Featured
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Comment
| Open AccessShining light on dinoflagellate photosystem I
Dinoflagellates are ecologically important and essential to corals and other cnidarians as phytosymbionts, but their photosystems had been underexplored. Recently, photosystem I (PSI) of dinoflagellate Symbiodinium sp. was structurally characterized using cryo-Electron Microscopy (cryo-EM). These analyses revealed a distinct organization of the PSI supercomplex, including two previously unidentified subunits, PsaT and PsaU, and shed light on interactions between light harvesting antenna proteins and the PSI core. These results have implications with respect to the evolution of dinoflagellates and their association with cnidarians.
- Senjie Lin
- , Shuaishuai Wu
- & Arthur R. Grossman
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Article
| Open AccessBioadhesive interface for marine sensors on diverse soft fragile species
It is useful to be able to equip marine animals with sensors, but it can be challenging to attach these to soft marine organisms. Here, the authors use an adhesive hydrogel to achieve rapid attachment of sensors to marine life including jellyfish, squid and lobster.
- Camilo Duque Londono
- , Seth F. Cones
- & Xuanhe Zhao
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Article
| Open AccessDiversity and potential host-interactions of viruses inhabiting deep-sea seamount sediments
Little is known about viral communities in deep-sea seamounts. In this study, the authors performed metagenomic and virome analysis from sediments in the western Pacific Ocean and characterize the diversity, distribution and potential ecological roles of viruses in deep-sea seamount sediments.
- Meishun Yu
- , Menghui Zhang
- & Min Jin
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Matters Arising
| Open AccessRectifying misinformation on the climate intervention potential of ocean afforestation
- Victor Smetacek
- , Mar Fernández-Méndez
- & Jiajun Wu
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Article
| Open AccessHigh hydrostatic pressure stimulates microbial nitrate reduction in hadal trench sediments under oxic conditions
Hadal trenches are the deepest oceanic ecosystems, with water depth over 6000 m, and are among the least explored habitats on Earth. This research demonstrates that high hydrostatic pressure enhances denitrification activity under oxic conditions, potentially making hadal trenches fixed nitrogen loss hotpots.
- Na Yang
- , Yongxin Lv
- & Yu Zhang
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Article
| Open AccessMarine heatwaves disrupt ecosystem structure and function via altered food webs and energy flux
This work leverages a new diet database and six long term monitoring efforts of 361 taxa to build comparable pre- and post-heatwave ecosystem models. The study provides empirical demonstration of changes in ecosystem-wide patterns of energy flux and biomass in response to marine heatwaves.
- Dylan G. E. Gomes
- , James J. Ruzicka
- & Joshua D. Stewart
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Article
| Open AccessSystematic review of the uncertainty of coral reef futures under climate change
Global warming targets are considered inadequate to protect coral reefs, but this prognosis is based on models with similar approaches. This systematic review of studies that project coral responses to climate change found that divergent modelling methodologies had discrepancies in coral reef outcomes, and that those used for climate change syntheses may project more severe consequences than other methods.
- Shannon G. Klein
- , Cassandra Roch
- & Carlos M. Duarte
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Article
| Open AccessThe inclusion of Amazon mangroves in Brazil’s REDD+ program
A new study shows that deforestation of Amazon mangroves releases up to four times more carbon dioxide when compared to emissions arising from terrestrial biomes. This study set a foundation for the use of mangroves in Brazil’s international policy agreements.
- Angelo F. Bernardino
- , Ana Carolina A. Mazzuco
- & J. Boone Kauffman
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Article
| Open AccessPatterns in the temporal complexity of global chlorophyll concentration
For satellite data, noisy observations can often be ignored in favour of smooth trends and signals. Here, the authors developed a method to quantify the complexity of chlorophyll-α time series on a global scale, which led to the discovery of greater differences among regions than previously recognized.
- Vitul Agarwal
- , Jonathan Chávez-Casillas
- & Colleen B. Mouw
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Article
| Open AccessSkillful multiyear prediction of marine habitat shifts jointly constrained by ocean temperature and dissolved oxygen
Here, the authors show that multiyear prediction of marine habitat shifts can be skillfully accomplished by combining trait based aerobic habitat constraints with a suite of initialized retrospective Earth System Model temperature forecasts.
- Zhuomin Chen
- , Samantha Siedlecki
- & Curtis A. Deutsch
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Article
| Open AccessEfficient biological carbon export to the mesopelagic ocean induced by submesoscale fronts
Submesoscale processes are ubiquitous in the North Pacific Subtropical Gyre. The authors show that carbon export efficiency is significantly strengthened under the influence of these episodic features by using high-frequency BGC-Argo observations.
- Mingxian Guo
- , Xiaogang Xing
- & Fei Chai
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Article
| Open AccessDisentangling microbial networks across pelagic zones in the tropical and subtropical global ocean
This study investigates the dynamic associations among microbes in the world’s tropical and subtropical oceans. It reveals that potential interactions vary with ocean depth and location, with most surface associations not persisting in deeper waters. The results contribute to understanding the ocean microbiome in the context of global change.
- Ina M. Deutschmann
- , Erwan Delage
- & Ramiro Logares
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Article
| Open AccessAnchovy boom and bust linked to trophic shifts in larval diet
A characteristic of costal-pelagic fishes is their large population size fluctuations, yet the drivers remain elusive. Here, the authors analyze a 45-year timeseries of nitrogen stable isotopes measured in larvae of Northern Anchovy and find that high energy transfer efficiency from the base of the food web up to young larvae confers high survival and recruitment to the adult population.
- Rasmus Swalethorp
- , Michael R. Landry
- & Andrew R. Thompson
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Article
| Open AccessMicroplastic burden in marine benthic invertebrates depends on species traits and feeding ecology within biogeographical provinces
Microplastic uptake by animals is often assumed to reflect the level of contamination in the environment. Here, the authors compile a global inventory of individual microplastic body burden in benthic marine invertebrates and find that feeding mode and geographic location are more important predictors than environmental microplastic loading.
- Adam Porter
- , Jasmin A. Godbold
- & Tamara S. Galloway
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Article
| Open AccessVolcaniclastic density currents explain widespread and diverse seafloor impacts of the 2022 Hunga Volcano eruption
During the 2022 Hunga Volcano eruption, 10 km3 of seafloor material was removed, fueling long-run out seafloor density currents. These powerful currents damaged seafloor cables over a length of >100 km, reshaped the seafloor, and caused mass-mortality of seafloor life.
- Sarah Seabrook
- , Kevin Mackay
- & Michael J. M. Williams
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Article
| Open AccessThermal sensitivity of field metabolic rate predicts differential futures for bluefin tuna juveniles across the Atlantic Ocean
In this study, the authors use a dataset of stable isotope compositions of otoliths from Atlantic bluefin tuna to infer the thermal sensitivity of metabolic performance in their first year of life. They then assess the likely trajectories of tuna production until end century under differing emission scenarios in their two main spawning grounds, the western Atlantic and Mediterranean Sea.
- Clive N. Trueman
- , Iraide Artetxe-Arrate
- & Igaratza Fraile
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Article
| Open AccessExperimental mining plumes and ocean warming trigger stress in a deep pelagic jellyfish
The deep ocean is increasingly subjected to human-induced environmental change, but little is known about species-specific responses to stressors, including those from deep sea mining. This study shows that elevated temperatures and simulated sediment plumes cause physiological stress in a cosmopolitan deep-sea jellyfish, confirming the detrimental impact of seabed mining.
- Vanessa I. Stenvers
- , Helena Hauss
- & Henk-Jan T. Hoving
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Article
| Open AccessDeep-sea origin and depth colonization associated with phenotypic innovations in scleractinian corals
Scleractinian corals are important in both shallow and deep ecosystems. Here, the authors use global spatial distribution data with a phylogenetic approach to examine directionality and speed of colonization during depth diversification, finding an offshore-onshore pattern of evolution and that depth dispersion is associated with phenotypic innovations.
- Ana N. Campoy
- , Marcelo M. Rivadeneira
- & Chris Venditti
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Article
| Open AccessShort-term acidification promotes diverse iron acquisition and conservation mechanisms in upwelling-associated phytoplankton
Coastal upwelling regions are among the most productive marine ecosystems but may be threatened by amplified ocean acidification. Here the authors show from community to molecular levels that phytoplankton in an upwelling region respond to short-term acidification exposure with iron uptake pathways and strategies that reduce cellular iron demand.
- Robert H. Lampe
- , Tyler H. Coale
- & Andrew E. Allen
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Article
| Open AccessCoupled carbon and nitrogen cycling regulates the cnidarian–algal symbiosis
Photosymbioses enable efficient nutrient recycling between heterotrophic and phototrophic organisms. This study shows that nutrient cycling in a cnidarian-algal symbiosis is regulated through resource competition between symbiotic partners. Mutualistic interactions can therefore emerge from mutual exploitation in nutrient–exchange symbioses.
- Nils Rädecker
- , Stéphane Escrig
- & Anders Meibom
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Article
| Open AccessA carbon-nitrogen negative feedback loop underlies the repeated evolution of cnidarian–Symbiodiniaceae symbioses
This study found that cnidarian animals including corals, anemones and jellyfish share a common mechanism to regulate their association with symbiotic algae. Despite evolving independently, these animals all use the same carbon-nitrogen negative feedback loop for algae control, shedding light on the repeated evolution of these marine symbiotic relationships.
- Guoxin Cui
- , Jianing Mi
- & Manuel Aranda
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Article
| Open AccessCoral endosymbiont growth is enhanced by metabolic interactions with bacteria
A new study reveals that bacterial partners supply essential metabolites to the vital microalgal symbionts of corals, including metabolites that boost symbiont growth. This breakthrough increases our understanding of coral microbial ecology and also opens the door to innovative ways of protecting coral reefs.
- Jennifer L. Matthews
- , Abeeha Khalil
- & Jean-Baptiste Raina
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Article
| Open AccessMesophotic coral bleaching associated with changes in thermocline depth
Rising global temperatures cause widespread bleaching of shallow coral reefs but mesophotic reefs at depths over 30 metres are thought to be sheltered by cooler waters. Here, at sites in the Chagos Archipelago, the authors show bleaching of corals at depths of 90 metres, which might be due to warm surface waters being pushed deeper by the ocean’s response to the Indian Ocean Dipole.
- Clara Diaz
- , Nicola L. Foster
- & Phil Hosegood
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Article
| Open AccessCryo-EM structure of cyanophage P-SCSP1u offers insights into DNA gating and evolution of T7-like viruses
Here the authors unveil the assembly of a cyanophage in its native form, providing insights into DNA gating and infection process of tailed phages. They proposed structure-based analysis for virus evolution and classification.
- Lanlan Cai
- , Hang Liu
- & Shangyu Dang
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Article
| Open AccessGenomic adaptation of giant viruses in polar oceans
This study examines the biogeography and functional gene repertoires of marine eukaryote-infecting large and giant DNA viruses. It shows a clear divide in the viral communities between polar and nonpolar environments, with recurrent evolutionary adaptations to the polar environment likely driven by alterations of their genomic functions.
- Lingjie Meng
- , Tom O. Delmont
- & Hiroyuki Ogata
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Article
| Open AccessMarine viruses disperse bidirectionally along the natural water cycle
Here, the authors provide evidence that marine viruses spread via aerosolization and rain through the natural water cycle. Hosts from the first centimeters of the marine water column show signs of immunity against rain viruses. Those have DNA adaptations facilitating their stay in the air.
- Janina Rahlff
- , Sarah P. Esser
- & Alexander J. Probst
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Article
| Open AccessNutrient and arsenic biogeochemistry of Sargassum in the western Atlantic
The Great Atlantic Sargassum Belt is a hazard for coastal communities. Elevated N and P in the GASB are measured, with As content reflecting P limitation. Nutrient availability causes GASB blooms but reducing P would increase As accumulation.
- Dennis Joseph McGillicuddy Jr.
- , Peter Lynn Morton
- & Brian Edward Lapointe
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Article
| Open AccessEcological mechanisms and current systems shape the modular structure of the global oceans’ prokaryotic seascape
This study investigated how ecological mechanisms and large-scale oceanic current systems shape prokaryotic microbial community patterns. They show that prokaryotic communities in the upper 200 m of the Pacific and Atlantic Ocean, the southern Indian Ocean, and the Mediterranean Sea have a modular structure of co-occurring taxa with similar environmental preferences.
- Felix Milke
- , Jens Meyerjürgens
- & Meinhard Simon
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Article
| Open AccessA Lagrangian model for drifting ecosystems reveals heterogeneity-driven enhancement of marine plankton blooms
Modelling a planktonic ecosystem in the ocean is challenging as it is embedded in a patch of water that is continuously moving, stretching, and diluting. This study introduces a new theoretical framework to account for such aspects, tracking a patch of water hosting a drifting ecosystem, along with its physical, environmental and biochemical features.
- Enrico Ser-Giacomi
- , Ricardo Martinez-Garcia
- & Michael J. Follows
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Article
| Open AccessComposition of cetacean communities worldwide shapes their contribution to ocean nutrient cycling
Cetaceans such as dolphins and whales contribute to the cycling of essential nutrients in the surface ocean through defecation. Using a bioenergetic modelling approach, this study shows that the contribution of different cetaceans is heterogeneous both in terms of quantity and in quality, as the nutrient cocktails they release reflect the physiology and ecology of each species.
- Lola Gilbert
- , Tiphaine Jeanniard-du-Dot
- & Jérôme Spitz
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Article
| Open AccessImpacts of marine heatwaves on top predator distributions are variable but predictable
This study examines the effect of four marine heatwaves in the Northeast Pacific on the distributions of 14 top predators, revealing a wide-array of predator responses both among and within heatwaves. Predator responses were highly predictable, demonstrating capacity for early warning systems of heatwave impacts, similar to weather forecasts.
- Heather Welch
- , Matthew S. Savoca
- & Elliott L. Hazen
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Article
| Open AccessSustainable reference points for multispecies coral reef fisheries
The sustainability of the majority of multispecies reef fisheries around the globe remains unassessed. This study provides context-specific sustainable reference points for coral reef fish using environmental conditions. Using these reference points, they show that most reef fish stocks have failed at least one fisheries sustainability benchmark.
- Jessica Zamborain-Mason
- , Joshua E. Cinner
- & Sean R. Connolly
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Article
| Open AccessCryopreservation and revival of Hawaiian stony corals using isochoric vitrification
Cryopreservation is one approach to conserving the genetic diversity of threatened coral reefs but has thus far been limited to difficult-to-obtain coral reproductive material. Using a new cytotechnology called isochoric vitrification, this study reports the successful cryopreservation and revival of whole mature coral fragments.
- Matthew J. Powell-Palm
- , E. Michael Henley
- & Mary Hagedorn
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Article
| Open AccessEmergent increase in coral thermal tolerance reduces mass bleaching under climate change
Marine heatwaves and mass bleaching mortality events threaten the persistence of coral communities on tropical reefs. This study demonstrates that the thermal tolerance of coral communities in Palau has likely increased since the late 1980s. Such ecological resilience could reduce future bleaching impacts if global carbon emissions are cut down.
- Liam Lachs
- , Simon D. Donner
- & James R. Guest
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Article
| Open AccessGlobal analysis of ocean phytoplankton nutrient limitation reveals high prevalence of co-limitation
Nutrient limitation is a key constraint on ocean productivity. Here, by analysing a compilation of field experiments spanning the global ocean, this study shows that increasing the number of different nutrients supplied significantly increases net phytoplankton growth, suggesting multiple nutrients are often approaching co-limiting levels.
- Thomas J. Browning
- & C. Mark Moore
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Article
| Open AccessDiversity, distribution and intrinsic extinction vulnerability of exploited marine bivalves
Marine bivalves are important components of ecosystems and are exploited for food across the world. This study expands the list of marine bivalves known to be exploited worldwide and then uses a trait-based approach to identify intrinsically vulnerable species and to pinpoint regions with high levels of extinction-prone exploited species, helping to prioritize areas for conservation effort.
- Shan Huang
- , Stewart M. Edie
- & David Jablonski
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Article
| Open AccessSystematic review of cnidarian microbiomes reveals insights into the structure, specificity, and fidelity of marine associations
This study unified cnidarian microbiome data from 186 studies (~ 6.5 billion sequence reads), providing novel insights into cnidarian microbial communities and highlighting key bacteria across sub-phylum, geography, depth and microhabitat. Understanding factors governing microbiome health will support ongoing and future coral preservation efforts.
- M. McCauley
- , T. L. Goulet
- & S. Loesgen
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Article
| Open AccessThe role and risks of selective adaptation in extreme coral habitats
Corals living in naturally extreme environments such as mangrove lagoons have been considered as ‘super corals’ for reef conservation. However, this study shows that resistance in highly variable conditions comes with biological trade-offs that could compromise the suitability of these stress-tolerant corals for reef management under worsening climate change conditions.
- Federica Scucchia
- , Paul Zaslansky
- & Emma F. Camp
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Matters Arising
| Open AccessOcean afforestation is a potentially effective way to remove carbon dioxide
- Wei-Lei Wang
- , Mar Fernández-Méndez
- & Minhan Dai
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Article
| Open AccessGlobal assessment of marine plastic exposure risk for oceanic birds
Petrels are wide-ranging, highly threatened seabirds that often ingest plastic. This study used tracking data for 7,137 petrels of 77 species to map global exposure risk and compare regions, species, and populations. The results show higher exposure risk for threatened species and stress the need for international cooperation to tackle marine litter.
- Bethany L. Clark
- , Ana P. B. Carneiro
- & Maria P. Dias
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Article
| Open AccessOxygen availability and body mass modulate ectotherm responses to ocean warming
This study presents an absolute metabolic index that quantifies how ocean temperature, dissolved oxygen and organismal mass interact to constrain the oxygen budget an organism can use to fuel aerobic metabolism. The index is calibrated with physiological measurements from purple sea urchin and red abalone and the authors test if the index can delimit the distribution of these two species.
- Murray I. Duncan
- , Fiorenza Micheli
- & Erik A. Sperling
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Article
| Open AccessA joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores
Coccolithophorid algae are globally important for marine biogeochemical cycles, but the molecular basis of their biology is poorly understood. Using proteomics and a new genome, Skeffington et al. identify candidate proteins involved in calcification in Emiliania huxleyi.
- Alastair Skeffington
- , Axel Fischer
- & André Scheffel
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Article
| Open AccessRelationships of temperature and biodiversity with stability of natural aquatic food webs
Climate change effects on food webs may be modulated by ecological variables. Here, the authors report how planktonic food web stability depends on temperature and biodiversity, and show that trophic dynamics and synchrony help elucidate the patterns.
- Qinghua Zhao
- , Paul J. Van den Brink
- & Frederik De Laender
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Comment
| Open AccessInsights and achievements from the Tara Pacific expedition
The Tara Pacific program and expedition focused on coral reefs across the Pacific Ocean and used a coordinated sampling effort to address questions at multiple scales using a common suite of samples. Here, we highlight some of the Tara Pacific achievements, discussing the benefits of long-duration sea expeditions for investigating a wide array of research questions within a selected ecosystem.
- Serge Planes
- & Denis Allemand
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Article
| Open AccessHost transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean
Using data from the Tara Pacific expedition to investigate symbiont fidelity and patterns of gene expression across a thermal gradient, this study shows that Pocillopora corals have a three-tiered strategy of thermal acclimatization that is underpinned by host–photosymbiont specificity, host transcriptomic plasticity, and differential photosymbiotic associations under extreme warming.
- Eric J. Armstrong
- , Julie Lê-Hoang
- & Patrick Wincker
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Article
| Open AccessStony coral tissue loss disease induces transcriptional signatures of in situ degradation of dysfunctional Symbiodiniaceae
From profiling the gene expression of five coral species exposed to Stony Coral Tissue Loss Disease (SCTLD), this study finds signatures of in situ degradation of Symbiodiniaceae experiencing photosystem dysfunction. These results indicate that Symbiodiniaceae may be the target of initial SCTLD infection, which subsequently induces host responses and tissue loss.
- Kelsey M. Beavers
- , Emily W. Van Buren
- & Laura D. Mydlarz
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Article
| Open AccessGlobal disruption of coral broadcast spawning associated with artificial light at night
This global analysis reveals that artificial light from cities is associated with the disruption of synchronised egg release by corals. This situation could reduce coral reproductive health, hindering conservation efforts in the face of climate change and other anthropogenic impacts.
- Thomas W. Davies
- , Oren Levy
- & Tim Smyth
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Comment
| Open AccessPhosphate limitation and ocean acidification co-shape phytoplankton physiology and community structure
This Comment discusses the complexity of how ocean acidification and phosphate limitation affect phytoplankton physiologies, as well as what future research is needed to address remaining crucial questions.
- Senjie Lin
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Article
| Open AccessWhat the geological past can tell us about the future of the ocean’s twilight zone
Combining geological evidence and modelling, Crichton and others find life in the ocean Twilight Zone (200 m to 1000 m depth) is vulnerable to warming due to lower food supply. High emissions may lead to severe depletion and extinction in this habitat
- Katherine A. Crichton
- , Jamie D. Wilson
- & Paul N. Pearson