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Bashing irreproducibility with shournal
- Tycho Kirchner
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Sexual dimorphism during integrative endocrine and immune responses to ionizing radiation in mice
- Marissa Burke
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Tuning attention based long-short term memory neural networks for Parkinson’s disease detection using modified metaheuristics
- Aleksa Cuk
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Early stage black pepper leaf disease prediction based on transfer learning using ConvNets
- Anita S. Kini
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Utilization of discarded face masks in combination with recycled concrete aggregate and silica fume for sustainable civil construction projects
- Fahad Amin
- , Muhammad Faisal Javed
- & Emad A. A. Ismail
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Transfer learning for versatile and training free high content screening analyses
- Maxime Corbe
- , Gaëlle Boncompain
- & Auguste Genovesio
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surviveR: a flexible shiny application for patient survival analysis
- Tamas Sessler
- , Gerard P. Quinn
- & Simon S. McDade
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Forecasting local hospital bed demand for COVID-19 using on-request simulations
- Raisa Kociurzynski
- , Angelo D’Ambrosio
- & Tjibbe Donker
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An expandable voice user interface as lab assistant based on an improved version of Google’s speech recognition
- Maria Fernanda Avila Vazquez
- , Nicole Rupp
- & Thole Zuchner
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General, open-source vertex modeling in biological applications using Tissue Forge
- T. J. Sego
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- & James A. Glazier
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Geographically distributed data management to support large-scale data analysis
- Tamer Z. Emara
- , Thanh Trinh
- & Joshua Zhexue Huang
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Novel Alzheimer’s disease genes and epistasis identified using machine learning GWAS platform
- Mischa Lundberg
- , Letitia M. F. Sng
- & Natalie A. Twine
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M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
- Jingqi Yang
- , Qing Shangguan
- & Guotai Sheng
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Metagenomic profiling pipelines improve taxonomic classification for 16S amplicon sequencing data
- Aubrey R. Odom
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- & W. Evan Johnson
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Investigating the novel-binding site of RPA2 on Menin and predicting the effect of point mutation of Menin through protein–protein interactions
- Gurjeet Kaur
- , Manisha Prajapat
- & Bikash Medhi
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Prediction of protein subplastid localization and origin with PlastoGram
- Katarzyna Sidorczuk
- , Przemysław Gagat
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Deep learning for multi-class semantic segmentation enables colorectal cancer detection and classification in digital pathology images
- John-Melle Bokhorst
- , Iris D. Nagtegaal
- & Francesco Ciompi
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Non-targeted detection of food adulteration using an ensemble machine-learning model
- Teresa Chung
- , Issan Yee San Tam
- & Lok-Ting Lau
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Artificial neural network-based model to predict the effect of γ-aminobutyric acid on salinity and drought responsive morphological traits in pomegranate
- Saeedeh Zarbakhsh
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DNA methylation landscapes from pig’s limbic structures underline regulatory mechanisms relevant for brain plasticity
- Alvaro Perdomo-Sabogal
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An open-source computational tool for measuring bacterial biofilm morphology and growth kinetics upon one-sided exposure to an antimicrobial source
- Sarah Gingichashvili
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- & Noa E. Cohen
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Predicting and preventing COVID-19 outbreaks in indoor environments: an agent-based modeling study
- Mardochee Reveil
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Cloud-enabled Biodepot workflow builder integrates image processing using Fiji with reproducible data analysis using Jupyter notebooks
- Ling-Hong Hung
- , Evan Straw
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Efficient enumeration-selection computational strategy for adaptive chemistry
- Yachong Guo
- , Marco Werner
- & Vladimir A. Baulin
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QOGMP: QoS-oriented global multi-path traffic scheduling algorithm in software defined network
- Yiping Guo
- , Guyu Hu
- & Dongsheng Shao
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Binary dose level classification of tumour microvascular response to radiotherapy using artificial intelligence analysis of optical coherence tomography images
- Anamitra Majumdar
- , Nader Allam
- & I. Alex Vitkin
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A deep learning framework for epileptic seizure detection based on neonatal EEG signals
- Artur Gramacki
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Un-biased housekeeping gene panel selection for high-validity gene expression analysis
- Ana I. Casas
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Quantification of acceleration as activity counts in ActiGraph wearable
- Ali Neishabouri
- , Joe Nguyen
- & Christine C. Guo
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A free customizable tool for easy integration of microfluidics and smartphones
- Federico Schaumburg
- , Juan P. Vidocevich
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Analyzing historical and future acute neurosurgical demand using an AI-enabled predictive dashboard
- Anand S. Pandit
- , Arif H. B. Jalal
- & Parashkev Nachev
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QSAR analysis on a large and diverse set of potent phosphoinositide 3-kinase gamma (PI3Kγ) inhibitors using MLR and ANN methods
- Fereydoun Sadeghi
- , Abbas Afkhami
- & Raouf Ghavami
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Queueing theory model of pentose phosphate pathway
- Sylwester M. Kloska
- , Krzysztof Pałczyński
- & Tadeusz A. Wysocki
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An emotional discrete controller PSO tuned and designed for a real industrial pumping system
- Davidson C. Marques
- , Jeydson L. Silva
- & Ronaldo R. B. Aquino
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Interactions of Co, Cu, and non-metal phthalocyanines with external structures of SARS-CoV-2 using docking and molecular dynamics
- Wilson Luna Machado Alencar
- , Tiago da Silva Arouche
- & Antonio Maia de Jesus Chaves Neto
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Survival Genie, a web platform for survival analysis across pediatric and adult cancers
- Bhakti Dwivedi
- , Hope Mumme
- & Manoj Bhasin
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Ensemble learning from ensemble docking: revisiting the optimum ensemble size problem
- Sara Mohammadi
- , Zahra Narimani
- & Mohammad Hossein Karimi‐Jafari
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Design considerations for workflow management systems use in production genomics research and the clinic
- Azza E. Ahmed
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Wireless signal modulation identification method based on RF I/Q data distribution
- Lihui Wang
- , Zhenjia Chen
- & Yonghui Zhang
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Scaling up DNA digital data storage by efficiently predicting DNA hybridisation using deep learning
- David Buterez
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HTSQualC is a flexible and one-step quality control software for high-throughput sequencing data analysis
- Renesh Bedre
- , Carlos Avila
- & Kranthi Mandadi
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SpheroidPicker for automated 3D cell culture manipulation using deep learning
- Istvan Grexa
- , Akos Diosdi
- & Peter Horvath
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Unveiling the third dimension in morphometry with automated quantitative volumetric computations
- Lawrence R. Frank
- , Timothy B. Rowe
- & Vitaly L. Galinsky
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Integrative analysis of key candidate genes and signaling pathways in acute coronary syndrome related to obstructive sleep apnea by bioinformatics
- Yanxi Shi
- , Zhengye Jiang
- & Jianjiang Xu
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Introducing the novel Cytoscape app TimeNexus to analyze time-series data using temporal MultiLayer Networks (tMLNs)
- Michaël Pierrelée
- , Ana Reynders
- & Bianca H. Habermann
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KAUST Metagenomic Analysis Platform (KMAP), enabling access to massive analytics of re-annotated metagenomic data
- Intikhab Alam
- , Allan Anthony Kamau
- & Vladimir B. Bajic
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Predicting MHC I restricted T cell epitopes in mice with NAP-CNB, a novel online tool
- Carlos Wert-Carvajal
- , Rubén Sánchez-García
- & Arrate Muñoz-Barrutia
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Multi-step screening of neoantigens’ HLA- and TCR-interfaces improves prediction of survival
- Guilhem Richard
- , Anne S. De Groot
- & Randy F. Sweis
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K-means quantization for a web-based open-source flow cytometry analysis platform
- Nathan Wong
- , Daehwan Kim
- & Irina M. Conboy
A new R package to parse plant species occurrence records into unique collection events efficiently reduces data redundancy