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Research | | Open
Genome biology of the paleotetraploid perennial biomass crop Miscanthus
- Therese Mitros
- , Adam M. Session
- , Brandon T. James
- , Guohong Albert Wu
- , Mohammad B. Belaffif
- , Lindsay V. Clark
- , Shengqiang Shu
- , Hongxu Dong
- , Adam Barling
- , Jessica R. Holmes
- , Jessica E. Mattick
- , Jessen V. Bredeson
- , Siyao Liu
- , Kerrie Farrar
- , Katarzyna Głowacka
- , Stanisław Jeżowski
- , Kerrie Barry
- , Won Byoung Chae
- , John A. Juvik
- , Justin Gifford
- , Adebosola Oladeinde
- , Toshihiko Yamada
- , Jane Grimwood
- , Nicholas H. Putnam
- , Jose De Vega
- , Susanne Barth
- , Manfred Klaas
- , Trevor Hodkinson
- , Laigeng Li
- , Xiaoli Jin
- , Junhua Peng
- , Chang Yeon Yu
- , Kweon Heo
- , Ji Hye Yoo
- , Bimal Kumar Ghimire
- , Iain S. Donnison
- , Jeremy Schmutz
- , Matthew E. Hudson
- , Erik J. Sacks
- , Stephen P. Moose
- , Kankshita Swaminathan
- & Daniel S. Rokhsar
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Amendments and Corrections |
Author Correction: Discovery of stimulation-responsive immune enhancers with CRISPR activation
- Dimitre R. Simeonov
- , Benjamin G. Gowen
- , Mandy Boontanrart
- , Theodore L. Roth
- , John D. Gagnon
- , Maxwell R. Mumbach
- , Ansuman T. Satpathy
- , Youjin Lee
- , Nicolas L. Bray
- , Alice Y. Chan
- , Dmytro S. Lituiev
- , Michelle L. Nguyen
- , Rachel E. Gate
- , Meena Subramaniam
- , Zhongmei Li
- , Jonathan M. Woo
- , Therese Mitros
- , Graham J. Ray
- , Gemma L. Curie
- , Nicki Naddaf
- , Julia S. Chu
- , Hong Ma
- , Eric Boyer
- , Frederic Van Gool
- , Hailiang Huang
- , Ruize Liu
- , Victoria R. Tobin
- , Kathrin Schumann
- , Mark J. Daly
- , Kyle K. Farh
- , K. Mark Ansel
- , Chun J. Ye
- , William J. Greenleaf
- , Mark S. Anderson
- , Jeffrey A. Bluestone
- , Howard Y. Chang
- , Jacob E. Corn
- & Alexander Marson
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Amendments and Corrections |
Erratum: Genome sequence of the palaeopolyploid soybean
- Jeremy Schmutz
- , Steven B. Cannon
- , Jessica Schlueter
- , Jianxin Ma
- , Therese Mitros
- , William Nelson
- , David L. Hyten
- , Qijian Song
- , Jay J. Thelen
- , Jianlin Cheng
- , Dong Xu
- , Uffe Hellsten
- , Gregory D. May
- , Yeisoo Yu
- , Tetsuya Sakurai
- , Taishi Umezawa
- , Madan K. Bhattacharyya
- , Devinder Sandhu
- , Babu Valliyodan
- , Erika Lindquist
- , Myron Peto
- , David Grant
- , Shengqiang Shu
- , David Goodstein
- , Kerrie Barry
- , Montona Futrell-Griggs
- , Brian Abernathy
- , Jianchang Du
- , Zhixi Tian
- , Liucun Zhu
- , Navdeep Gill
- , Trupti Joshi
- , Marc Libault
- , Anand Sethuraman
- , Xue-Cheng Zhang
- , Kazuo Shinozaki
- , Henry T. Nguyen
- , Rod A. Wing
- , Perry Cregan
- , James Specht
- , Jane Grimwood
- , Dan Rokhsar
- , Gary Stacey
- , Randy C. Shoemaker
- & Scott A. Jackson
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Research |
Discovery of stimulation-responsive immune enhancers with CRISPR activation
- Dimitre R. Simeonov
- , Benjamin G. Gowen
- , Mandy Boontanrart
- , Theodore L. Roth
- , John D. Gagnon
- , Maxwell R. Mumbach
- , Ansuman T. Satpathy
- , Youjin Lee
- , Nicolas L. Bray
- , Alice Y. Chan
- , Dmytro S. Lituiev
- , Michelle L. Nguyen
- , Rachel E. Gate
- , Meena Subramaniam
- , Zhongmei Li
- , Jonathan M. Woo
- , Therese Mitros
- , Graham J. Ray
- , Gemma L. Curie
- , Nicki Naddaf
- , Julia S. Chu
- , Hong Ma
- , Eric Boyer
- , Frederic Van Gool
- , Hailiang Huang
- , Ruize Liu
- , Victoria R. Tobin
- , Kathrin Schumann
- , Mark J. Daly
- , Kyle K. Farh
- , K. Mark Ansel
- , Chun J. Ye
- , William J. Greenleaf
- , Mark S. Anderson
- , Jeffrey A. Bluestone
- , Howard Y. Chang
- , Jacob E. Corn
- & Alexander Marson
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Research | | Open
Genome evolution in the allotetraploid frog Xenopus laevis
- Adam M. Session
- , Yoshinobu Uno
- , Taejoon Kwon
- , Jarrod A. Chapman
- , Atsushi Toyoda
- , Shuji Takahashi
- , Akimasa Fukui
- , Akira Hikosaka
- , Atsushi Suzuki
- , Mariko Kondo
- , Simon J. van Heeringen
- , Ian Quigley
- , Sven Heinz
- , Hajime Ogino
- , Haruki Ochi
- , Uffe Hellsten
- , Jessica B. Lyons
- , Oleg Simakov
- , Nicholas Putnam
- , Jonathan Stites
- , Yoko Kuroki
- , Toshiaki Tanaka
- , Tatsuo Michiue
- , Minoru Watanabe
- , Ozren Bogdanovic
- , Ryan Lister
- , Georgios Georgiou
- , Sarita S. Paranjpe
- , Ila van Kruijsbergen
- , Shengquiang Shu
- , Joseph Carlson
- , Tsutomu Kinoshita
- , Yuko Ohta
- , Shuuji Mawaribuchi
- , Jerry Jenkins
- , Jane Grimwood
- , Jeremy Schmutz
- , Therese Mitros
- , Sahar V. Mozaffari
- , Yutaka Suzuki
- , Yoshikazu Haramoto
- , Takamasa S. Yamamoto
- , Chiyo Takagi
- , Rebecca Heald
- , Kelly Miller
- , Christian Haudenschild
- , Jacob Kitzman
- , Takuya Nakayama
- , Yumi Izutsu
- , Jacques Robert
- , Joshua Fortriede
- , Kevin Burns
- , Vaneet Lotay
- , Kamran Karimi
- , Yuuri Yasuoka
- , Darwin S. Dichmann
- , Martin F. Flajnik
- , Douglas W. Houston
- , Jay Shendure
- , Louis DuPasquier
- , Peter D. Vize
- , Aaron M. Zorn
- , Michihiko Ito
- , Edward M. Marcotte
- , John B. Wallingford
- , Yuzuru Ito
- , Makoto Asashima
- , Naoto Ueno
- , Yoichi Matsuda
- , Gert Jan C. Veenstra
- , Asao Fujiyama
- , Richard M. Harland
- , Masanori Taira
- & Daniel S. Rokhsar
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Research | | Open
Hemichordate genomes and deuterostome origins
- Oleg Simakov
- , Takeshi Kawashima
- , Ferdinand Marlétaz
- , Jerry Jenkins
- , Ryo Koyanagi
- , Therese Mitros
- , Kanako Hisata
- , Jessen Bredeson
- , Eiichi Shoguchi
- , Fuki Gyoja
- , Jia-Xing Yue
- , Yi-Chih Chen
- , Robert M. Freeman
- , Akane Sasaki
- , Tomoe Hikosaka-Katayama
- , Atsuko Sato
- , Manabu Fujie
- , Kenneth W. Baughman
- , Judith Levine
- , Paul Gonzalez
- , Christopher Cameron
- , Jens H. Fritzenwanker
- , Ariel M. Pani
- , Hiroki Goto
- , Miyuki Kanda
- , Nana Arakaki
- , Shinichi Yamasaki
- , Jiaxin Qu
- , Andrew Cree
- , Yan Ding
- , Huyen H. Dinh
- , Shannon Dugan
- , Michael Holder
- , Shalini N. Jhangiani
- , Christie L. Kovar
- , Sandra L. Lee
- , Lora R. Lewis
- , Donna Morton
- , Lynne V. Nazareth
- , Geoffrey Okwuonu
- , Jireh Santibanez
- , Rui Chen
- , Stephen Richards
- , Donna M. Muzny
- , Andrew Gillis
- , Leonid Peshkin
- , Michael Wu
- , Tom Humphreys
- , Yi-Hsien Su
- , Nicholas H. Putnam
- , Jeremy Schmutz
- , Asao Fujiyama
- , Jr-Kai Yu
- , Kunifumi Tagawa
- , Kim C. Worley
- , Richard A. Gibbs
- , Marc W. Kirschner
- , Christopher J. Lowe
- , Noriyuki Satoh
- , Daniel S. Rokhsar
- & John Gerhart
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Research | | Open
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Research | | Open
The Sorghum bicolor genome and the diversification of grasses
- Andrew H. Paterson
- , John E. Bowers
- , Rémy Bruggmann
- , Inna Dubchak
- , Jane Grimwood
- , Heidrun Gundlach
- , Georg Haberer
- , Uffe Hellsten
- , Therese Mitros
- , Alexander Poliakov
- , Jeremy Schmutz
- , Manuel Spannagl
- , Haibao Tang
- , Xiyin Wang
- , Thomas Wicker
- , Arvind K. Bharti
- , Jarrod Chapman
- , F. Alex Feltus
- , Udo Gowik
- , Igor V. Grigoriev
- , Eric Lyons
- , Christopher A. Maher
- , Mihaela Martis
- , Apurva Narechania
- , Robert P. Otillar
- , Bryan W. Penning
- , Asaf A. Salamov
- , Yu Wang
- , Lifang Zhang
- , Nicholas C. Carpita
- , Michael Freeling
- , Alan R. Gingle
- , C. Thomas Hash
- , Beat Keller
- , Patricia Klein
- , Stephen Kresovich
- , Maureen C. McCann
- , Ray Ming
- , Daniel G. Peterson
- , Mehboob-ur-Rahman
- , Doreen Ware
- , Peter Westhoff
- , Klaus F. X. Mayer
- , Joachim Messing
- & Daniel S. Rokhsar
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Research | | Open
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
- Ignazio Verde
- , Albert G Abbott
- , Simone Scalabrin
- , Sook Jung
- , Shengqiang Shu
- , Fabio Marroni
- , Tatyana Zhebentyayeva
- , Maria Teresa Dettori
- , Jane Grimwood
- , Federica Cattonaro
- , Andrea Zuccolo
- , Laura Rossini
- , Jerry Jenkins
- , Elisa Vendramin
- , Lee A Meisel
- , Veronique Decroocq
- , Bryon Sosinski
- , Simon Prochnik
- , Therese Mitros
- , Alberto Policriti
- , Guido Cipriani
- , Luca Dondini
- , Stephen Ficklin
- , David M Goodstein
- , Pengfei Xuan
- , Cristian Del Fabbro
- , Valeria Aramini
- , Dario Copetti
- , Susana Gonzalez
- , David S Horner
- , Rachele Falchi
- , Susan Lucas
- , Erica Mica
- , Jonathan Maldonado
- , Barbara Lazzari
- , Douglas Bielenberg
- , Raul Pirona
- , Mara Miculan
- , Abdelali Barakat
- , Raffaele Testolin
- , Alessandra Stella
- , Stefano Tartarini
- , Pietro Tonutti
- , Pere Arús
- , Ariel Orellana
- , Christina Wells
- , Dorrie Main
- , Giannina Vizzotto
- , Herman Silva
- , Francesco Salamini
- , Jeremy Schmutz
- , Michele Morgante
- & Daniel S Rokhsar
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Research | | Open
Genome sequence of the palaeopolyploid soybean
- Jeremy Schmutz
- , Steven B. Cannon
- , Jessica Schlueter
- , Jianxin Ma
- , Therese Mitros
- , William Nelson
- , David L. Hyten
- , Qijian Song
- , Jay J. Thelen
- , Jianlin Cheng
- , Dong Xu
- , Uffe Hellsten
- , Gregory D. May
- , Yeisoo Yu
- , Tetsuya Sakurai
- , Taishi Umezawa
- , Madan K. Bhattacharyya
- , Devinder Sandhu
- , Babu Valliyodan
- , Erika Lindquist
- , Myron Peto
- , David Grant
- , Shengqiang Shu
- , David Goodstein
- , Kerrie Barry
- , Montona Futrell-Griggs
- , Brian Abernathy
- , Jianchang Du
- , Zhixi Tian
- , Liucun Zhu
- , Navdeep Gill
- , Trupti Joshi
- , Marc Libault
- , Anand Sethuraman
- , Xue-Cheng Zhang
- , Kazuo Shinozaki
- , Henry T. Nguyen
- , Rod A. Wing
- , Perry Cregan
- , James Specht
- , Jane Grimwood
- , Dan Rokhsar
- , Gary Stacey
- , Randy C. Shoemaker
- & Scott A. Jackson
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Research | | Open
The Trichoplax genome and the nature of placozoans
- Mansi Srivastava
- , Emina Begovic
- , Jarrod Chapman
- , Nicholas H. Putnam
- , Uffe Hellsten
- , Takeshi Kawashima
- , Alan Kuo
- , Therese Mitros
- , Asaf Salamov
- , Meredith L. Carpenter
- , Ana Y. Signorovitch
- , Maria A. Moreno
- , Kai Kamm
- , Jane Grimwood
- , Jeremy Schmutz
- , Harris Shapiro
- , Igor V. Grigoriev
- , Leo W. Buss
- , Bernd Schierwater
- , Stephen L. Dellaporta
- & Daniel S. Rokhsar
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Research | | Open
Reference genome sequence of the model plant Setaria
- Jeffrey L Bennetzen
- , Jeremy Schmutz
- , Hao Wang
- , Ryan Percifield
- , Jennifer Hawkins
- , Ana C Pontaroli
- , Matt Estep
- , Liang Feng
- , Justin N Vaughn
- , Jane Grimwood
- , Jerry Jenkins
- , Kerrie Barry
- , Erika Lindquist
- , Uffe Hellsten
- , Shweta Deshpande
- , Xuewen Wang
- , Xiaomei Wu
- , Therese Mitros
- , Jimmy Triplett
- , Xiaohan Yang
- , Chu-Yu Ye
- , Margarita Mauro-Herrera
- , Lin Wang
- , Pinghua Li
- , Manoj Sharma
- , Rita Sharma
- , Pamela C Ronald
- , Olivier Panaud
- , Elizabeth A Kellogg
- , Thomas P Brutnell
- , Andrew N Doust
- , Gerald A Tuskan
- , Daniel Rokhsar
- & Katrien M Devos
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Research |
Genome sequencing and analysis of the model grass Brachypodium distachyon
- John P. Vogel
- , David F. Garvin
- , Todd C. Mockler
- , Jeremy Schmutz
- , Dan Rokhsar
- , Michael W. Bevan
- , Kerrie Barry
- , Susan Lucas
- , Miranda Harmon-Smith
- , Kathleen Lail
- , Hope Tice
- , Jeremy Schmutz (Leader)
- , Jane Grimwood
- , Neil McKenzie
- , Michael W. Bevan
- , Naxin Huo
- , Yong Q. Gu
- , Gerard R. Lazo
- , Olin D. Anderson
- , John P. Vogel (Leader)
- , Frank M. You
- , Ming-Cheng Luo
- , Jan Dvorak
- , Jonathan Wright
- , Melanie Febrer
- , Michael W. Bevan
- , Dominika Idziak
- , Robert Hasterok
- , David F. Garvin
- , Erika Lindquist
- , Mei Wang
- , Samuel E. Fox
- , Henry D. Priest
- , Sergei A. Filichkin
- , Scott A. Givan
- , Douglas W. Bryant
- , Jeff H. Chang
- , Todd C. Mockler (Leader)
- , Haiyan Wu
- , Wei Wu
- , An-Ping Hsia
- , Patrick S. Schnable
- , Anantharaman Kalyanaraman
- , Brad Barbazuk
- , Todd P. Michael
- , Samuel P. Hazen
- , Jennifer N. Bragg
- , Debbie Laudencia-Chingcuanco
- , John P. Vogel
- , David F. Garvin
- , Yiqun Weng
- , Neil McKenzie
- , Michael W. Bevan
- , Georg Haberer
- , Manuel Spannagl
- , Klaus Mayer (Leader)
- , Thomas Rattei
- , Therese Mitros
- , Dan Rokhsar
- , Sang-Jik Lee
- , Jocelyn K. C. Rose
- , Lukas A. Mueller
- , Thomas L. York
- , Thomas Wicker (Leader)
- , Jan P. Buchmann
- , Jaakko Tanskanen
- , Alan H. Schulman (Leader)
- , Heidrun Gundlach
- , Jonathan Wright
- , Michael Bevan
- , Antonio Costa de Oliveira
- , Luciano da C. Maia
- , William Belknap
- , Yong Q. Gu
- , Ning Jiang
- , Jinsheng Lai
- , Liucun Zhu
- , Jianxin Ma
- , Cheng Sun
- , Ellen Pritham
- , Jerome Salse (Leader)
- , Florent Murat
- , Michael Abrouk
- , Georg Haberer
- , Manuel Spannagl
- , Klaus Mayer
- , Remy Bruggmann
- , Joachim Messing
- , Frank M. You
- , Ming-Cheng Luo
- , Jan Dvorak
- , Noah Fahlgren
- , Samuel E. Fox
- , Christopher M. Sullivan
- , Todd C. Mockler
- , James C. Carrington
- , Elisabeth J. Chapman
- , Greg D. May
- , Jixian Zhai
- , Matthias Ganssmann
- , Sai Guna Ranjan Gurazada
- , Marcelo German
- , Blake C. Meyers
- , Pamela J. Green (Leader)
- , Jennifer N. Bragg
- , Ludmila Tyler
- , Jiajie Wu
- , Yong Q. Gu
- , Gerard R. Lazo
- , Debbie Laudencia-Chingcuanco
- , James Thomson
- , John P. Vogel (Leader)
- , Samuel P. Hazen
- , Shan Chen
- , Henrik V. Scheller
- , Jesper Harholt
- , Peter Ulvskov
- , Samuel E. Fox
- , Sergei A. Filichkin
- , Noah Fahlgren
- , Jeffrey A. Kimbrel
- , Jeff H. Chang
- , Christopher M. Sullivan
- , Elisabeth J. Chapman
- , James C. Carrington
- , Todd C. Mockler
- , Laura E. Bartley
- , Peijian Cao
- , Ki-Hong Jung
- , Manoj K Sharma
- , Miguel Vega-Sanchez
- , Pamela Ronald
- , Christopher D. Dardick
- , Stefanie De Bodt
- , Wim Verelst
- , Dirk Inzé
- , Maren Heese
- , Arp Schnittger
- , Xiaohan Yang
- , Udaya C. Kalluri
- , Gerald A. Tuskan
- , Zhihua Hua
- , Richard D. Vierstra
- , David F. Garvin
- , Yu Cui
- , Shuhong Ouyang
- , Qixin Sun
- , Zhiyong Liu
- , Alper Yilmaz
- , Erich Grotewold
- , Richard Sibout
- , Kian Hematy
- , Gregory Mouille
- , Herman Höfte
- , Todd Michael
- , Jérome Pelloux
- , Devin O’Connor
- , James Schnable
- , Scott Rowe
- , Frank Harmon
- , Cynthia L. Cass
- , John C. Sedbrook
- , Mary E. Byrne
- , Sean Walsh
- , Janet Higgins
- , Michael Bevan
- , Pinghua Li
- , Thomas Brutnell
- , Turgay Unver
- , Hikmet Budak
- , Harry Belcram
- , Mathieu Charles
- , Boulos Chalhoub
- & Ivan Baxter
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Research | | Open
The Amphimedon queenslandica genome and the evolution of animal complexity
- Mansi Srivastava
- , Oleg Simakov
- , Jarrod Chapman
- , Bryony Fahey
- , Marie E. A. Gauthier
- , Therese Mitros
- , Gemma S. Richards
- , Cecilia Conaco
- , Michael Dacre
- , Uffe Hellsten
- , Claire Larroux
- , Nicholas H. Putnam
- , Mario Stanke
- , Maja Adamska
- , Aaron Darling
- , Sandie M. Degnan
- , Todd H. Oakley
- , David C. Plachetzki
- , Yufeng Zhai
- , Marcin Adamski
- , Andrew Calcino
- , Scott F. Cummins
- , David M. Goodstein
- , Christina Harris
- , Daniel J. Jackson
- , Sally P. Leys
- , Shengqiang Shu
- , Ben J. Woodcroft
- , Michel Vervoort
- , Kenneth S. Kosik
- , Gerard Manning
- , Bernard M. Degnan
- & Daniel S. Rokhsar
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Research | | Open
The dynamic genome of Hydra
- Jarrod A. Chapman
- , Ewen F. Kirkness
- , Oleg Simakov
- , Steven E. Hampson
- , Therese Mitros
- , Thomas Weinmaier
- , Thomas Rattei
- , Prakash G. Balasubramanian
- , Jon Borman
- , Dana Busam
- , Kathryn Disbennett
- , Cynthia Pfannkoch
- , Nadezhda Sumin
- , Granger G. Sutton
- , Lakshmi Devi Viswanathan
- , Brian Walenz
- , David M. Goodstein
- , Uffe Hellsten
- , Takeshi Kawashima
- , Simon E. Prochnik
- , Nicholas H. Putnam
- , Shengquiang Shu
- , Bruce Blumberg
- , Catherine E. Dana
- , Lydia Gee
- , Dennis F. Kibler
- , Lee Law
- , Dirk Lindgens
- , Daniel E. Martinez
- , Jisong Peng
- , Philip A. Wigge
- , Bianca Bertulat
- , Corina Guder
- , Yukio Nakamura
- , Suat Ozbek
- , Hiroshi Watanabe
- , Konstantin Khalturin
- , Georg Hemmrich
- , André Franke
- , René Augustin
- , Sebastian Fraune
- , Eisuke Hayakawa
- , Shiho Hayakawa
- , Mamiko Hirose
- , Jung Shan Hwang
- , Kazuho Ikeo
- , Chiemi Nishimiya-Fujisawa
- , Atshushi Ogura
- , Toshio Takahashi
- , Patrick R. H. Steinmetz
- , Xiaoming Zhang
- , Roland Aufschnaiter
- , Marie-Kristin Eder
- , Anne-Kathrin Gorny
- , Willi Salvenmoser
- , Alysha M. Heimberg
- , Benjamin M. Wheeler
- , Kevin J. Peterson
- , Angelika Böttger
- , Patrick Tischler
- , Alexander Wolf
- , Takashi Gojobori
- , Karin A. Remington
- , Robert L. Strausberg
- , J. Craig Venter
- , Ulrich Technau
- , Bert Hobmayer
- , Thomas C. G. Bosch
- , Thomas W. Holstein
- , Toshitaka Fujisawa
- , Hans R. Bode
- , Charles N. David
- , Daniel S. Rokhsar
- & Robert E. Steele
