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| Open AccessQM/MM free energy Simulations of an efficient Gluten Hydrolase (Kuma030) Implicate for a Reactant-State Based Protein-Design Strategy for General Acid/Base Catalysis
- Xia Wang
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- & Jianzhuang Yao
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| Open AccessApplications of Bayesian network models in predicting types of hematological malignancies
- Rupesh Agrahari
- , Amir Foroushani
- & Habil Zare
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| Open AccessSynchronization by uncorrelated noise: interacting rhythms in interconnected oscillator networks
- John Hongyu Meng
- & Hermann Riecke
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| Open AccessInvestigation of immunogenic properties of Hemolin from silkworm, Bombyx mori as carrier protein: an immunoinformatic approach
- Veeranarayanan Surya Aathmanathan
- , Nattarsingam Jothi
- & Muthukalingan Krishnan
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| Open AccessExploring Leptospiral proteomes to identify potential candidates for vaccine design against Leptospirosis using an immunoinformatics approach
- Kumari Snehkant Lata
- , Swapnil Kumar
- & Jayashankar Das
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| Open AccessDissecting Structure-Encoded Determinants of Allosteric Cross-Talk between Post-Translational Modification Sites in the Hsp90 Chaperones
- Gabrielle Stetz
- , Amanda Tse
- & Gennady M. Verkhivker
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| Open AccessCytoglobin affects tumorigenesis and the expression of ulcerative colitis-associated genes under chemically induced colitis in mice
- Mohammad Yassin
- , Hannelouise Kissow
- & Anders Elm Pedersen
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| Open AccessGenome-wide Analysis of Large-scale Longitudinal Outcomes using Penalization —GALLOP algorithm
- Karolina Sikorska
- , Emmanuel Lesaffre
- & Paul H. C. Eilers
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| Open AccessMetabolic systems analysis of LPS induced endothelial dysfunction applied to sepsis patient stratification
- Sarah McGarrity
- , Ósk Anuforo
- & Óttar Rolfsson
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| Open AccessDNAp: A Pipeline for DNA-seq Data Analysis
- Jason L. Causey
- , Cody Ashby
- & Xiuzhen Huang
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| Open AccessImproved strategy for the curation and classification of kinases, with broad applicability to other eukaryotic protein groups
- Andreas J. Stroehlein
- , Neil D. Young
- & Robin B. Gasser
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| Open AccessInferring a nonlinear biochemical network model from a heterogeneous single-cell time course data
- Yuki Shindo
- , Yohei Kondo
- & Yasushi Sako
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| Open AccessArtifact Removal using Improved GoogLeNet for Sparse-view CT Reconstruction
- Shipeng Xie
- , Xinyu Zheng
- & Yining Hu
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| Open AccessPathway-based dissection of the genomic heterogeneity of cancer hallmarks’ acquisition with SLAPenrich
- Francesco Iorio
- , Luz Garcia-Alonso
- & Julio Saez-Rodriguez
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| Open AccessFunctional and structural characterization of osteocytic MLO-Y4 cell proteins encoded by genes differentially expressed in response to mechanical signals in vitro
- Fanchi Meng
- , Graeme F. Murray
- & Henry J. Donahue
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| Open AccessThree-dimensional computational model simulating the fracture healing process with both biphasic poroelastic finite element analysis and fuzzy logic control
- Monan Wang
- & Ning Yang
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| Open AccessWhole exome sequencing reveals rare variants linked to congenital pouch colon
- Praveen Mathur
- , Krishna Mohan Medicherla
- & Prashanth Suravajhala
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| Open AccessCalibrating facial morphs for use as stimuli in biological studies of social perception
- Sonja Windhager
- , Fred L. Bookstein
- & Katrin Schaefer
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| Open AccessAn Innovative Approach for The Integration of Proteomics and Metabolomics Data In Severe Septic Shock Patients Stratified for Mortality
- Alice Cambiaghi
- , Ramón Díaz
- & Manuela Ferrario
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| Open AccessLong non-coding RNAs involved in the regulatory network during porcine pre-implantation embryonic development and iPSC induction
- Zhong Liang
- , Mu Haiyuan
- & Cao Suying
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| Open AccessComparative systems analysis of the secretome of the opportunistic pathogen Aspergillus fumigatus and other Aspergillus species
- R. P. Vivek-Ananth
- , Karthikeyan Mohanraj
- & Areejit Samal
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| Open AccessIntegrated analysis of microRNA and mRNA expression profiles in rats with selenium deficiency and identification of associated miRNA-mRNA network
- Yanjing Feng
- , Yunjie Xing
- & Dengfeng Gao
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| Open AccessA closer look at cross-validation for assessing the accuracy of gene regulatory networks and models
- Shayan Tabe-Bordbar
- , Amin Emad
- & Saurabh Sinha
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| Open AccessComparative analyses and structural insights of the novel cytochrome P450 fusion protein family CYP5619 in Oomycetes
- Hans Denis Bamal
- , Wanping Chen
- & Khajamohiddin Syed
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| Open AccessA compendium of long non-coding RNAs transcriptional fingerprint in multiple myeloma
- Domenica Ronchetti
- , Luca Agnelli
- & Antonino Neri
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| Open AccessNovel analysis of the Harderian gland transcriptome response to Newcastle disease virus in two inbred chicken lines
- Melissa S. Deist
- , Rodrigo A. Gallardo
- & Susan J. Lamont
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| Open AccessIntegrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources
- Liang-Chin Huang
- , Karen E. Ross
- & Natarajan Kannan
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| Open AccessComparing SVM and ANN based Machine Learning Methods for Species Identification of Food Contaminating Beetles
- Halil Bisgin
- , Tanmay Bera
- & Joshua Xu
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| Open AccessDevelopment of a 3D seed morphological tool for grapevine variety identification, and its comparison with SSR analysis
- Avshalom Karasik
- , Oshrit Rahimi
- & Elyashiv Drori
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| Open AccessGlobal Similarity Method Based on a Two-tier Random Walk for the Prediction of microRNA–Disease Association
- Min Chen
- , Bo Liao
- & Zejun Li
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| Open AccessPresence and User Experience in a Virtual Environment under the Influence of Ethanol: An Explorative Study
- Mario Lorenz
- , Jennifer Brade
- & Niels Hammer
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| Open AccessTowards annotating the plant epigenome: the Arabidopsis thaliana small RNA locus map
- Thomas J. Hardcastle
- , Sebastian Y. Müller
- & David C. Baulcombe
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| Open AccessComparison of an unsupervised machine learning algorithm and surgeon diagnosis in the clinical differentiation of metopic craniosynostosis and benign metopic ridge
- Min-Jeong Cho
- , Rami R. Hallac
- & Alex A. Kane
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| Open AccessA molecular dynamics simulation study decodes the Zika virus NS5 methyltransferase bound to SAH and RNA analogue
- Chih-Hung Chuang
- , Shean-jaw Chiou
- & Yeng-Tseng Wang
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| Open AccessComputational Protein Design with Deep Learning Neural Networks
- Jingxue Wang
- , Huali Cao
- & Yifei Qi
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| Open AccessPopulation Structure Promotes the Evolution of Intuitive Cooperation and Inhibits Deliberation
- Mohsen Mosleh
- & David G. Rand
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| Open AccessSciRide Finder: a citation-based paradigm in biomedical literature search
- Adam Volanakis
- & Konrad Krawczyk
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| Open AccessEvolutionary convergence and divergence in archaeal chromosomal proteins and Chromo-like domains from bacteria and eukaryotes
- Gurmeet Kaur
- , Lakshminarayan M. Iyer
- & L. Aravind
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| Open AccessHeterogeneity Analysis and Diagnosis of Complex Diseases Based on Deep Learning Method
- Xiong Li
- , Liyue Liu
- & Che Wang
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| Open AccessA systems biology approach to predict and characterize human gut microbial metabolites in colorectal cancer
- QuanQiu Wang
- , Li Li
- & Rong Xu
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| Open AccessDeviations of the immune cell landscape between healthy liver and hepatocellular carcinoma
- Nataliya Rohr-Udilova
- , Florian Klinglmüller
- & Michael Trauner
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Article
| Open AccessRecurrent Neural Networks for Multivariate Time Series with Missing Values
- Zhengping Che
- , Sanjay Purushotham
- & Yan Liu
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| Open AccessNIPS, a 3D network-integrated predictor of deleterious protein SAPs, and its application in cancer prognosis
- Bo Wang
- , Jing Li
- & Jing Li
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Article
| Open AccessLignin peroxidase ligand access channel dysfunction in the presence of atrazine
- János Ecker
- & László Fülöp
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Article
| Open AccessAccurate identification of RNA editing sites from primitive sequence with deep neural networks
- Zhangyi Ouyang
- , Feng Liu
- & Wenjie Shu
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| Open AccessPan-cancer analysis of somatic mutations and transcriptomes reveals common functional gene clusters shared by multiple cancer types
- Hyeongmin Kim
- & Yong-Min Kim
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| Open AccessIdentification of human glycosyltransferase genes expressed in erythroid cells predicts potential carbohydrate blood group loci
- Magnus Jöud
- , Mattias Möller
- & Martin L. Olsson
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Article
| Open AccessDiffusion-Limited Growth of Microbial Colonies
- Hayden Tronnolone
- , Alexander Tam
- & Benjamin J. Binder
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| Open AccessBeyond dose: Pulsed antibiotic treatment schedules can maintain individual benefit while reducing resistance
- Christopher M. Baker
- , Matthew J. Ferrari
- & Katriona Shea
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