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| Open AccessMetabolomic analysis indicated changes in triacylglycerols’ levels as a result of training in Whippet dogs
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| Open AccessSL-scan identifies synthetic lethal interactions in cancer using metabolic networks
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| Open AccessPichia pastoris growth—coupled heme biosynthesis analysis using metabolic modelling
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| Open AccessThe effective deficiency of biochemical networks
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| Open AccessIntegrating glycolysis, citric acid cycle, pentose phosphate pathway, and fatty acid beta-oxidation into a single computational model
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| Open AccessProteomic analysis of the effect of hemin in breast cancer
- G. P. Coló
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| Open AccessIntegrated multi-omics analysis of Alzheimer’s disease shows molecular signatures associated with disease progression and potential therapeutic targets
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| Open AccessMachine learning and metabolic modelling assisted implementation of a novel process analytical technology in cell and gene therapy manufacturing
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| Open AccessMulti-omics network model reveals key genes associated with p-coumaric acid stress response in an industrial yeast strain
- F. E. Ciamponi
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| Open AccessAHR is a master regulator of diverse pathways in endogenous metabolism
- Jeffry C. Granados
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| Open AccessRapid-SL identifies synthetic lethal sets with an arbitrary cardinality
- Mehdi Dehghan Manshadi
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| Open AccessIn vivo transomic analyses of glucose-responsive metabolism in skeletal muscle reveal core differences between the healthy and obese states
- Toshiya Kokaji
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| Open AccessStochastic model of ERK-mediated progesterone receptor translocation, clustering and transcriptional activity
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| Open AccessQueueing theory model of pentose phosphate pathway
- Sylwester M. Kloska
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| Open AccessScalable reaction network modeling with automatic validation of consistency in Event-B
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| Open AccessDiverse classes of constraints enable broader applicability of a linear programming-based dynamic metabolic modeling framework
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| Open AccessA structural property for reduction of biochemical networks
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| Open AccessEvolution of opposing regulatory interactions underlies the emergence of eukaryotic cell cycle checkpoints
- Rosa D. Hernansaiz-Ballesteros
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| Open AccessTranscriptome integrated metabolic modeling of carbon assimilation underlying storage root development in cassava
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| Open AccessWavelength of a Turing-type mechanism regulates the morphogenesis of meshwork patterns
- Shan Guo
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| Open AccessBenchmarking of numerical integration methods for ODE models of biological systems
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| Open AccessInfluence of energy deficiency on the subcellular processes of Substantia Nigra Pars Compacta cell for understanding Parkinsonian neurodegeneration
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- & V. Srinivasa Chakravarthy
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| Open AccessPseudomonas aeruginosa reverse diauxie is a multidimensional, optimized, resource utilization strategy
- S. Lee McGill
- , Yeni Yung
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| Open AccessBacterial diversity and functional analysis of severe early childhood caries and recurrence in India
- Balakrishnan Kalpana
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| Open AccessSkipGNN: predicting molecular interactions with skip-graph networks
- Kexin Huang
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| Open AccessA network-based approach to deciphering a dynamic microbiome’s response to a subtle perturbation
- Grace Tzun-Wen Shaw
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| Open AccessMolecular simulations unravel the molecular principles that mediate selective permeability of carboxysome shell protein
- Matthew Faulkner
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| Open AccessA model of the PI cycle reveals the regulating roles of lipid-binding proteins and pitfalls of using mosaic biological data
- Francoise Mazet
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| Open AccessA biochemical network modeling of a whole-cell
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| Open AccessGenome-scale reconstruction of Paenarthrobacter aurescens TC1 metabolic model towards the study of atrazine bioremediation
- Shany Ofaim
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| Open AccessAsymmetry between Activators and Deactivators in Functional Protein Networks
- Ammar Tareen
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| Open AccessComponent response rate variation underlies the stability of highly complex finite systems
- A. Bradley Duthie
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| Open AccessiMM1865: A New Reconstruction of Mouse Genome-Scale Metabolic Model
- Saeideh Khodaee
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| Open AccessProvitamin D3 modulation through prebiotics supplementation: simulation based assessment
- Sucheta Gokhale
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| Open AccessBioinformatic analysis of peripheral blood RNA-sequencing sensitively detects the cause of late graft loss following overt hyperglycemia in pig-to-nonhuman primate islet xenotransplantation
- Hyun-Je Kim
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| Open AccessFlySilico: Flux balance modeling of Drosophila larval growth and resource allocation
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| Open AccessNew opportunities for designing effective small interfering RNAs
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| Open AccessKinetic Control of Parallel versus Antiparallel Amyloid Aggregation via Shape of the Growing Aggregate
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| Open AccessReconstruction of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveal functional lncRNAs in Cerebral Infarction
- Jun-Bo Zou
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| Open AccessGenome-scale metabolic model of the rat liver predicts effects of diet restriction
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| Open AccessRat liver folate metabolism can provide an independent functioning of associated metabolic pathways
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| Open AccessQuercetin conjugated with superparamagnetic iron oxide nanoparticles improves learning and memory better than free quercetin via interacting with proteins involved in LTP
- Elnaz Amanzadeh
- , Abolghasem Esmaeili
- & Siamak Beheshti
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| Open AccessModelling changes in glutathione homeostasis as a function of quinone redox metabolism
- Ross A. Kelly
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| Open AccessThe 5-formyltetrahydrofolate futile cycle reduces pathway stochasticity in an extended hybrid-stochastic model of folate-mediated one-carbon metabolism
- Karla Misselbeck
- , Luca Marchetti
- & Martha S. Field
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| Open AccessThe Reaction of Dimerization by Itself Reduces the Noise Intensity of the Protein Monomer
- Feng-You Liu
- , Shih-Chiang Lo
- & Che-Chi Shu
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| Open AccessUnderstanding carbon utilization routes between high and low starch-producing cultivars of cassava through Flux Balance Analysis
- Porntip Chiewchankaset
- , Wanatsanan Siriwat
- & Treenut Saithong
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| Open AccessQuantifying dynamic mechanisms of auto-regulation in Escherichia coli with synthetic promoter in response to varying external phosphate levels
- Cansu Uluşeker
- , Jesús Torres-Bacete
- & Ozan Kahramanoğulları
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| Open AccessErythrocytes as bioreactors to decrease excess ammonium concentration in blood
- Eugeniy S. Protasov
- , Daria V. Borsakova
- & Elena I. Sinauridze