TABLE OF CONTENTS

Volume 2, Issue 7 (July 2008)

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Mini-Review

Microbial Population and Community Ecology

The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity FREE

Stephen J Bent and Larry J Forney

ISME J 2: 689-695; advance online publication, May 8, 2008; doi:10.1038/ismej.2008.44

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Original Articles

Microbial Population and Community Ecology

Real-time detection of actively metabolizing microbes by redox sensing as applied to methylotroph populations in Lake Washington FREE

Marina G Kalyuzhnaya, Mary E Lidstrom and Ludmila Chistoserdova

ISME J 2: 696-706; advance online publication, March 27, 2008; doi:10.1038/ismej.2008.32

Characterizing mixed microbial population dynamics using time-series analysis FREE

Pål Trosvik, Knut Rudi, Tormod Næs, Achim Kohler, Kung-Sik Chan, Kjetill S Jakobsen and Nils C Stenseth

ISME J 2: 707-715; advance online publication, April 3, 2008; doi:10.1038/ismej.2008.36

Microbe-Microbe and Microbe-Host Interactions

Molecular analysis of the gut microbiota of identical twins with Crohn's disease FREE

Johan Dicksved, Jonas Halfvarson, Magnus Rosenquist, Gunnar Järnerot, Curt Tysk, Juha Apajalahti, Lars Engstrand and Janet K Jansson

ISME J 2: 716-727; advance online publication, April 10, 2008; doi:10.1038/ismej.2008.37

Humoral immunity to commensal oral bacteria in human infants: evidence that Streptococcus mitis biovar 1 colonization induces strain-specific salivary immunoglobulin A antibodies FREE

Katherine A Wirth, George H Bowden, Jennifer L Kirchherr, Dorothy A Richmond, Michael J Sheridan and Michael F Cole

ISME J 2: 728-738; advance online publication, April 17, 2008; doi:10.1038/ismej.2008.26

The immediate environment during postnatal development has long-term impact on gut community structure in pigs FREE

Claire L Thompson, Bing Wang and Andrew J Holmes

ISME J 2: 739-748; advance online publication, March 20, 2008; doi:10.1038/ismej.2008.29

Geomicrobiology and Microbial Contributions to Geochemical Cycles

Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach FREE

David Andrew Fike, Crystal Lynn Gammon, Wiebke Ziebis and Victoria Jeanne Orphan

ISME J 2: 749-759; advance online publication, June 5, 2008; doi:10.1038/ismej.2008.39

Microbial Ecology and Functional Diversity of Natural Habitats

Numbers, biomass and cultivable diversity of microbial populations relate to depth and borehole-specific conditions in groundwater from depths of 4–450 m in Olkiluoto, Finland FREE

Karsten Pedersen, Johanna Arlinger, Sara Eriksson, Anna Hallbeck, Lotta Hallbeck and Jessica Johansson

ISME J 2: 760-775; advance online publication, April 24, 2008; doi:10.1038/ismej.2008.43

Phylogenetic and functional gene analysis of the bacterial and archaeal communities associated with the surface microlayer of an estuary FREE

Michael Cunliffe, Hendrik Schäfer, Emma Harrison, Simon Cleave, Robert Upstill-Goddard and J Colin Murrell

ISME J 2: 776-789; advance online publication, March 20, 2008; doi:10.1038/ismej.2008.28

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Short Communication

Microbial Ecology and Functional Diversity of Natural Habitats

A rare SAR11 fosmid clone confirming genetic variability in the 'Candidatus Pelagibacter ubique' genome FREE

Jack A Gilbert, Martin Mühling and Ian Joint

ISME J 2: 790-793; advance online publication, May 22, 2008; doi:10.1038/ismej.2008.49

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