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Nucleotide sequence of the haemagglutinin gene of a human influenza virus H1 subtype

Abstract

Influenza remains a serious cause of disease in man and of death in the aged. Vaccination is only transiently effective in providing immunity1, because the surface haemagglutinin molecule of the virus can evolve rapidly, allowing the virus to escape neutralization by immunizing antibody. Of the three influenza A subtypes2 known to cause infection in man, the H1 subtype is of particular interest as it has proved to be the dominant human subtype this century and is now co-circulating with variants of the H3 subtype. Here we present the sequence of the haemagglutinin gene of an early H1 subtype (strain A/PR/8/34) as determined by recombinant DNA methods and dideoxy sequencing. From the deduced amino acid sequence of the haemagglutinin we define an antigenic site at amino acid residue 160. Comparison with haemagglutinin molecules3–9 shows that the H1 and H2 subtypes are more homologous to one another than to the other subtypes, which suggests that they have diverged only recently from one to another.

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References

  1. Tyrrell, D. A. J. & Smith, J. W. G. Br. med. Bull. 35, 77–85 (1979).

    Article  CAS  Google Scholar 

  2. Schild, G. C. et al. in Structure and Variation in Influenza Virus (eds Laver, W. G. & Air, G. M.) 373–383 (Elsevier, New York, 1980).

    Google Scholar 

  3. Porter, A. G. et al. Nature 282, 471–477 (1979).

    Article  CAS  ADS  Google Scholar 

  4. Gething, M. J. et al. Nature 287, 301–306 (1980).

    Article  CAS  ADS  Google Scholar 

  5. Both, G. W. & Sleigh, M. J. Nucleic Acids Res. 8, 2561–2575 (1980).

    Article  CAS  Google Scholar 

  6. Min Jou, M. et al. Cell 19, 683–696 (1980).

    Article  Google Scholar 

  7. Sleigh, M. J. et al. in Structure and Variation in Influenza Virus (eds Laver, W. G. & Air, G. M.) 69–78 (Elsevier, New York, 1980).

    Google Scholar 

  8. Verhoeyen, M. et al. Nature 286, 771–776 (1980).

    Article  CAS  ADS  Google Scholar 

  9. Ward, C. W. & Dopheide, T. Virology 103, 37–53 (1980).

    Article  CAS  Google Scholar 

  10. Winter, G. & Fields, S. Nucleic Acids Res. 8, 1965–1974 (1980).

    Article  CAS  Google Scholar 

  11. Fields, S., Winter, G. & Brownlee, G. G. Nature 290, 213–217 (1981).

    Article  CAS  ADS  Google Scholar 

  12. Winter, G. et al. Nucleic Acids Res. 9, 237–245 (1981).

    Article  CAS  Google Scholar 

  13. Sanger, F., Nicklen, S. & Coulson, A. R. Proc. natn. Acad. Sci. U.S.A. 74, 5463–5467 (1977).

    Article  CAS  ADS  Google Scholar 

  14. Sanger, F. et al. J. molec. Biol. 143, 161–178 (1980).

    Article  CAS  Google Scholar 

  15. Hamlyn, P. H. et al. Cell 15, 1067–1075 (1978).

    Article  CAS  Google Scholar 

  16. Simoncsitz, A. et al. Nature 269, 833–836 (1977).

    Article  ADS  Google Scholar 

  17. Brownlee, G. G. in Structure and Variation in influenza Virus (eds Laver, W. G. & Air, G. M.) 385–390 (Elsevier, New York, 1980).

    Google Scholar 

  18. Waterfield, M. D. et al. Br. med. Bull. 35, 57–63 (1979).

    Article  CAS  Google Scholar 

  19. Waterfield, M., Scrace, G. & Skehel, J. Nature 289, 422–424 (1981).

    Article  CAS  ADS  Google Scholar 

  20. Ward, C. W. & Dopheide, T. A. Br. med. Bull. 35, 51–56 (1979).

    Article  CAS  Google Scholar 

  21. Nakamura, K., Bhown, A. S. & Compans, R. W. Virology 107, 208–221 (1980).

    Article  CAS  Google Scholar 

  22. Laver, W. G., Gerhard, W., Webster, R. G., Frankel, M. E. & Air, G. M. Proc. natn. Acad. Sci. U.S.A. 76, 1425–1429 (1979).

    Article  CAS  ADS  Google Scholar 

  23. Wiley, D. C., Wilson, I. A. & Skehel, J. J. Nature 289, 373–378 (1981).

    Article  CAS  ADS  Google Scholar 

  24. Brownlee, G. G. in Expression of Eucaryotic, Viral and Cellular Genes (Academic, London, in the press).

  25. Pereira, M. S. Br. med. Bull. 35, 9–14 (1979).

    Article  CAS  Google Scholar 

  26. Laver, W. G. & Webster, R. G. Br. med. Bull. 35, 29–33 (1979).

    Article  CAS  Google Scholar 

  27. Hiti, A. L., Davis, A. R. & Nayak, D. P. Virology (in the press).

  28. Gronenborn, B. & Messing, J. Nature 272, 375–377 (1978).

    Article  CAS  ADS  Google Scholar 

  29. Rothstein, R. J. et al. Meth. Enzym. 68, 101–110 (1979).

    Google Scholar 

  30. Messing, J., Crea, R. & Seeburg, P. H. Nucleic Acids Res. 9, 309–321 (1981).

    Article  CAS  Google Scholar 

  31. Staden, R. Nucleic Acids Res. 8, 3673–3694 (1980).

    Article  CAS  Google Scholar 

  32. Duckworth, M. L. et al. Nucleic Acids Res. 9, 1691–1706 (1981).

    Article  CAS  Google Scholar 

  33. Gengqi, L. et al. Scientia Sinica 23, 1063–1069 (1979).

    Google Scholar 

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Winter, G., Fields, S. & Brownlee, G. Nucleotide sequence of the haemagglutinin gene of a human influenza virus H1 subtype. Nature 292, 72–75 (1981). https://doi.org/10.1038/292072a0

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