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| Open AccessNew treatment alternatives for primary and metastatic colorectal cancer by an integrated transcriptome and network analyses
- Caner Karaca
- , Ezgi Demir Karaman
- & Yasemin Basbinar
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| Open AccessInsights from bioinformatics analysis reveal that lipopolysaccharide induces activation of chemokine-related signaling pathways in human nasal epithelial cells
- Shaolin Tan
- , Yuelong Gu
- & Weitian Zhang
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| Open AccessA signature based on circadian rhythm-associated genes for the evaluation of prognosis and the tumour microenvironment in HNSCC
- Changqian Wang
- , Xiang Liu
- & Jiqiang Li
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| Open AccessComparative metabolomics reveals serum metabolites changes in goats during different developmental stages
- Qing Li
- , Tianle Chao
- & Jianmin Wang
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| Open AccessUncovering the molecular mechanisms of russet skin formation in Niagara grapevine (Vitis vinifera × Vitis labrusca)
- Guilherme Francio Niederauer
- , Geovani Luciano de Oliveira
- & Anete Pereira de Souza
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| Open AccessMulti-scale geometric network analysis identifies melanoma immunotherapy response gene modules
- Kevin A. Murgas
- , Rena Elkin
- & Allen R. Tannenbaum
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| Open AccessMolecular guidelines for promising antimicrobial agents
- Mateusz Rzycki
- , Marta Gładysiewicz-Kudrawiec
- & Sebastian Kraszewski
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| Open AccessPhenotyping EMT and MET cellular states in lung cancer patient liquid biopsies at a personalized level using mass cytometry
- Loukia G. Karacosta
- , Danny Pancirer
- & Sylvia K. Plevritis
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| Open AccessInterpretable unsupervised learning enables accurate clustering with high-throughput imaging flow cytometry
- Zunming Zhang
- , Xinyu Chen
- & Yu-Hwa Lo
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| Open AccessAnalytical study of reaction diffusion Lengyel-Epstein system by generalized Riccati equation mapping method
- Nauman Ahmed
- , Muhammad Z. Baber
- & Sayed M. El Din
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| Open AccessSubtyping of COVID-19 samples based on cell-cell interaction in single cell transcriptomes
- Kyeonghun Jeong
- , Yooeun Kim
- & Kwangsoo Kim
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| Open AccessExploring new subgroups for irritable bowel syndrome using a machine learning algorithm
- Elahe Mousavi
- , Ammar Hassanzadeh Keshteli
- & Peyman Adibi
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| Open AccessThe transcriptome signature analysis of the epithelial-mesenchymal transition and immune cell infiltration in colon adenocarcinoma
- Yusri Dwi Heryanto
- & Seiya Imoto
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| Open AccessInsights into next generation sequencing guided antibody selection strategies
- M. Frank Erasmus
- , Fortunato Ferrara
- & Andrew R. M. Bradbury
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| Open AccessEfficacy of Poria cocos and Alismatis rhizoma against diet-induced hyperlipidemia in rats based on transcriptome sequencing analysis
- Xiaowen Zhou
- , Jingbiao Luo
- & Xiantao Li
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| Open AccessGlobal transcriptome analysis reveals fungal disease responsive core gene regulatory landscape in tea
- Anjan Hazra
- , Sanatan Ghosh
- & Dipankar Chakraborti
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| Open AccessA novel signature for predicting prognosis and immune landscape in cutaneous melanoma based on anoikis-related long non-coding RNAs
- Miao Zhang
- , Yuzhi Zuo
- & Xing Guo
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Article
| Open AccessUpper limb modeling and motion extraction based on multi-space-fusion
- Honggang Wang
- , Junlong Guo
- & Yufeng Yao
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| Open AccessDefining and identifying cell sub-crosstalk pairs for characterizing cell–cell communication patterns
- Chenxing Zhang
- , Yuxuan Hu
- & Lin Gao
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| Open AccessExploration of common genomic signatures of systemic juvenile rheumatoid arthritis and type 1 diabetes
- Jie Zheng
- , Yong Wang
- & Jun Hu
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| Open AccessCross-species comparative analysis of single presynapses
- Eloïse Berson
- , Chandresh R. Gajera
- & Thomas J. Montine
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| Open AccessProteomic analysis of the effect of hemin in breast cancer
- G. P. Coló
- , K. Schweitzer
- & M. M. Facchinetti
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| Open AccessIdentification of macrophage-related genes in sepsis-induced ARDS using bioinformatics and machine learning
- Qiuyue Li
- , Hongyu Zheng
- & Bing Chen
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| Open AccessComprehensive prediction of immune microenvironment and hot and cold tumor differentiation in cutaneous melanoma based on necroptosis-related lncRNA
- Miao Zhang
- , Lushan Yang
- & Xing Guo
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Article
| Open AccessInference of transcriptome signatures of Escherichia coli in long-term stationary phase
- Sotaro Takano
- , Hiromi Takahashi
- & Saburo Tsuru
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Article
| Open AccessFunctional non-parametric mixed effects models for cytotoxicity assessment and clustering
- Tiantian Ma
- , Dan Richard
- & Cristina Anton
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| Open AccessDisentangling clustering configuration intricacies for divergently selected chicken breeds
- Anatoly B. Vakhrameev
- , Valeriy G. Narushin
- & Michael N. Romanov
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| Open AccessIdentification of essential genes and immune cell infiltration in rheumatoid arthritis by bioinformatics analysis
- You Ao
- , Zhongbo Wang
- & Wei Zhang
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Article
| Open AccessResistin-like beta reduction is associated to low survival rate and is downregulated by adjuvant therapy in colorectal cancer patients
- Michelino Di Rosa
- , Antonio Di Cataldo
- & Giovanni Li Volti
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| Open AccessIdentification and immune features of cuproptosis-related molecular clusters in polycystic ovary syndrome
- Zhe Su
- , Wenjing Su
- & Yanlin Wang
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| Open AccessPredicting cascading extinctions and efficient restoration strategies in plant–pollinator networks via generalized positive feedback loops
- Fatemeh Sadat Fatemi Nasrollahi
- , Colin Campbell
- & Réka Albert
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| Open AccessUnbiased choice of global clustering parameters for single-molecule localization microscopy
- Pietro Verzelli
- , Andreas Nold
- & Tatjana Tchumatchenko
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Article
| Open AccessEstablishment and validation of a redox-related long non-coding RNAs prognostic signature in head and neck squamous cell carcinoma
- Kaitai Liu
- , Tianyi Huang
- & Ming Tang
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| Open AccessGlobal patterns of prognostic biomarkers across disease space
- Neha Murad
- & Eugene Melamud
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| Open AccessAnalysis of bronchoalveolar lavage fluid metatranscriptomes among patients with COVID-19 disease
- Michael Jochum
- , Michael D. Lee
- & Krista L. Ternus
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| Open AccessTranscriptomics indicate nuclear division and cell adhesion not recapitulated in MCF7 and MCF10A compared to luminal A breast tumours
- Jeremy Joon Ho Goh
- , Corinna Jie Hui Goh
- & Keng-Hwee Chiam
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| Open AccessNew definitions of human lymphoid and follicular cell entities in lymphatic tissue by machine learning
- Patrick Wagner
- , Nils Strodthoff
- & Martin-Leo Hansmann
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| Open AccessParallel functional annotation of cancer-associated missense mutations in histone methyltransferases
- Ashley J. Canning
- , Susan Viggiano
- & Michael S. Cosgrove
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| Open AccessRecapitulation of the embryonic transcriptional program in holometabolous insect pupae
- Alexandra M. Ozerova
- & Mikhail S. Gelfand
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| Open AccessIntegrated network-based multiple computational analyses for identification of co-expressed candidate genes associated with neurological manifestations of COVID-19
- Suvojit Hazra
- , Alok Ghosh Chaudhuri
- & Nilkanta Chakrabarti
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| Open AccessDe novo metatranscriptomic exploration of gene function in the millipede holobiont
- Puspendu Sardar
- , Vladimír Šustr
- & Lucie Faktorová
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| Open AccessIdentification and verification of CCNB1 as a potential prognostic biomarker by comprehensive analysis
- Yinzhen Zeng
- & Rong Fan
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| Open AccessA machine learning-based SNP-set analysis approach for identifying disease-associated susceptibility loci
- Princess P. Silva
- , Joverlyn D. Gaudillo
- & Jason R. Albia
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| Open AccessEvaluation and comparison of unsupervised methods for the extraction of spatial patterns from mass spectrometry imaging data (MSI)
- Mridula Prasad
- , Geert Postma
- & Jeroen J. Jansen
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| Open AccessLatent class analysis of behavior across dog breeds reveal underlying temperament profiles
- Isain Zapata
- , Alexander W. Eyre
- & James A. Serpell
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| Open AccessIdentification of key genes of the ccRCC subtype with poor prognosis
- Grigory Andreevich Puzanov
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| Open AccessClassification of the plant-associated lifestyle of Pseudomonas strains using genome properties and machine learning
- Wasin Poncheewin
- , Anne D. van Diepeningen
- & Peter J. Schaap
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| Open AccessInteractive analysis of biosurfactants in fruit-waste fermentation samples using BioSurfDB and MEGAN
- Gabriela Fiori da Silva
- , Anupam Gautam
- & Daniel H. Huson
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| Open AccessMALAT1 as master regulator of biomarkers predictive of pan-cancer multi-drug resistance in the context of recalcitrant NRAS signaling pathway identified using systems-oriented approach
- Santosh Kumar
- & Seema Mishra