Reviews & Analysis

Quantitative text analysis is a range of computational methods to analyse text data statistically and mathematically. In this Primer, Kristoffer Nielbo et al. introduce the methods, principles and applications of the quantitative text analysis across disciplines.

Deep tissues can be imaged with high resolution and greater contrast by performing fluorescence imaging in the second near-infrared (NIR-II) window. This Primer summarizes how NIR-II fluorescence imaging can be used in animal models, exploring commonly used fluorophores and implementation approaches across a range of scientific and clinical applications.

Analysing single-molecule fluorescence resonance energy transfer (smFRET) enables an unprecedented view of the dynamics and kinetics of biomolecular conformational changes and interactions. In this Primer, Ha et al. discuss technological advances that have led to smFRET and how the method can be adapted to address various research questions in structural and molecular biology.

Biocarbons are carbonaceous solids derived from renewable and sustainable feedstocks through thermochemical conversion at high temperatures. In this Primer, Mohanty et al. discuss feedstock selection, pyrolysis techniques and post-modification strategies, as well as waste reduction and the economic impact of biocarbons.

Graph neural networks are a class of deep learning methods that can model physical systems, generate new molecules and identify drug candidates. This Primer introduces graph neural networks and explores how they are applied across the life and physical sciences.

Structures of surfaces and thin films can be investigated by performing X-ray diffraction under grazing incidence conditions. This Primer explores how grazing incidence X-ray diffraction is used to obtain crystallographic information, including in situ characterization, data collection, analysis and visualization, across a range of applications.

Artificial molecular pumps are synthetic machines capable of performing complex tasks on a molecular scale. In this Primer, Zhang et al. discuss the design features and underlying fundamental physical principles of artificial molecular pumps.

Fresh water can be produced from saline water using pressure-driven membrane desalination. This Primer explores how reverse osmosis and nanofiltration are used as energy-efficient desalination methods, with a focus on membrane development, characterization and performance modelling.

Brillouin microscopy is a non-contact method used for mechanical probing of cells and tissues. In this Primer, Kabakova et al. provide a comprehensive overview of the methods and applications of Brillouin microscopy.

The adaptive immune receptor repertoire (AIRR) drives adaptive immune responses, which could determine disease outcomes, infectious disease and cancer. Mhanna, Bashour et al. outline the approaches and challenges in AIRR analysis, as well as future developments towards predicting adaptive immune responses.

Waveguide-enhanced Raman spectroscopy (WERS) exploits the electromagnetic enhancement that can be achieved at the surface of suitably designed waveguides to enhance Raman intensity. In this Primer, Ettabib et al. describe methods for data collection and quantitative analysis of waveguide-enhanced Raman spectra.

Ultra-fine nanofibres can be produced by manipulating polymer solutions, melts or suspensions with a strong electric field. This electrospinning process enables the properties of nanofibres to be tuned. In this Primer, electrospinning technology is explored, including the underlying principles, experimental techniques, characterization and applications in biomedicine, wearables and environmental purification.

Chemogenetics is a technique for modulating engineered proteins using small molecules. In this Primer, Kang et al. describe the key aspects of designing receptors and small molecules and their use in neuroscience applications.

In vivo NMR spectroscopy of whole, living multicellular organisms involves maintaining live organisms within an NMR spectrometer and analysing their metabolic profiles in real time. In this Primer, Lysak and colleagues describe experimental approaches for in vivo NMR, including solution-state and magic-angle spinning NMR.

Arrays of element antennas in radio interferometry enable the study of celestial objects with angular resolutions comparable with, or surpassing, optical imaging at wavelengths thousands of times shorter. In this Primer, Asaki et al. describe aperture synthesis, the basic instrumental components and data calibration.

Muography takes advantage of the high penetrating power and relativistic nature of cosmic-ray muons for imagery; positioning, navigation, timing; and secured communications. This Primer provides an overview of muography techniques, describing how they are used in Earth and planetary sciences, computer science and social science.

Using multiple liquid chromatography columns can improve separations and enable complex samples to be analysed. This Primer introduces comprehensive 2D chromatography, including instrument setups for different applications.

Two-dimensional electronic spectroscopy (2DES) is an optical technique that can investigate ultrafast dynamics with femtosecond time resolution. This Primer describes the underlying physical principles behind 2DES and explains how it can be applied to study different dynamic photophysical processes.

Studying materials at high temperature and pressure provides information about phase transitions, with different X-ray probes to characterize material properties. This Primer describes how static and dynamic compression at synchrotrons and X-ray free-electron lasers can be used to reach high temperature, high pressure states and probe matter under extreme conditions.

Electrochemical surface-enhanced Raman spectroscopy measurements involve the collection of greatly enhanced Raman spectra at the electrified interface of nanostructured metal surfaces. In this Primer, Brosseau et al. describe the mechanisms of electrochemical surface-enhanced Raman spectroscopy and important experimental details as well as data preprocessing, interpretation and analysis.