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Direct comparison of theoretical and experimental melting profiles for RFII ΦX174 DNA

Abstract

The determination by Sanger et al. of the complete nucleotide sequence for ΦX174 DNA has made it possible for the first time to compare directly theoretical and experimental DNA melting profiles. The comparison shows that the theory predicts the observed shape of the differential melting curve surprisingly well. Calculation of the denaturation maps allows the peaks on the curve to be correlated with cooperative melting out of concrete regions on the sequence of nucleotides.

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References

  1. Lazurkin, Y. S., Frank-Kamenetskii, M. D. & Trifonov, E. N. Biopolvmers 9, 1253–1306 (1970).

    Article  CAS  Google Scholar 

  2. Vedenov, A. A., Dykhne, A. M. & Frank-Kamenetskii, M. D. Usp. Fiz. Nauk 105, 479–519 (1971); Sov. Phys.-Usp. 14, 715–736 (1972).

    Article  CAS  Google Scholar 

  3. Wartell, R. M. & Montroll, E. W. Adv. Chem. Phys. 22, 129–203 (1972).

    CAS  Google Scholar 

  4. Frank-Kamenetskii, M. D. & Lazurkin, Y. S. A. Rev. Biophys. Bioenging 3, 127–150 (1974).

    Article  CAS  Google Scholar 

  5. Lyubchenko, Y. L., Frank-Kamenetskii, M. D., Vologodskii, A. V., Lazurkin, Y. S. & Gause, G. G. Biopolymers 15, 1019–1036 (1976).

    Article  CAS  Google Scholar 

  6. Yabuki, S., Gotoh, O. & Wada, A. Biochim. biophys. Ada 395, 258–273 (1975).

    Article  CAS  Google Scholar 

  7. Gotoh, O., Husimi, Y., Yabuki, S. & Wada, A. Biopolymers 15, 655–670 (1976).

    Article  CAS  Google Scholar 

  8. Wada, A., Tachibana, H., Gotoh, O. & Takanami, M. Nature 263, 439–440 (1976).

    Article  ADS  CAS  Google Scholar 

  9. Ansevin, A. T., Vizard, D. L., Brown, B. W. & McConathy, J. Biopolymers 15, 153–174 (1976).

    Article  CAS  Google Scholar 

  10. Vizard, D. L. & Ansevin, A. T. Biochemistry 15, 741–750 (1976).

    Article  CAS  Google Scholar 

  11. Frank-Kamenetskii, M. D. & Vologodskii, A. V. Nature 269, 5630 (1977).

    Article  Google Scholar 

  12. Sanger, F. et al. Nature 265, 687–695 (1977).

    Article  ADS  CAS  Google Scholar 

  13. Lacombe, R. H. & Simha, V. R. J. chem. Phys. 58, 1043–1053 (1973).

    Article  ADS  CAS  Google Scholar 

  14. Poland, D. Biopolymers 13, 1859–1871 (1974).

    Article  CAS  Google Scholar 

  15. Frank-Kamenetskii, M. D. & Frank-Kamenetskii, A. D. Molekulyarnaya Biologiya 3, 375–383 (1969); Molec. Biol. 3, 295–301 (1969).

    CAS  Google Scholar 

  16. Lukashin, A. V., Vologodskii, A. V. & Frank-Kamenetskii, M. D. Biopolymers 15, 1841–1844 (1976).

    Article  CAS  Google Scholar 

  17. Fixman, M. & Freire, J. J. Biopolymers (in the press).

  18. Lazurkin, Y. S., Lyubchenko, Y. L., Pavlov, V. M., Frank-Kamenetskii, M. D. & Berestetskaya, I. V. Biopolymers 14, 1551–1552 (1975).

    Article  CAS  Google Scholar 

  19. Kato, A. C., Bartok, K., Fraser, M. J. & Denhardt, D. T. Biochim. biophys. Acta 308, 68–78 (1973).

    Article  CAS  Google Scholar 

  20. Komano, T. & Sinsheimer, R. L. Biochim. biophys. Ada 155, 295–298 (1968).

    Article  CAS  Google Scholar 

  21. Bazaral, M. & Helinski, D. R. Proc. natn. Acad. Sci. U.S.A. 62, 1159–1166 (1969).

    Article  ADS  Google Scholar 

  22. Radloff, R., Bauer, W. & Vinograd, J. Proc. natn. Acad. Sci. U.S.A. 57, 1514–1521 (1967).

    Article  ADS  CAS  Google Scholar 

  23. Pavlov, V. M. & Lyubchenko, Y. L. Biopolymers (in the press).

  24. Borer, P. N., Dengler, B., Tinoco, I. Jr & Uhlenbeck, O. C. J. molec. Biol. 86, 843–853 (1974).

    Article  CAS  Google Scholar 

  25. Voskoboinik, A. D. et al. Molekulyarnava Biologiya 9, 783–790 (1975).

    CAS  Google Scholar 

  26. Belintsev, B. N., Vologodskii, A. V. & Frank-Kamenetskii, M. D. Molekulyarnaya Biologiya 10, 764–769 (1976).

    CAS  Google Scholar 

  27. Wada, A., Tachibana, H., Ueno, S., Husimi, Y. & Machida, Y. Nature 269, 352–353 (1977).

    Article  ADS  CAS  Google Scholar 

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Lyubchenko, Y., Vologodskii, A. & Frank-Kamenetskii, M. Direct comparison of theoretical and experimental melting profiles for RFII ΦX174 DNA. Nature 271, 28–31 (1978). https://doi.org/10.1038/271028a0

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