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Article
| Open AccessCauses and consequences of child growth faltering in low-resource settings
Analysis of data from 33 longitudinal cohorts from low- and middle-income countries indicates that conditions during pre-conception, pregnancy and the first few months of life are crucial in determining the risk of growth faltering in young children.
- Andrew Mertens
- , Jade Benjamin-Chung
- & Pablo Penataro Yori
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Article
| Open AccessChild wasting and concurrent stunting in low- and middle-income countries
An analysis of longitudinal cohort data across diverse populations suggests that the incidence of wasting between birth and 24 months is higher than previously thought, and highlights the role of seasonal factors that affect child growth.
- Andrew Mertens
- , Jade Benjamin-Chung
- & Pablo Penataro Yori
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Article
| Open AccessPolygenic scoring accuracy varies across the genetic ancestry continuum
Using two large biobank datasets, a study shows that the accuracy of polygenic scores decreases as a function of relatedness at the individual level when modelling genetic ancestry as a continuum.
- Yi Ding
- , Kangcheng Hou
- & Bogdan Pasaniuc
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Article |
Lung adenocarcinoma promotion by air pollutants
Combination of epidemiology, preclinical models and ultradeep DNA profiling of clinical cohorts unpicks the inflammatory mechanism by which air pollution promotes lung cancer
- William Hill
- , Emilia L. Lim
- & Charles Swanton
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Article
| Open AccessMono- and biallelic variant effects on disease at biobank scale
An analysis of biobank data from the FinnGen project examines dosage effects of genetic variants on disease, andidentifies a benefit when considering more complex inheritance in the genetics of common as well as Mendelian diseases.
- H. O. Heyne
- , J. Karjalainen
- & M. J. Daly
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Article
| Open AccessGenetic diversity fuels gene discovery for tobacco and alcohol use
A multi-ancestry meta-regression study analyses diverse genome-wide association studies and genome loci associated with tobacco and alcohol use.
- Gretchen R. B. Saunders
- , Xingyan Wang
- & Scott Vrieze
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Article |
T cells specific for α-myosin drive immunotherapy-related myocarditis
Cytotoxic CD8+ T cells specific for α-myosin are identified as pivotal players in myocarditis associated with immune checkpoint inhibitor anticancer therapies.
- Margaret L. Axelrod
- , Wouter C. Meijers
- & Justin M. Balko
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Article
| Open AccessClonal dynamics of haematopoiesis across the human lifespan
Haematopoiesis has high clonal diversity up to about 65 years of age, after which diversity drops precipitously owing to positive selection acting on a handful of clones that expand exponentially throughout adulthood.
- Emily Mitchell
- , Michael Spencer Chapman
- & Peter J. Campbell
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Article
| Open AccessThe longitudinal dynamics and natural history of clonal haematopoiesis
A long-term study of 385 human donors reports that driver gene mutations and age determine the lifelong dynamics of clonal haematopoiesis
- Margarete A. Fabre
- , José Guilherme de Almeida
- & George S. Vassiliou
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Article
| Open AccessTwin study reveals non-heritable immune perturbations in multiple sclerosis
In monozygotic twins discordant for multiple sclerosis, the influence of genetic predisposition and environmental factors is determined using matched-pair analyses.
- Florian Ingelfinger
- , Lisa Ann Gerdes
- & Burkhard Becher
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Article |
The power of genetic diversity in genome-wide association studies of lipids
A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.
- Sarah E. Graham
- , Shoa L. Clarke
- & Cristen J. Willer
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Matters Arising |
A finding of sex similarities rather than differences in COVID-19 outcomes
- Heather Shattuck-Heidorn
- , Ann Caroline Danielsen
- & Sarah S. Richardson
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Article |
Aquatic foods to nourish nations
Data on the nutrient content of almost 3,000 aquatic animal-source foods is combined with a food-systems model to show that an increase in aquatic-food production could reduce the inadequate intake of most nutrients.
- Christopher D. Golden
- , J. Zachary Koehn
- & Shakuntala H. Thilsted
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Article |
Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7
Analysis of community-tested cases of SARS-CoV-2 indicates that the B.1.1.7 variant is not only more transmissible than pre-existing variants, but may also cause more severe illness, and is associated with a higher risk of death.
- Nicholas G. Davies
- , Christopher I. Jarvis
- & Ruth H. Keogh
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Perspective |
Improving reporting standards for polygenic scores in risk prediction studies
An updated set of reporting standards for the development, interpretation and evaluation of polygenic risk scores is presented, which should aid the translation of these scores into clinical applications.
- Hannah Wand
- , Samuel A. Lambert
- & Genevieve L. Wojcik
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Article |
Sources of particulate-matter air pollution and its oxidative potential in Europe
Observations and air-quality modelling reveal that the sources of particulate matter and oxidative potential in Europe are different, implying that reducing mass concentrations of particulate matter alone may not reduce oxidative potential.
- Kaspar R. Daellenbach
- , Gaëlle Uzu
- & André S. H. Prévôt
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Article |
FLT3 stop mutation increases FLT3 ligand level and risk of autoimmune thyroid disease
A predicted loss-of-function germline mutation in FLT3 causes a reduction in full-length FLT3, with a compensatory increase in the levels of FLT3 ligand, leading to increased risk of autoimmune thyroid disease.
- Saedis Saevarsdottir
- , Thorunn A. Olafsdottir
- & Kari Stefansson
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Article
| Open AccessRepositioning of the global epicentre of non-optimal cholesterol
From 1980 to 2018, the levels of total and non-high-density lipoprotein cholesterol increased in low- and middle-income countries, especially in east and southeast Asia, and decreased in high-income western countries, especially those in northwestern Europe, and in central and eastern Europe.
- Cristina Taddei
- , Bin Zhou
- & Majid Ezzati
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Article |
Aerodynamic analysis of SARS-CoV-2 in two Wuhan hospitals
Aerodynamic analysis of SARS-CoV-2 RNA in two hospitals in Wuhan indicates that SARS-CoV-2 may have the potential to be transmitted through aerosols, although the infectivity of the virus RNA was not established in this study.
- Yuan Liu
- , Zhi Ning
- & Ke Lan
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Article
| Open AccessMapping child growth failure across low- and middle-income countries
High-resolution subnational mapping of child growth failure indicators for 105 low- and middle-income countries between 2000 and 2017 shows that, despite considerable progress, substantial geographical inequalities still exist in some countries.
- Damaris K. Kinyoki
- , Aaron E. Osgood-Zimmerman
- & Simon I. Hay
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Article
| Open AccessMapping disparities in education across low- and middle-income countries
Analyses of the proportions of individuals who have completed key levels of schooling across all low- and middle-income countries from 2000 to 2017 reveal inequalities across countries as well as within populations.
- Nicholas Graetz
- , Lauren Woyczynski
- & Simon I. Hay
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Article
| Open AccessA national experiment reveals where a growth mindset improves achievement
A US national experiment showed that a short, online, self-administered growth mindset intervention can increase adolescents’ grades and advanced course-taking, and identified the types of school that were poised to benefit the most.
- David S. Yeager
- , Paul Hanselman
- & Carol S. Dweck
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Letter
| Open AccessRising rural body-mass index is the main driver of the global obesity epidemic in adults
Contrary to the view that urbanization is a major driver of the global rise in obesity, the global increase in body-mass index is shown to be mostly due to increases in the body-mass indexes of rural populations.
- Honor Bixby
- , James Bentham
- & Majid Ezzati
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Letter
| Open AccessMapping changes in housing in sub-Saharan Africa from 2000 to 2015
The prevalence of improved housing (with improved drinking water and sanitation, sufficient living area and durable construction) in urban and rural sub-Saharan Africa doubled between 2000 and 2015.
- Lucy S. Tusting
- , Donal Bisanzio
- & Samir Bhatt
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Article |
Structural variation in the gut microbiome associates with host health
The authors systematically characterize structural variation in the genomes of gut microbiota and show that they are associated with bacterial fitness and with host risk factors, and that examining genes coded in these regions facilitates investigation of mechanisms that may underlie these associations.
- David Zeevi
- , Tal Korem
- & Eran Segal
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Letter |
Prediction of acute myeloid leukaemia risk in healthy individuals
Individuals who are at high risk of developing acute myeloid leukaemia can be identified years before diagnosis using genetic information from blood samples.
- Sagi Abelson
- , Grace Collord
- & Liran I. Shlush
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Letter |
Robust relationship between air quality and infant mortality in Africa
A 10 μg m−3 increase in the concentration of ambient respirable particulate matter is associated with a 9% rise in infant mortality in Africa and this increase is not affected by household wealth.
- Sam Heft-Neal
- , Jennifer Burney
- & Marshall Burke
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Article
| Open AccessMapping child growth failure in Africa between 2000 and 2015
Geospatial estimates of child growth failure in Africa provide a baseline for measuring progress and a precision public health platform to target interventions to those populations with the greatest need.
- Aaron Osgood-Zimmerman
- , Anoushka I. Millear
- & Simon I. Hay
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Analysis
| Open AccessAdolescence and the next generation
Investing in adolescents as the parents of the next generation is important for the wellbeing of current and future generations.
- George C. Patton
- , Craig A. Olsson
- & Susan M. Sawyer
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Brief Communications Arising |
Role of stem-cell divisions in cancer risk
- Cristian Tomasetti
- , Rick Durrett
- & Bert Vogelstein
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Letter |
Cysteine protease cathepsin B mediates radiation-induced bystander effects
The cysteine protease CPR-4, a cathepsin B homologue, is identified as a radiation-induced bystander effect (RIBE) factor in nematodes in response to ultraviolet or ionizing radiation, and causes inhibition of cell death and increased embryonic lethality.
- Yu Peng
- , Man Zhang
- & Ding Xue
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Brief Communications Arising |
Contesting the evidence for limited human lifespan
- Nicholas J. L. Brown
- , Casper J. Albers
- & Stuart J. Ritchie
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Letter |
Host and viral traits predict zoonotic spillover from mammals
Analysis of a comprehensive database of mammalian host–virus relationships reveals that both the total number of viruses that infect a given species and the proportion likely to be zoonotic are predictable and that this enables identification of mammalian species and geographic locations where novel zoonoses are likely to be found.
- Kevin J. Olival
- , Parviez R. Hosseini
- & Peter Daszak
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Letter |
Impacts and mitigation of excess diesel-related NOx emissions in 11 major vehicle markets
Across markets accounting for 80 per cent of global diesel vehicle sales, more than a third of diesel nitrogen oxide emissions are in excess of certification limits, causing many deaths.
- Susan C. Anenberg
- , Joshua Miller
- & Chris Heyes
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Review Article |
The effects of Δ9-tetrahydrocannabinol on the dopamine system
A review into the complex effects of Δ9-tetrahydrocannabinol on the dopamine system, examining data from animal and human studies and discussing the necessary future direction of research.
- Michael A. P. Bloomfield
- , Abhishekh H. Ashok
- & Oliver D. Howes
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Letter |
Changing cultural attitudes towards female genital cutting
Entertaining movies addressing both individual values and marriageability can provide a way to change cultural attitudes towards female genital cutting within certain cultures.
- Sonja Vogt
- , Nadia Ahmed Mohmmed Zaid
- & Charles Efferson
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Brief Communication |
Amyloid-β transmission or unexamined bias?
- Hieab H. H. Adams
- , Sonja A. Swanson
- & M. Arfan Ikram
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Letter |
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
Growing evidence from metagenome-wide association studies link multiple common disorders to microbial dysbiosis but effects of drug treatment are often not accounted for; here, the authors re-analyse two previous metagenomic studies of type 2 diabetes mellitus patients together with a novel cohort to determine the effects of the widely prescribed antidiabetic drug metformin and highlight the need to distinguish the effects of a disease from the effects of treatment on the gut microbiota.
- Kristoffer Forslund
- , Falk Hildebrand
- & Oluf Pedersen
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Brief Communications Arising |
PLD3 and sporadic Alzheimer's disease risk
- Jean-Charles Lambert
- , Benjamin Grenier-Boley
- & Philippe Amouyel
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Brief Communications Arising |
PLD3 gene variants and Alzheimer's disease
- Basavaraj V. Hooli
- , Christina M. Lill
- & Rudolph E. Tanzi
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Brief Communications Arising |
PLD3 variants in population studies
- Sven J. van der Lee
- , Henne Holstege
- & Cornelia M. van Duijn
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Brief Communications Arising |
PLD3 in non-familial Alzheimer's disease
- Stefanie Heilmann
- , Dmitriy Drichel
- & Alfredo Ramirez
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Letter |
The maternal-age-associated risk of congenital heart disease is modifiable
Increased maternal age is known to increase the risk of congenital heart disease in offspring; here, this link is investigated by transplanting ovaries between young and old mice, revealing that the maternal-age-associated risk is independent of the age of the ovaries but depends on the age of the mother, and that this risk can be mitigated by maternal genetic background or exercise.
- Claire E. Schulkey
- , Suk D. Regmi
- & Patrick Y. Jay
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Article
| Open AccessThe African Genome Variation Project shapes medical genetics in Africa
The African Genome Variation Project contains the whole-genome sequences of 320 individuals and dense genotypes on 1,481 individuals from sub-Saharan Africa; it enables the design and interpretation of genomic studies, with implications for finding disease loci and clues to human origins.
- Deepti Gurdasani
- , Tommy Carstensen
- & Manjinder S. Sandhu