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| Open AccessCommunicating doctors’ consensus persistently increases COVID-19 vaccinations
Correcting public misperceptions about the views of doctors on the COVID-19 vaccines can have lasting impacts on public uptake of the COVID-19 vaccines.
- Vojtěch Bartoš
- , Michal Bauer
- & Julie Chytilová
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Matters Arising |
Evidence from a statewide vaccination RCT shows the limits of nudges
- Nathaniel Rabb
- , Megan Swindal
- & David Yokum
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Article |
The power of genetic diversity in genome-wide association studies of lipids
A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.
- Sarah E. Graham
- , Shoa L. Clarke
- & Cristen J. Willer
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Article |
Efficient and targeted COVID-19 border testing via reinforcement learning
A study reports the design and performance of a reinforcement learning algorithm that enabled efficient and targeted SARS-CoV-2 testing of passengers travelling to Greece in the summer of 2020.
- Hamsa Bastani
- , Kimon Drakopoulos
- & Sotirios Tsiodras
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Article |
Caloric restriction disrupts the microbiota and colonization resistance
Severe caloric restriction in humans leads to reversible changes in the gut microbiota that promote weight loss and the expansion of an enteric pathogen in mice.
- Reiner Jumpertz von Schwartzenberg
- , Jordan E. Bisanz
- & Peter J. Turnbaugh
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Article |
BNT162b2 vaccine induces neutralizing antibodies and poly-specific T cells in humans
In a phase-I/II trial in healthy adults, the BNT162b2 vaccine induces neutralizing antibodies and poly-specific T cells against SARS-CoV-2 epitopes that are conserved in a wide range of currently circulating variants.
- Ugur Sahin
- , Alexander Muik
- & Özlem Türeci
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Article |
AI-based pathology predicts origins for cancers of unknown primary
A deep-learning-based algorithm uses routinely acquired histology slides to provide a differential diagnosis for the origin of the primary tumour for complicated cases of metastatic tumours and cancers of unknown primary origin.
- Ming Y. Lu
- , Tiffany Y. Chen
- & Faisal Mahmood
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Article |
Multi-kingdom ecological drivers of microbiota assembly in preterm infants
Absolute microbial abundances delineate longitudinal dynamics of bacteria, fungi and archaea in the infant gut microbiome, uncovering drivers of microbiome development masked by relative abundances and revealing notable parallels to macroscopic ecosystem assemblies.
- Chitong Rao
- , Katharine Z. Coyte
- & Seth Rakoff-Nahoum
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Article
| Open AccessMapping routine measles vaccination in low- and middle-income countries
Although progress in the coverage of routine measles vaccination in children in low- and middle-income countries was made during 2000–2019, many countries remain far from the goal of 80% coverage in all districts by 2019.
- Alyssa N. Sbarra
- , Sam Rolfe
- & Jonathan F. Mosser
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Article |
Mobility network models of COVID-19 explain inequities and inform reopening
An epidemiological model that integrates fine-grained mobility networks illuminates mobility-related mechanisms that contribute to higher infection rates among disadvantaged socioeconomic and racial groups, and finds that restricting maximum occupancy at locations is especially effective for curbing infections.
- Serina Chang
- , Emma Pierson
- & Jure Leskovec
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Article |
A pooled testing strategy for identifying SARS-CoV-2 at low prevalence
A mathematical algorithm for population-wide screening of SARS-CoV-2 infections using pooled parallel RT–PCR tests requires considerably fewer tests than individual testing procedures and has minimal delays in the identification of individuals infected with SARS-CoV-2.
- Leon Mutesa
- , Pacifique Ndishimye
- & Wilfred Ndifon
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Matters Arising |
Reply to: Transparency and reproducibility in artificial intelligence
- Scott Mayer McKinney
- , Alan Karthikesalingam
- & Shravya Shetty
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Review Article |
Illuminating the dark spaces of healthcare with ambient intelligence
Breakthroughs in artificial intelligence and low-cost, contactless sensors have given rise to an ambient intelligence that can potentially improve the physical execution of healthcare delivery, if used in a thoughtful manner.
- Albert Haque
- , Arnold Milstein
- & Li Fei-Fei
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Article |
A vaccine targeting the RBD of the S protein of SARS-CoV-2 induces protective immunity
A recombinant vaccine that targets the receptor-binding domain of the spike protein of SARS-CoV-2 induces a potent antibody response in immunized mice, rabbits and non-human primates, and protects primates from infection with the virus.
- Jingyun Yang
- , Wei Wang
- & Xiawei Wei
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Article |
Reconstruction of the full transmission dynamics of COVID-19 in Wuhan
Analysis of the full-spectrum transmission dynamics of COVID-19 in Wuhan reveals that multipronged non-pharmaceutical interventions were effective in controlling the outbreak, and highlights that covert infections may pose risks of resurgence when reopening without intervention measures.
- Xingjie Hao
- , Shanshan Cheng
- & Chaolong Wang
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Factors associated with COVID-19-related death using OpenSAFELY
OpenSAFELY, a new health analytics platform that includes data from over 17 million adult NHS patients in England, is used to examine factors associated with COVID-19-related death.
- Elizabeth J. Williamson
- , Alex J. Walker
- & Ben Goldacre
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Article |
Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe
Modelling based on pooled data from 11 European countries indicates that non-pharmaceutical interventions—particularly lockdowns—have had a marked effect on SARS-CoV-2 transmission, driving the reproduction number of the infection below 1.
- Seth Flaxman
- , Swapnil Mishra
- & Samir Bhatt
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Article |
A human neutralizing antibody targets the receptor-binding site of SARS-CoV-2
Two monoclonal antibodies isolated from a patient with COVID-19 are shown to interfere with SARS-CoV-2–receptor binding, and one displays potent action against this virus in vitro and in a rhesus macaque model.
- Rui Shi
- , Chao Shan
- & Jinghua Yan
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The online competition between pro- and anti-vaccination views
Insights into the interactions between pro- and anti-vaccination clusters on Facebook can enable policies and approaches that attempt to interrupt the shift to anti-vaccination views and persuade undecided individuals to adopt a pro-vaccination stance.
- Neil F. Johnson
- , Nicolas Velásquez
- & Yonatan Lupu
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Effect of non-pharmaceutical interventions to contain COVID-19 in China
A model of the effects of different non-pharmaceutical interventions on the spread of COVID-19 in China suggests that a strategy involving the rapid implementation of a combination of interventions is most effective.
- Shengjie Lai
- , Nick W. Ruktanonchai
- & Andrew J. Tatem
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Population flow drives spatio-temporal distribution of COVID-19 in China
Modelling of population flows in China enables the forecasting of the distribution of confirmed cases of COVID-19 and the identification of areas at high risk of SARS-CoV-2 transmission at an early stage.
- Jayson S. Jia
- , Xin Lu
- & Nicholas A. Christakis
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Article
| Open AccessMapping 123 million neonatal, infant and child deaths between 2000 and 2017
A high-resolution, global atlas of mortality of children under five years of age between 2000 and 2017 highlights subnational geographical inequalities in the distribution, rates and absolute counts of child deaths by age.
- Roy Burstein
- , Nathaniel J. Henry
- & Simon I. Hay
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Letter |
Harnessing global fisheries to tackle micronutrient deficiencies
Nutrient content analyses of marine finfish and current fisheries landings show that fish have the potential to substantially contribute to global food and nutrition security by alleviating micronutrient deficiencies in regions where they are prevalent.
- Christina C. Hicks
- , Philippa J. Cohen
- & M. Aaron MacNeil
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Letter |
Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth
Delivery via caesarean section, maternal antibiotic prophylaxis and colonization by opportunistic pathogens associated with the hospital environment affect the composition of the gut microbiota of children from birth until infancy.
- Yan Shao
- , Samuel C. Forster
- & Trevor D. Lawley
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Letter |
A clinically applicable approach to continuous prediction of future acute kidney injury
A deep learning approach that predicts the risk of acute kidney injury may help to identify patients at risk of health deterioration within a time window that enables early treatment.
- Nenad Tomašev
- , Xavier Glorot
- & Shakir Mohamed
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Article |
Mapping human microbiome drug metabolism by gut bacteria and their genes
High-throughput genetic analyses combined with mass spectrometry reveal that the gene products of diverse human gut bacteria affect a wide range of oral drugs, as well as drug metabolism in mice.
- Michael Zimmermann
- , Maria Zimmermann-Kogadeeva
- & Andrew L. Goodman
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Article
| Open AccessMapping HIV prevalence in sub-Saharan Africa between 2000 and 2017
Fine-scale estimates of the prevalence of HIV in adults across sub-Saharan Africa reveal substantial within-country variation and local differences in both the direction and rate of change in the prevalence of HIV between 2000 and 2017.
- Laura Dwyer-Lindgren
- , Michael A. Cork
- & Simon I. Hay
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Review Article |
Taking connected mobile-health diagnostics of infectious diseases to the field
Combining mobile phone technologies with infectious disease diagnostics can increase patients’ access to testing and treatment and provide public health authorities with new ways to monitor and control outbreaks of infectious diseases.
- Christopher S. Wood
- , Michael R. Thomas
- & Molly M. Stevens
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Letter
| Open AccessThe human gut microbiome in early-onset type 1 diabetes from the TEDDY study
An analysis of more than 10,000 metagenomes from the TEDDY study provides a detailed functional profile of the gut microbiome in relation to islet autoimmunity, and supports the protective effects of short-chain fatty acids in early-onset type 1 diabetes.
- Tommi Vatanen
- , Eric A. Franzosa
- & Ramnik J. Xavier
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Review Article |
Facing up to the global challenges of ageing
Longer human lives have led to a global burden of late-life disease, and so interventions, including changes to lifestyle and medical innovations, are needed to prevent disease and increase late-life health.
- Linda Partridge
- , Joris Deelen
- & P. Eline Slagboom
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Article |
Targeted therapy in patients with PIK3CA-related overgrowth syndrome
A PI3KCA inhibitor reverses symptoms in a mouse model of PROS/CLOVES syndrome, which results from gain-of-function mutations in PI3KCA, and produces improvements in patients with PROS/CLOVES syndrome.
- Quitterie Venot
- , Thomas Blanc
- & Guillaume Canaud
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Brief Communications Arising |
Improving outcomes in congenital cataract
- Ameenat Lola Solebo
- , Christopher J. Hammond
- & Jugnoo S. Rahi
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Review Article |
The biology and management of non-small cell lung cancer
- Roy S. Herbst
- , Daniel Morgensztern
- & Chris Boshoff
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Letter |
Moving beyond microbiome-wide associations to causal microbe identification
Triangulation of microbe–phenotype relationships is an effective method for reducing the noise inherent in microbiota studies and enabling identification of causal microbes of disease, which may be applicable to human microbiome studies.
- Neeraj K. Surana
- & Dennis L. Kasper
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Letter
| Open AccessLandscape of X chromosome inactivation across human tissues
Multiple transcriptome approaches, including single-cell sequencing, demonstrate that escape from X chromosome inactivation is widespread and occasionally variable between cells, chromosomes, and tissues, resulting in sex-biased expression of at least 60 genes and potentially contributing to sex-specific differences in health and disease.
- Taru Tukiainen
- , Alexandra-Chloé Villani
- & Daniel G. MacArthur
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Letter |
Large-scale physical activity data reveal worldwide activity inequality
A huge smartphone dataset of physical activity yields global insights, revealing that activity inequality predicts obesity better than does volume of activity and that much of the inequality is a result of reduced activity in females.
- Tim Althoff
- , Rok Sosič
- & Jure Leskovec
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Brief Communications Arising |
Many possible maximum lifespan trajectories
- Bryan G. Hughes
- & Siegfried Hekimi
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Brief Communications Arising |
Questionable evidence for a limit to human lifespan
- Adam Lenart
- & James W. Vaupel
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Brief Communications Arising |
Is there evidence for a limit to human lifespan?
- Maarten P. Rozing
- , Thomas B. L. Kirkwood
- & Rudi G. J. Westendorp
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Letter |
Dermatologist-level classification of skin cancer with deep neural networks
An artificial intelligence trained to classify images of skin lesions as benign lesions or malignant skin cancers achieves the accuracy of board-certified dermatologists.
- Andre Esteva
- , Brett Kuprel
- & Sebastian Thrun
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Brief Communications Arising |
Lifespan effects of mitochondrial mutations
- Misa Hirose
- , Paul Schilf
- & Saleh M. Ibrahim
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Letter |
Evidence for a limit to human lifespan
Demographic analysis of life expectancy and maximum reported age at death provides evidence that human lifespan has reached its natural limit.
- Xiao Dong
- , Brandon Milholland
- & Jan Vijg
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Review Article |
Microbiome-wide association studies link dynamic microbial consortia to disease
- Jack A. Gilbert
- , Robert A. Quinn
- & Rob Knight
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Letter |
Fully integrated wearable sensor arrays for multiplexed in situ perspiration analysis
By merging plastic-based skin sensors with silicon integrated circuits, a flexible, wearable perspiration analysis system is presented that measures skin temperature and the metabolites and electrolytes in human sweat and analyses the information in situ.
- Wei Gao
- , Sam Emaminejad
- & Ali Javey
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