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Research | 2 December 2020 | Open
Chemotherapy induces dynamic immune responses in breast cancers that impact treatment outcome
- Yeon Hee Park
- , Samir Lal
- , Jeong Eon Lee
- , Yoon-La Choi
- , Ji Wen
- , Sripad Ram
- , Ying Ding
- , Soo-Hyeon Lee
- , Eric Powell
- , Se Kyung Lee
- , Jong Han Yu
- , Keith A. Ching
- , Jae-Yong Nam
- , Seok Won Kim
- , Seok Jin Nam
- , Ji-Yeon Kim
- , Soo Youn Cho
- , Seri Park
- , Jinho Kim
- , Soohyn Hwang
- , Yu Jin Kim
- , Vinicius Bonato
- , Diane Fernandez
- , Shibing Deng
- , Shuoguo Wang
- , Hyuntae Shin
- , Eun-Suk Kang
- , Woong-Yang Park
- , Paul A. Rejto
- , Jadwiga Bienkowska
- & Zhengyan Kan
Nature Communications 11 , 1–14

Rights & permissionsfor article Chemotherapy induces dynamic immune responses in breast cancers that impact treatment outcome . Opens in a new window.
Research | 26 June 2020 | Open
Building a PubMed knowledge graph
- Jian Xu
- , Sunkyu Kim
- , Min Song
- , Minbyul Jeong
- , Donghyeon Kim
- , Jaewoo Kang
- , Justin F. Rousseau
- , Xin Li
- , Weijia Xu
- , Vetle I. Torvik
- , Yi Bu
- , Chongyan Chen
- , Islam Akef Ebeid
- , Daifeng Li
- & Ying Ding
Scientific Data 7 , 1–15

Rights & permissionsfor article Building a PubMed knowledge graph . Opens in a new window.
Research | 2 November 2018
Laser capture microdissection–targeted mass spectrometry: a method for multiplexed protein quantification within individual layers of the cerebral cortex
- Matthew L. MacDonald
- , Daley Favo
- , Megan Garver
- , Zhe Sun
- , Dominique Arion
- , Ying Ding
- , Nathan Yates
- , Robert A. Sweet
- & David A. Lewis
Neuropsychopharmacology 44 , 743–748

Rights & permissionsfor article Laser capture microdissection–targeted mass spectrometry: a method for multiplexed protein quantification within individual layers of the cerebral cortex . Opens in a new window.
Research | 19 June 2018
Asiatic acid enhances intratumor delivery and the antitumor effect of pegylated liposomal doxorubicin by reducing tumor-stroma collagen
- Luo Fang
- , Si-si Kong
- , Li-ke Zhong
- , Can-ming Wang
- , Yu-jia Liu
- , Hai-ying Ding
- , Jiao Sun
- , Yi-wen Zhang
- , Fan-zhu Li
- & Ping Huang
Acta Pharmacologica Sinica 40 , 539–545

Rights & permissionsfor article Asiatic acid enhances intratumor delivery and the antitumor effect of pegylated liposomal doxorubicin by reducing tumor-stroma collagen . Opens in a new window.
Research | 14 August 2017 | Open
The study of electronic nematicity in an overdoped (Bi, Pb)₂Sr₂CuO_6+δ superconductor using scanning tunneling spectroscopy
- Yuan Zheng
- , Ying Fei
- , Kunliang Bu
- , Wenhao Zhang
- , Ying Ding
- , Xingjiang Zhou
- , Jennifer E. Hoffman
- & Yi Yin
Scientific Reports 7 , 1–8

Rights & permissionsfor article The study of electronic nematicity in an overdoped (Bi, Pb)2Sr2CuO6+δ superconductor using scanning tunneling spectroscopy . Opens in a new window.
Research | 23 March 2017 | Open
DNA methylation evidence against the accelerated aging hypothesis of schizophrenia
- Brandon C. McKinney
- , Huang Lin
- , Ying Ding
- , David A. Lewis
- & Robert A. Sweet
npj Schizophrenia 3 , 1–3

Rights & permissionsfor article DNA methylation evidence against the accelerated aging hypothesis of schizophrenia . Opens in a new window.
Correspondence | 30 December 2015
OASIS: web-based platform for exploring cancer multi-omics data
- Julio Fernandez-Banet
- , Anthony Esposito
- , Scott Coffin
- , Istvan Boerner Horvath
- , Heather Estrella
- , Sabine Schefzick
- , Shibing Deng
- , Kai Wang
- , Keith AChing
- , Ying Ding
- , Peter Roberts
- , Paul A Rejto
- & Zhengyan Kan
Nature Methods 13 , 9–10

Rights & permissionsfor article OASIS: web-based platform for exploring cancer multi-omics data . Opens in a new window.
Amendments and Corrections | 8 December 2016 | Open
Correction: Corrigendum: Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues
- Erica L. Scheller
- , Casey R. Doucette
- , Brian S. Learman
- , William P. Cawthorn
- , Shaima Khandaker
- , Benjamin Schell
- , Brent Wu
- , Shi-Ying Ding
- , Miriam A. Bredella
- , Pouneh K. Fazeli
- , Basma Khoury
- , Karl J. Jepsen
- , Paul F. Pilch
- , Anne Klibanski
- , Clifford J. Rosen
- & Ormond A. MacDougald
Nature Communications 7 , 1–2

Rights & permissionsfor article Correction: Corrigendum: Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues . Opens in a new window.
Research | 1 May 2005
Pioglitazone can ameliorate insulin resistance in low-dose streptozotocin and high sucrose-fat diet induced obese rats
- Shi-ying Ding
- , Zhu-fang Shen
- , Yue-teng Chen
- , Su-juan Sun
- , Quan Liu
- & Ming-zhi Xie
Acta Pharmacologica Sinica 26 , 575–580

Rights & permissionsfor article Pioglitazone can ameliorate insulin resistance in low-dose streptozotocin and high sucrose-fat diet induced obese rats . Opens in a new window.
Research | 14 February 2020
Deep-learning-based prediction of late age-related macular degeneration progression
- Qi Yan
- , Daniel E. Weeks
- , Hongyi Xin
- , Anand Swaroop
- , Emily Y. Chew
- , Heng Huang
- , Ying Ding
- & Wei Chen
Nature Machine Intelligence 2 , 141–150

Rights & permissionsfor article Deep-learning-based prediction of late age-related macular degeneration progression . Opens in a new window.
Research | 13 September 2019 | Open
The higher prevalence of extended spectrum beta-lactamases among Escherichia coli ST131 in Southeast Asia is driven by expansion of a single, locally prevalent subclone
Scientific Reports 9 , 1–14

Rights & permissionsfor article The higher prevalence of extended spectrum beta-lactamases among Escherichia coli ST131 in Southeast Asia is driven by expansion of a single, locally prevalent subclone . Opens in a new window.
Research | 9 April 2019 | Open
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies
- Zhe Sun
- , Li Chen
- , Hongyi Xin
- , Yale Jiang
- , Qianhui Huang
- , Anthony R. Cillo
- , Tracy Tabib
- , Jay K. Kolls
- , Tullia C. Bruno
- , Robert Lafyatis
- , Dario A. A. Vignali
- , Kong Chen
- , Ying Ding
- , Ming Hu
- & Wei Chen
Nature Communications 10 , 1–10

Rights & permissionsfor article A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies . Opens in a new window.
Reviews | 12 October 2018
Regulatory T cells in the treatment of disease
- Amir Sharabi
- , Maria G. Tsokos
- , Ying Ding
- , Thomas R. Malek
- , David Klatzmann
- & George C. Tsokos
Nature Reviews Drug Discovery 17 , 823–844

Rights & permissionsfor article Regulatory T cells in the treatment of disease . Opens in a new window.
Research | 30 April 2018 | Open
Multi-omics profiling of younger Asian breast cancers reveals distinctive molecular signatures
- Zhengyan Kan
- , Ying Ding
- , Jinho Kim
- , Hae Hyun Jung
- , Woosung Chung
- , Samir Lal
- , Soonweng Cho
- , Julio Fernandez-Banet
- , Se Kyung Lee
- , Seok Won Kim
- , Jeong Eon Lee
- , Yoon-La Choi
- , Shibing Deng
- , Ji-Yeon Kim
- , Jin Seok Ahn
- , Ying Sha
- , Xinmeng Jasmine Mu
- , Jae-Yong Nam
- , Young-Hyuck Im
- , Soohyeon Lee
- , Woong-Yang Park
- , Seok Jin Nam
- & Yeon Hee Park
Nature Communications 9 , 1–13

Rights & permissionsfor article Multi-omics profiling of younger Asian breast cancers reveals distinctive molecular signatures . Opens in a new window.
Research | 16 February 2018 | Open
Bone marrow lympho-myeloid malfunction in obesity requires precursor cell-autonomous TLR4
- Ailing Liu
- , Minhui Chen
- , Rashmi Kumar
- , Maja Stefanovic-Racic
- , Robert M. O’Doherty
- , Ying Ding
- , Willi Jahnen-Dechent
- & Lisa Borghesi
Nature Communications 9 , 1–11

Rights & permissionsfor article Bone marrow lympho-myeloid malfunction in obesity requires precursor cell-autonomous TLR4 . Opens in a new window.
Research | 23 May 2017 | Open
Electronic evidence of temperature-induced Lifshitz transition and topological nature in ZrTe₅
- Yan Zhang
- , Chenlu Wang
- , Li Yu
- , Guodong Liu
- , Aiji Liang
- , Jianwei Huang
- , Simin Nie
- , Xuan Sun
- , Yuxiao Zhang
- , Bing Shen
- , Jing Liu
- , Hongming Weng
- , Lingxiao Zhao
- , Genfu Chen
- , Xiaowen Jia
- , Cheng Hu
- , Ying Ding
- , Wenjuan Zhao
- , Qiang Gao
- , Cong Li
- , Shaolong He
- , Lin Zhao
- , Fengfeng Zhang
- , Shenjin Zhang
- , Feng Yang
- , Zhimin Wang
- , Qinjun Peng
- , Xi Dai
- , Zhong Fang
- , Zuyan Xu
- , Chuangtian Chen
- & X. J. Zhou
Nature Communications 8 , 1–9

Rights & permissionsfor article Electronic evidence of temperature-induced Lifshitz transition and topological nature in ZrTe5 . Opens in a new window.
Research | 8 January 2018 | Open
Identification of a novel gene regulating amygdala-mediated fear extinction
- Ozge Gunduz-Cinar
- , Emma Brockway
- , Lauren Lederle
- , Troy Wilcox
- , Lindsay R. Halladay
- , Ying Ding
- , Hyunjung Oh
- , Erica F. Busch
- , Katie Kaugars
- , Shaun Flynn
- , Aaron Limoges
- , Olena Bukalo
- , Kathryn P. MacPherson
- , Sophie Masneuf
- , Courtney Pinard
- , Etienne Sibille
- , Elissa J. Chesler
- & Andrew Holmes
Molecular Psychiatry 24 , 601–612

Rights & permissionsfor article Identification of a novel gene regulating amygdala-mediated fear extinction . Opens in a new window.
Research | 7 July 2017 | Open
Cancer risk factors among people living with HIV/AIDS in China: a systematic review and meta-analysis
- Zi-Yi Jin
- , Xing Liu
- , Ying-Ying Ding
- , Zuo-Feng Zhang
- & Na He
Scientific Reports 7 , 1–15

Rights & permissionsfor article Cancer risk factors among people living with HIV/AIDS in China: a systematic review and meta-analysis . Opens in a new window.
Research | 16 March 2015 | Open
Combination of Electroacupuncture and Grafted Mesenchymal Stem Cells Overexpressing TrkC Improves Remyelination and Function in Demyelinated Spinal Cord of Rats
- Ying Ding
- , Rong-Yi Zhang
- , Bing He
- , Zhou Liu
- , Ke Zhang
- , Jing-Wen Ruan
- , Eng-Ang Ling
- , Jin-Lang Wu
- & Yuan-Shan Zeng
Scientific Reports 5 , 1–14

Rights & permissionsfor article Combination of Electroacupuncture and Grafted Mesenchymal Stem Cells Overexpressing TrkC Improves Remyelination and Function in Demyelinated Spinal Cord of Rats . Opens in a new window.
Research | 6 August 2015 | Open
Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues
- Erica L. Scheller
- , Casey R. Doucette
- , Brian S. Learman
- , William P. Cawthorn
- , Shaima Khandaker
- , Benjamin Schell
- , Brent Wu
- , Shi-Ying Ding
- , Miriam A. Bredella
- , Pouneh K. Fazeli
- , Basma Khoury
- , Karl J. Jepsen
- , Paul F. Pilch
- , Anne Klibanski
- , Clifford J. Rosen
- & Ormond A. MacDougald
Nature Communications 6 , 1–15

Rights & permissionsfor article Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues . Opens in a new window.
Research | 1 September 2014
Testing the Predictive Value of Peripheral Gene Expression for Nonremission Following Citalopram Treatment for Major Depression
- Jean-Philippe Guilloux
- , Sabrina Bassi
- , Ying Ding
- , Chris Walsh
- , Gustavo Turecki
- , George Tseng
- , Jill M Cyranowski
- & Etienne Sibille
Neuropsychopharmacology 40 , 701–710

Rights & permissionsfor article Testing the Predictive Value of Peripheral Gene Expression for Nonremission Following Citalopram Treatment for Major Depression . Opens in a new window.
Research | 20 August 2013 | Open
Discovery of a potent benzoxaborole-based anti-pneumococcal agent targeting leucyl-tRNA synthetase
- Qing-Hua Hu
- , Ru-Juan Liu
- , Zhi-Peng Fang
- , Jiong Zhang
- , Ying-Ying Ding
- , Min Tan
- , Meng Wang
- , Wei Pan
- , Hu-Chen Zhou
- & En-Duo Wang
Scientific Reports 3 , 1–8

Rights & permissionsfor article Discovery of a potent benzoxaborole-based anti-pneumococcal agent targeting leucyl-tRNA synthetase . Opens in a new window.
Research | 4 November 2014 | Open
In vitro molecular evolution yields an NEIBM with a potential novel IgG binding property
- Peipei Qi
- , Ying-Ying Ding
- , Ting He
- , Tong Yang
- , Qiuli Chen
- , Jiaojiao Feng
- , Jinhong Wang
- , Mingmei Cao
- , Xiangyu Li
- , Heng Peng
- , Huaimin Zhu
- , Jie Cao
- & Wei Pan
Scientific Reports 4 , 1–9

Rights & permissionsfor article In vitro molecular evolution yields an NEIBM with a potential novel IgG binding property . Opens in a new window.

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Chemotherapy induces dynamic immune responses in breast cancers that impact treatment outcome

Building a PubMed knowledge graph

Laser capture microdissection–targeted mass spectrometry: a method for multiplexed protein quantification within individual layers of the cerebral cortex

Asiatic acid enhances intratumor delivery and the antitumor effect of pegylated liposomal doxorubicin by reducing tumor-stroma collagen

The study of electronic nematicity in an overdoped (Bi, Pb)₂Sr₂CuO_6+δ superconductor using scanning tunneling spectroscopy

DNA methylation evidence against the accelerated aging hypothesis of schizophrenia

OASIS: web-based platform for exploring cancer multi-omics data

Correction: Corrigendum: Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues

Pioglitazone can ameliorate insulin resistance in low-dose streptozotocin and high sucrose-fat diet induced obese rats

Deep-learning-based prediction of late age-related macular degeneration progression

The higher prevalence of extended spectrum beta-lactamases among Escherichia coli ST131 in Southeast Asia is driven by expansion of a single, locally prevalent subclone

A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies

Regulatory T cells in the treatment of disease

Multi-omics profiling of younger Asian breast cancers reveals distinctive molecular signatures

Bone marrow lympho-myeloid malfunction in obesity requires precursor cell-autonomous TLR4

Electronic evidence of temperature-induced Lifshitz transition and topological nature in ZrTe₅

Identification of a novel gene regulating amygdala-mediated fear extinction

Cancer risk factors among people living with HIV/AIDS in China: a systematic review and meta-analysis

Combination of Electroacupuncture and Grafted Mesenchymal Stem Cells Overexpressing TrkC Improves Remyelination and Function in Demyelinated Spinal Cord of Rats

Region-specific variation in the properties of skeletal adipocytes reveals regulated and constitutive marrow adipose tissues

Testing the Predictive Value of Peripheral Gene Expression for Nonremission Following Citalopram Treatment for Major Depression

Discovery of a potent benzoxaborole-based anti-pneumococcal agent targeting leucyl-tRNA synthetase

In vitro molecular evolution yields an NEIBM with a potential novel IgG binding property

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