Biotic articles within Scientific Reports

Featured

• Editorial
  26 April 2024 | Open Access

  Current and future perspectives for biomass waste management and utilization

  The collection is dedicated to the conversion of biomass wastes into value-added bioproducts and bioactive compounds, with a focus on their applications in the agro-energy sector. Of particular relevance were three studies evaluating the effects of livestock waste, rice straw and biochar on soil properties, crops and productivity. Of note were two articles on the bioconversion of aquaculture sludge by insects and the production of biofuel from seed oil as an alternative to overcoming the depletion of fossil fuels. Finally, one article analysed the potential for recovering organic and mineral compounds from gastropod shells. The articles provided insights into the management and use of biomass wastes, as well as suggestions for future research to promote sustainability in agriculture.

  • Ornella Francioso

• Article
  21 March 2024 | Open Access

  Growers’ perceptions and attitudes towards fungicide resistance extension services

  • Toto Olita
  • , Michelle Stankovic
  •  & Mark Gibberd

• Article
  19 March 2024 | Open Access

  Apple crown and collar canker and necrosis caused by Cytospora balanejica sp. nov. in Iran

  • Razmig Azizi
  • , Youbert Ghosta
  •  & Abdollah Ahmadpour

• Article
  20 February 2024 | Open Access

  Cacao pod transcriptome profiling of seven genotypes identifies features associated with post-penetration resistance to Phytophthora palmivora

  • Indrani K. Baruah
  • , Jonathan Shao
  •  & Stephen P. Cohen

• Article
  08 February 2024 | Open Access

  Identification of self- and pathogen-targeted miRNAs from resistant and susceptible Theobroma cacao variety to black pod disease

  • Popi Septiani
  • , Yonadita Pramesti
  •  & Karlia Meitha

• Article
  25 January 2024 | Open Access

  Non-invasive assessment and visualization of Phytophthora cactorum infection in strawberry crowns using quantitative magnetic resonance imaging

  • Teemu Valtteri Tuomainen
  • , Anna Toljamo
  •  & Mikko Johannes Nissi

• Article
  12 December 2023 | Open Access

  Characterization of durum wheat resistance against leaf rust under climate change conditions of increasing temperature and [CO₂]

  • Rafael Porras
  • , Cristina Miguel-Rojas
  •  & Josefina C. Sillero

• Article
  31 October 2023 | Open Access

  Comparative RNA-seq analysis of resistant and susceptible banana genotypes reveals molecular mechanisms in response to banana bunchy top virus (BBTV) infection

  • Darlon V. Lantican
  • , Jen Daine L. Nocum
  •  & Fe M. Dela Cueva

• Article
  11 October 2023 | Open Access

  Global transcriptome analysis reveals fungal disease responsive core gene regulatory landscape in tea

  • Anjan Hazra
  • , Sanatan Ghosh
  •  & Dipankar Chakraborti

• Article
  10 October 2023 | Open Access

  Shifts of the soil microbiome composition induced by plant–plant interactions under increasing cover crop densities and diversities

  • Derek R. Newberger
  • , Ioannis S. Minas
  •  & Jorge M. Vivanco

• Article
  05 October 2023 | Open Access

  The potential of UAV and very high-resolution satellite imagery for yellow and stem rust detection and phenotyping in Ethiopia

  • Gerald Blasch
  • , Tadesse Anberbir
  •  & Francelino A. Rodrigues Jr.

• Article
  30 September 2023 | Open Access

  Genetic diversity of Actinidia spp. shapes the oomycete pattern associated with Kiwifruit Vine Decline Syndrome (KVDS)

  • Giovanni Mian
  • , Guido Cipriani
  •  & Paolo Ermacora

• Article
  22 September 2023 | Open Access

  In vivo spectroscopy and machine learning for the early detection and classification of different stresses in apple trees

  • Ulrich E. Prechsl
  • , Abraham Mejia-Aguilar
  •  & Cameron B. Cullinan

• Article
  18 August 2023 | Open Access

  Genome-wide analysis and characterization of the LRR-RLK gene family provides insights into anthracnose resistance in common bean

  • Caroline Marcela da Silva Dambroz
  • , Alexandre Hild Aono
  •  & Welison Andrade Pereira

• Article
  26 May 2023 | Open Access

  Decoding the physiological response of plants to stress using deep learning for forecasting crop loss due to abiotic, biotic, and climatic variables

  • Mridul Kumar
  • , Zeeshan Saifi
  •  & Soami Daya Krishnananda

• Article
  29 March 2023 | Open Access

  Application of image processing and transfer learning for the detection of rust disease

  • Fereshteh Shahoveisi
  • , Hamed Taheri Gorji
  •  & Fartash Vasefi

• Article
  13 March 2023 | Open Access

  Radical cation scavenging activity of berberine bridge enzyme-like oligosaccharide oxidases acting on short cell wall fragments

  • Anna Scortica
  • , Valentina Scafati
  •  & Benedetta Mattei

• Article
  28 December 2022 | Open Access

  Morphoanatomical and biochemical factors associated with rice resistance to the South American rice water weevil, Oryzophagus oryzae (Coleoptera: Curculionidae)

  • Juliano de Bastos Pazini
  • , José Francisco da Silva Martins
  •  & Anderson Dionei Grützmacher

• Article
  06 December 2022 | Open Access

  ¹H NMR metabolomics analysis of oil palm stem tissue infected by Ganoderma boninense based on field severity Indices

  • Adi Pancoro
  • , Elfina Karima
  •  & Yunus Effendi

• Article
  27 November 2022 | Open Access

  Apoptotic-like PCD inducing HRC gene when silenced enhances multiple disease resistance in plants

  • A. C. Kushalappa
  • , N. G. Hegde
  •  & L. Ajjamada

• Article
  01 November 2022 | Open Access

  Reference genes expression stability in Avena sativa L. during compatible and incompatible interactions with Puccinia graminis

  • Sylwia Sowa
  • , Magdalena Sozoniuk
  •  & Edyta Paczos-Grzęda

• Article
  01 November 2022 | Open Access

  A method for quantitation of apoplast hydration in Arabidopsis leaves reveals water-soaking activity of effectors of Pseudomonas syringae during biotrophy

  • Gayani Ekanayake
  • , Reid Gohmann
  •  & David Mackey

• Article
  13 October 2022 | Open Access

  Whole farm planning raises profit despite burgeoning climate crisis

  • Albert Muleke
  • , Matthew Tom Harrison
  •  & Yunbo Zhang

• Article
  25 August 2022 | Open Access

  Identification of Pseudomonas strains for the biological control of soybean red crown root rot

  • Khin Thuzar Win
  • , Michie Kobayashi
  •  & Chang-Jie Jiang

• Article
  12 April 2022 | Open Access

  Exploring cellulose nanocrystals obtained from olive tree wastes as sustainable crop protection tool against bacterial diseases

  • Daniele Schiavi
  • , Sara Francesconi
  •  & Giorgio M. Balestra

• Article
  08 April 2022 | Open Access

  Agro-active endo-therapy treated Xylella fastidiosa subsp. pauca-infected olive trees assessed by the first ¹H-NMR-based metabolomic study

  • Chiara Roberta Girelli
  • , Mudassar Hussain
  •  & Francesco Paolo Fanizzi

• Article
  22 March 2022 | Open Access

  Genome wide study of cysteine rich receptor like proteins in Gossypium sp.

  • Athar Hussain
  • , Naila Asif
  •  & M. Shahid Mukhtar

• Article
  18 March 2022 | Open Access

  Response of tomatoes primed by mycorrhizal colonization to virulent and avirulent bacterial pathogens

  • Moeka Fujita
  • , Miyuki Kusajima
  •  & Hideo Nakashita

• Article
  28 February 2022 | Open Access

  Precipitation effects on grassland plant performance are lessened by hay harvest

  • Karen Castillioni
  • , Michael A. Patten
  •  & Lara Souza

• Article
  31 January 2022 | Open Access

  Multiple roles of bamboo as a regulator of cyanobacterial bloom in aquatic systems

  • Aimin Hao
  • , Mengyao Su
  •  & Yasushi Iseri

• Article
  17 January 2022 | Open Access

  Modeling risk of Sclerotinia sclerotiorum-induced disease development on canola and dry bean using machine learning algorithms

  • F. Shahoveisi
  • , M. Riahi Manesh
  •  & L. E. del Río Mendoza

• Article
  17 January 2022 | Open Access

  Analysis of NIA and GSNOR family genes and nitric oxide homeostasis in response to wheat-leaf rust interaction

  • Deepak T. Hurali
  • , Ramesh Bhurta
  •  & Shailendra K. Jha

• Article
  21 October 2021 | Open Access

  Earthworm activity optimized the rhizosphere bacterial community structure and further alleviated the yield loss in continuous cropping lily (Lilium lancifolium Thunb.)

  • Yaoxiong Lu
  • , Peng Gao
  •  & Liangying Dai

• Article
  24 September 2021 | Open Access

  New early phenotypic markers for cucumber green mottle mosaic virus disease in cucumbers exposed to fluctuating extreme temperatures

  • Ori Molad
  • , Elisheva Smith
  •  & Aviv Dombrovsky

• Article
  21 September 2021 | Open Access

  Stability analysis of reference genes for RT-qPCR assays involving compatible and incompatible Ralstonia solanacearum-tomato ‘Hawaii 7996’ interactions

  • Greecy M. R. Albuquerque
  • , Fernando C. A. Fonseca
  •  & Maria Esther N. Fonseca

• Article
  05 August 2021 | Open Access

  Oviposition preference not necessarily predicts offspring performance in the fall armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae) on vegetable crops

  • Paola Sotelo-Cardona
  • , Wen-Po Chuang
  •  & Srinivasan Ramasamy

• Article
  29 July 2021 | Open Access

  Cooperative roles of introns 1 and 2 of tobacco resistance gene N in enhanced N transcript expression and antiviral defense responses

  • Chihiro Ikeda
  • , Kazuo Taku
  •  & Nobumitsu Sasaki

• Article
  02 June 2021 | Open Access

  On-field phenotypic evaluation of sunflower populations for broad-spectrum resistance to Verticillium leaf mottle and wilt

  • Juan F. Montecchia
  • , Mónica I. Fass
  •  & Norma B. Paniego

• Article
  27 May 2021 | Open Access

  Defining the combined stress response in wild Arachis

  • Ana Paula Zotta Mota
  • , Ana Cristina Miranda Brasileiro
  •  & Patricia Messenberg Guimaraes

• Article
  05 May 2021 | Open Access

  Nitrogen supply and intercropping control of Fusarium wilt in faba bean depend on organic acids exuded from the roots

  • Jiaxing Lv
  • , Jingxiu Xiao
  •  & Yan Dong

• Article
  03 May 2021 | Open Access

  Mitigation of bacterial spot disease induced biotic stress in Capsicum annuum L. cultivars via antioxidant enzymes and isoforms

  • Musarrat Ramzan
  • , Sundas Sana
  •  & Subhan Danish

• Article
  21 April 2021 | Open Access

  Genome-wide identification, evolutionary relationship and expression analysis of AGO, DCL and RDR family genes in tea

  • Debasish B. Krishnatreya
  • , Pooja Moni Baruah
  •  & Niraj Agarwala

• Article
  19 April 2021 | Open Access

  Identification and functional analyses of host factors interacting with the 17-kDa protein of Barley yellow dwarf virus-GAV

  • Siyu Chen
  • , Xiaoyu Han
  •  & Xue Yang

• Article
  15 April 2021 | Open Access

  A biological agent modulates the physiology of barley infected with Drechslera teres

  • Aurélie Backes
  • , Nathalie Vaillant-Gaveau
  •  & Cédric Jacquard

• Article
  12 April 2021 | Open Access

  Novel resistance strategies to soybean cyst nematode (SCN) in wild soybean

  • Janice Kofsky
  • , Hengyou Zhang
  •  & Bao-Hua Song

• Article
  17 February 2021 | Open Access

  Overexpression of ZmWRKY65 transcription factor from maize confers stress resistances in transgenic Arabidopsis

  • Tong Huo
  • , Chang-Tao Wang
  •  & Xin-Yuan Song

• Article
  26 January 2021 | Open Access

  Analyzing the G3BP-like gene family of Arabidopsis thaliana in early turnip mosaic virus infection

  • Hendrik Reuper
  • , Khalid Amari
  •  & Björn Krenz

• Article
  13 January 2021 | Open Access

  A non-targeted metabolomics study on Xylella fastidiosa infected olive plants grown under controlled conditions

  • Asmae Jlilat
  • , Rosa Ragone
  •  & Anna Maria D’Onghia

• Article
  11 January 2021 | Open Access

  Oxylipins are implicated as communication signals in tomato–root-knot nematode (Meloidogyne javanica) interaction

  • Nathalia Fitoussi
  • , Eli Borrego
  •  & Sigal Braun Miyara

• Article
  25 November 2020 | Open Access

  Genome-wide identification of Argonautes in Solanaceae with emphasis on potato

  • Zhen Liao
  • , Kristian Persson Hodén
  •  & Christina Dixelius