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A call for ecology papers
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Inferring how animals deform improves cell tracking
Tracking cells is a time-consuming part of biological image analysis, and traditional manual annotation methods are prohibitively laborious for tracking neurons in the deforming and moving Caenorhabditis elegans brain. By leveraging machine learning to develop a ‘targeted augmentation’ method, we substantially reduced the number of labeled images required for tracking.
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Method of the Year 2021: Protein structure prediction
Protein structure prediction is our Method of the Year 2021, for the remarkable levels of accuracy achieved by deep learning-based methods in predicting the 3D structures of proteins and protein complexes, essentially solving this long-standing challenge.
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AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination
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In vitro modeling of the human dopaminergic system using spatially arranged ventral midbrain–striatum–cortex assembloids
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StayGold variants for molecular fusion and membrane-targeting applications
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Modeling fragment counts improves single-cell ATAC-seq analysis