopoietic CD34+ cells and myeloid U937 cells (Supplementary Figure S2d) by using short hairpin RNA (shRNA) against Max (cat. no. RHS1764-9690535; Open Biosystems, Heidelberg, Germany) and control shRNA (cat. no. RHS1707; Open Biosystems). Cells were transfected with expression plasmids for C/EBPalpha alone and/or co-expressed with shRNA against Max, control shRNA, and the cells cultured in media containing puromycine. After selection, the cells were analyzed for granulocytic differentiation, using CD15 expression as a marker. Our results revealed that C/EBPalpha alone induces granulocytic differentiation (CD15+) five- to six-fold as compared with the mock-transfected CD34+ (Figure 6d). Coexpression of Max shRNA led to a significant decrease in CD15+ population (about twofold), whereas control shRNA did not lead to any significant reduction in CD15+ population (Figure 6d, compare histograms). The reduction of Max protein level with shRNA was confirmed by Western blotting and Max shRNA did not affect the expression of C/EBPalpha (Figure 6e). In conclusion, we propose a model shown as Figure 6f. Thus, Max is important for C/EBPalpha-mediated effects on granulocytic differentiation and might have an important role in stem cell development.

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Discussion

It has become increasingly clear that interaction of C/EBPalpha with other nuclear proteins plays an important role not only in lineage commitment and differentiation in the hematopoietic system but also in the pathogenesis of AML. Although the lineage commitment decision by C/EBPalpha was proposed by our laboratory to involve the functional inactivation of the myeloid master regulator PU.1 and/or its co-activator c-Jun through protein–protein interactions,6, 7 relatively little is known about how C/EBPalpha interacts with other nuclear proteins to activate gene transcription. The results presented in this article provide evidence that Max, a heterodimerization partner of Myc, is a novel, functionally and biologically important co-activator of CEBPalpha. C/EBPalpha and Max not only colocalize but also the heterocomplex is preferentially formed on the hC/EBPalpha promoter during granulocytic differentiation, thereby contributing to increased transactivation and differentiation capacity of C/EBPalpha.

We used MS-based proteomic analysis as a means of identifying the interacting partners of C/EBPalpha, utilizing IP of C/EBPalpha from myeloid U937 cells as a model system. U937 cells are a good model system for studying myeloid differentiation in general, as they are bipotential and can be differentiated into granulocytic lineage by RA and in particular, with respect to the functions of C/EBPalpha, as a threefold level of C/EBPalpha protein (above the level of endogenous C/EBPalpha) in U937 cells is sufficient for their granulocytic differentiation.26 In addition to nine other proteins (see Table), we identified Max, an essential heterodimerization partner of Myc,16 as a novel interacting partner of C/EBPalpha in our screen (Figure 1). The discovery of Max as a novel C/EBPalpha partner is intriguing because of the role Max plays in switching of the complexes during myeloid differentiation.24 Of particular importance is the fact that transgenic mice carrying an inserted transgene encoding Max have been shown to exhibit a 50- to 60-fold elevation of blood neutrophils.27 Additionally, Max is an essential heterodimerization partner of Myc family members to regulate transcription11 and c-Myc is an important target of C/EBPalpha.26 We confirmed the in vivo interaction of C/EBPalpha with Max by IP technique and showed that the basic DNA-binding region of C/EBPalpha is involved in this interaction, as the mutant of CEBPalpha (C/EBPalpha BR3), which lacks DNA-binding region, could not be co-precipitated with Max (Figure 2). C/EBPalpha BR3 carries mutations in four amino acids, residues Arg297, Lys298, Arg300 and Lys302.28 Of these, only Arg300 is expected to contact DNA. Neither the BR3 nor the Leu12Val variants bind DNA, suggesting that interaction with Max is likely via Arg297, Lys298 and/or Lys302. Arg297 is known to participate in the interaction between C/EBPalpha and E2F.8 Further study is required to pin point the exact amino acid involved in the C/EBPalpha and Max interaction.

The endogenous C/EBPalpha and Max proteins are not distributed evenly throughout the nucleoplasm (Figure 3), but are localized in intranuclear structures within the nucleus. These structures represent, presumably, centromeres, which are chromosomal structures associated with intranuclear chromosome positioning and cell cycle regulation. Interestingly, C/EBPalpha is associated with cell cycle regulation.29, 30 In other cell systems, such as pituitary progenitor GHFT1-5 cells, C/EBPalpha has been shown to concentrate at chromatin surrounding the centromeres.31 The observation that C/EBPalpha–Max but not Myc–Max remain colocalized during granulocytic differentiation (Figure 3) indicates that these intranuclear structures (centromeres) are selectively targeted by C/EBPalpha–Max during granulocytic differentiation. We observed the occupancy of the hC/EBPalpha promoter by Max in vivo under physiological conditions, and recruitment of more C/EBPalpha whereas Max is retained on the promoter during granulocytic differentiation. It is possible that the C/EBPalpha-Max heterocomplex regulates the balance of acetylated histones to modify chromatin structure at the hC/EBPalpha promoter and lead to transcriptional activation, as was shown by our results. In fact, TIP60, a histone acetyl transferase, was identified as an interacting partner of C/EBP to regulate histone acetylation at the hC/EBPalpha promoter alpha in an alternative approach (Bararia et al., manuscript submitted for publication). To our knowledge, this is a first report showing occupancy of the hC/EBPalpha promoter by Max in vivo.

The occupancy by Max of the hC/EBPalpha promoter raises a possibility that Myc could also form a part of the complex under physiological conditions, as Max requires dimerization with Myc for efficient DNA binding. In fact, it was shown that purified Myc+Max heterodimers form stable complexes on the mouse C/EBPalpha promoter that includes the USF binding site.21 The USF DNA recognition site CACGTG (which is the same as the E-box, occupied by Myc–Max) is found in both the human and the mouse C/EBPalpha promoter, and the USF binding site (for HLH-bZIP) is crucial for activation of the hC/EBPalpha promoter by C/EBPalpha.32 Our colocalization and ChIP data (Figures 4 and 5) and the data that C/EBPalpha is co-precipitated with Myc IP (unpublished observation) support this Myc–Max link. Thus, it is tempting to speculate that C/EBPalpha exists in association with the Myc–Max–Mad network to regulate differentiation under cellular settings. Given that the C/EBPalpha–Max heterocomplex is formed on hC/EBPalpha promoter, specifically during granulocytic differentiation, this would mean that the balance between such complexes, under the influence of growth and differentiation signals, could be an important part of a molecular switch that is regulating genes important for growth and differentiation.

By using overexpression studies, we have demonstrated that enforced expression of C/EBPalpha and Max in human hematopoietic CD34+ cells induces granulocytic differentiation. The role of C/EBPalpha in the transition from CMPs to GMPs in myeloid progenitors has been recently characterized.3 The role of Max in inducing granulocytic differentiation indicates that Max can activate myeloid differentiation program either independent of C/EBPalpha or in association with it. In vivo interaction and retention of C/EBPalpha–Max heterocomplex in myeloid cells (Figures 2, 4 and 5) and inhibition of differentiation-inducing capacity of C/EBPalpha by stable silencing of Max using shRNA against MAX in CD34+ cells (Figure 6) suggest CEBPalpha–Max association likely plays an important role in this process of myeloid progenitor differentiation. A very recent data from Alan Friedman's group has shown the role of C/EBPalpha in monopoiesis.33 This means that the commitment decisions do not necessarily depend upon a single transcription factor but, in fact, on a number of cooperating factors.

In summary, we conclude that Max is a biologically and functionally important and relevant interacting partner of C/EBPalpha and has important co-activator functions for C/EBPalpha-induced granulocytic differentiation in myeloid progenitors.

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References

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Acknowledgements

We thank Dr Dirk Eick for providing Max expression plasmids, Dr Robert Eisenman for in vitro-translatable Max plasmid and Dr Alan Friedman for C/EBPalpha constructs. This work was financially supported by Grant F03/04 of the Deutsche-Jose-Carreras Leukemia Stiftung, Muenchen Germany to Peer Zada AA.

Supplementary Information accompanies the paper on the Leukemia website (http://www.nature.com/leu)

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