Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Clinical Research
  • Published:

APOA5 genetic variants are markers for classic hyperlipoproteinemia phenotypes and hypertriglyceridemia

Abstract

Background Several known candidate gene variants are useful markers for diagnosing hyperlipoproteinemia. In an attempt to identify other useful variants, we evaluated the association of two common APOA5 single-nucleotide polymorphisms across the range of classic hyperlipoproteinemia phenotypes.

Methods We assessed plasma lipoprotein profiles and APOA5 S19W and −1131T>C genotypes in 678 adults from a single tertiary referral lipid clinic and in 373 normolipidemic controls matched for age and sex, all of European ancestry.

Results We observed significant stepwise relationships between APOA5 minor allele carrier frequencies and plasma triglyceride quartiles. The odds ratios for hyperlipoproteinemia types 2B, 3, 4 and 5 in APOA5 S19W carriers were 3.11 (95% CI 1.63–5.95), 4.76 (2.25–10.1), 2.89 (1.17–7.18) and 6.16 (3.66–10.3), respectively. For APOA5 −1131T>C carriers, the odds ratios for these hyperlipoproteinemia subtypes were 2.23 (95% CI 1.21–4.08), 3.18 (1.55–6.52), 3.95 (1.85–8.45) and 4.24 (2.64–6.81), respectively. The overall odds ratio for the presence of either allele in lipid clinic patients was 2.58 (95% CI 1.89–3.52).

Conclusions A high proportion of patients with four classic hyperlipoproteinemia phenotypes are carriers of either the APOA5 S19W or −1131T>C variant or both. These two variants are robust genetic biomarkers of a range of clinical hyperlipoproteinemia phenotypes linked by hypertriglyceridemia.

Key Points

  • Hyperlipoproteinemia types 2B, 3, 4 and 5 feature elevated plasma triglyceride concentration as part of their definition

  • We found that APOA5 variants S19W and −1131T>C are frequently present in and are strongly associated with hyperlipoproteinemia 2B, 3, 4 and 5 and also with hypertriglyceridemia in lipid clinic patients

  • These two APOA5 variants are robust genetic biomarkers of a range of complex hyperlipoproteinemia phenotypes, which had been considered distinct and disparate but which share hypertriglyceridemia as a defining feature

  • These strong genetic associations might help predict susceptibility to hypertriglyceridemia or identify interindividual differences in response to interventions to lower plasma triglyceride

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Frequency of carriers of APOA5 variants according to quartile of plasma triglycerides.
Figure 2: Forest plot of odds ratios for patients with APOA5 S19W, −1131T>C or either for classic primary triglyceride-containing hyperlipoproteinemia phenotypes.

Similar content being viewed by others

References

  1. Wilson PW and Grundy SM (2003) The metabolic syndrome: a practical guide to origins and treatment: Part II. Circulation 108: 1537–1540

    Article  Google Scholar 

  2. Sarwar N et al. (2007) Triglycerides and the risk of coronary heart disease: 10,158 incident cases among 262,525 participants in 29 Western prospective studies. Circulation 115: 450–458

    Article  CAS  Google Scholar 

  3. Durrington P (2003) Dyslipidaemia. Lancet 362: 717–731

    Article  CAS  Google Scholar 

  4. Yuan G et al. (2007) Hypertriglyceridemia: its etiology, effects and treatment. CMAJ 176: 1113–1120

    Article  Google Scholar 

  5. MacLean DR et al. (1999) Plasma lipids and lipoprotein reference values, and the prevalence of dyslipoproteinemia in Canadian adults. Canadian Heart Health Surveys Research Group. Can J Cardiol 15: 434–444

    CAS  PubMed  Google Scholar 

  6. Talmud PJ and Humphries SE (2002) Gene:environment interaction in lipid metabolism and effect on coronary heart disease risk. Curr Opin Lipidol 13: 149–154

    Article  CAS  Google Scholar 

  7. Kryukov GV et al. (2007) Most rare missense alleles are deleterious in humans: implications for complex disease and association studies. Am J Hum Genet 80: 727–739

    Article  CAS  Google Scholar 

  8. Yuan G et al. (2006) Heterozygous familial hypercholesterolemia: an underrecognized cause of early cardiovascular disease. CMAJ 174: 1124–1129

    Article  Google Scholar 

  9. Walden CC and Hegele RA (1994) Apolipoprotein E in hyperlipidemia. Ann Intern Med 120: 1026–1036

    Article  CAS  Google Scholar 

  10. Pennacchio LA et al. (2001) An apolipoprotein influencing triglycerides in humans and mice revealed by comparative sequencing. Science 294: 169–173

    Article  CAS  Google Scholar 

  11. Calandra S et al. (2006) APOA5 and triglyceride metabolism, lesson from human APOA5 deficiency. Curr Opin Lipidol 17: 122–127

    Article  CAS  Google Scholar 

  12. Talmud PJ (2007) Rare APOA5 mutations—clinical consequences, metabolic and functional effects: an ENID review. Atherosclerosis 194: 287–292

    Article  CAS  Google Scholar 

  13. Pennacchio LA et al. (2002) Two independent apolipoprotein A5 haplotypes influence human plasma triglyceride levels. Hum Mol Genet 11: 3031–3038

    Article  CAS  Google Scholar 

  14. Talmud PJ et al. (2002) Relative contribution of variation within the APOC3/A4/A5 gene cluster in determining plasma triglycerides. Hum Mol Genet 11: 3039–3046

    Article  CAS  Google Scholar 

  15. Talmud PJ et al. (2005) Determination of the functionality of common APOA5 polymorphisms. J Biol Chem 280: 28215–28220

    Article  CAS  Google Scholar 

  16. Anand SS et al. (2000) Differences in risk factors, atherosclerosis, and cardiovascular disease between ethnic groups in Canada: the Study of Health Assessment and Risk in Ethnic groups (SHARE). Lancet 356: 279–284

    Article  CAS  Google Scholar 

  17. Hegele RA et al. (2003) Elevated serum C-reactive protein and free fatty acids among nondiabetic carriers of missense mutations in the gene encoding lamin A/C (LMNA) with partial lipodystrophy. Arterioscler Thromb Vasc Biol 23: 111–116

    Article  CAS  Google Scholar 

  18. Wang J et al. (2005) Multiplex ligation-dependent probe amplification of LDLR enhances molecular diagnosis of familial hypercholesterolemia. J Lipid Res 46: 366–372

    Article  CAS  Google Scholar 

  19. Wang J et al. (2001) Low density lipoprotein receptor (LDLR) gene mutations in Canadian subjects with familial hypercholesterolemia, but not of French descent. Hum Mutat 18: 359

    Article  CAS  Google Scholar 

  20. Eichenbaum-Voline S et al. (2004) Linkage and association between distinct variants of the APOA1/C3/A4/A5 gene cluster and familial combined hyperlipidemia. Arterioscler Thromb Vasc Biol 24: 167–174

    Article  CAS  Google Scholar 

  21. Assmann G and Schulte H (1992) Relation of high-density lipoprotein cholesterol and triglycerides to incidence of atherosclerotic coronary artery disease (the PROCAM experience). Prospective Cardiovascular Munster study. Am J Cardiol 70: 733–737

    Article  CAS  Google Scholar 

  22. Cullen P et al. (1994) Complex segregation analysis provides evidence for a major gene acting on serum triglyceride levels in 55 British families with familial combined hyperlipidemia. Arterioscler Thromb 14: 1233–1249

    Article  CAS  Google Scholar 

  23. Goldstein JL et al. (1973) Hyperlipidemia in coronary heart disease. II. Genetic analysis of lipid levels in 176 families and delineation of a new inherited disorder, combined hyperlipidemia. J Clin Invest 52: 1544–1568

    Article  CAS  Google Scholar 

  24. Evans D et al. (2005) Polymorphisms in the apolipoprotein A5 (APOA5) gene and type III hyperlipidemia. Clin Genet 68: 369–372

    Article  CAS  Google Scholar 

  25. Whitman SC et al. (1997) Uptake of type III hypertriglyceridemic VLDL by macrophages is enhanced by oxidation, especially after remnant formation. Arterioscler Thromb Vasc Biol 17: 1707–1715

    Article  CAS  Google Scholar 

  26. Altschul SF et al. (1990) Basic local alignment search tool. J Mol Biol 215: 403–410

    Article  CAS  Google Scholar 

  27. NCBI Map Viewer [http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?taxid=9606] (accessed 19 July 2008)

  28. Applied Biosystems [http://www.appliedbiosystems.com/support/software/]

  29. SAS Institute Inc [http://www.sas.com/technologies/analytics/statistics/stat/index.html]

  30. Stephens M and Donnelly P (2003) A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 73: 1162–1169

    Article  CAS  Google Scholar 

  31. Ahituv N et al. (2007) In vivo characterization of human APOA5 haplotypes. Genomics 90: 674–679

    Article  CAS  Google Scholar 

  32. Wojciechowski AP et al. (1991) Familial combined hyperlipidaemia linked to the apolipoprotein AI-CII-AIV gene cluster on chromosome 11q23-q24. Nature 349: 161–164

    Article  CAS  Google Scholar 

  33. Hopkins PN et al. (1991) Type III dyslipoproteinemia in patients heterozygous for familial hypercholesterolemia and apolipoprotein E2. Evidence for a gene-gene interaction. Arterioscler Thromb 11: 1137–1146

    Article  CAS  Google Scholar 

  34. Moennig G et al. (2000) Detection of missense mutations in the genes for lipoprotein lipase and hepatic triglyceride lipase in patients with dyslipidemia undergoing coronary angiography. Atherosclerosis 149: 395–401

    Article  CAS  Google Scholar 

  35. Zhang H et al. (1995) Patients with apoE3 deficiency (E2/2, E3/2, and E4/2) who manifest with hyperlipidemia have increased frequency of an Asn 291→Ser mutation in the human LPL gene. Arterioscler Thromb Vasc Biol 15: 1695–1703

    Article  CAS  Google Scholar 

  36. Groenewegen WA et al. (1994) Dysbetalipoproteinemia in a kindred with hypobetalipoproteinemia due to mutations in the genes for ApoB (ApoB-70.5) and ApoE (ApoE2). Arterioscler Thromb 14: 1695–1704

    Article  CAS  Google Scholar 

  37. Schaefer JR et al. (2004) Hyperlipidemia in patients with apolipoprotein E 2/2 phenotype: apolipoprotein A5 S19W mutation as a cofactor. Clin Chem 50: 2214

    Article  CAS  Google Scholar 

  38. Hubacek JA et al. (2005) Hypertriglyceridemia: interaction between APOE and APOAV variants. Clin Chem 51: 1311–1313

    Article  CAS  Google Scholar 

  39. Martín-Campos JM et al. (2006) Apolipoprotein A5 S19W may play a role in dysbetalipoproteinemia in patients with the Apo E2/E2 genotype. Clin Chem 52: 1974–1975

    Article  Google Scholar 

  40. Henneman P et al. (2007) Plasma apoAV levels are markedly elevated in severe hypertriglyceridemia and positively correlated with the APOA5 S19W polymorphism. Atherosclerosis 193: 129–134

    Article  CAS  Google Scholar 

  41. van der Vleuten GM et al. (2007) Haplotype analyses of the APOA5 gene in patients with familial combined hyperlipidemia. Biochim Biophys Acta 1772: 81–88

    Article  CAS  Google Scholar 

  42. Wang J et al. (2007) Resequencing genomic DNA of patients with severe hypertriglyceridemia (MIM 144650). Arterioscler Thromb Vasc Biol 27: 2450–2455

    Article  CAS  Google Scholar 

Download references

Acknowledgements

R Provost provided outstanding technical assistance. Supported by the Jacob J Wolfe Distinguished Medical Research Chair (RAH), the Edith Schulich Vinet Canada Research Chair (Tier I) in Human Genetics (RAH), a Career Investigator award from the Heart and Stroke Foundation of Ontario (RAH), and operating grants from the Canadian Institutes for Health Research (MOP-13430, MOP-39533, MOP-39833), the Heart and Stroke Foundation of Ontario (grants PRG-5967, NA-6059, T-6018) and the Ontario Research Fund and by Genome Canada through the Ontario Genomics Institute.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Robert A Hegele.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, J., Ban, M., Kennedy, B. et al. APOA5 genetic variants are markers for classic hyperlipoproteinemia phenotypes and hypertriglyceridemia. Nat Rev Cardiol 5, 730–737 (2008). https://doi.org/10.1038/ncpcardio1326

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/ncpcardio1326

This article is cited by

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing