Postdoc - heart cell atlas (f/m/d)

Helmholtz Zentrum München - German Research Center for Environmental Health (HMGU)

Neuherberg (bei München), Germany

Work group:

Institute of Computational Biology



Area of research:

Scientific / postdoctoral posts



Starting date:

01.01.2020



Contract time limit:

30.06.2022



Job description:

As German Research Center for Environmental Health, Helmholtz Zentrum München pursues the goal of developing personalized medical approaches for the prevention and therapy of major common diseases such as diabetes mellitus, allergies and lung diseases. To achieve this, it investigates the interaction of genetics, environmental factors and lifestyle.


The Institute of Computational Biology (ICB) is a globally recognized department for innovations in data analysis and modeling of biological systems, anchored at the Helmholtz Zentrum Munich and the Technical University Munich.


We recently got granted a project for the human cell atlas initiative, a global initiative for creating a reference map of all cells of the human body. The project "A spatial cell type reference atlas of the adult human heart" is funded by the Chan Zuckerberg Initiative within the call "Seed networks for the Human Cell Atlas".


At the next possible time the ICB is looking for a


Postdoc – heart cell atlas (f/m/d)
2019/0423

for the CZI funded human cell atlas project "A spatial cell type reference atlas of the adult human heart".


Your mission


You will be analyzing single cell OMICS-data from the human heart, in particular scRNA-seq, scATAC-seq and spatial transcriptomics. You will implement, develop and extend methods for analyzing single cell OMICS-data, in particular for the integration of data sets from different labs, technologies and OMICS-types.


Your qualifications


You are an independent creative thinker driven by curiosityPhD degree in bioinformatics, systems biology, computer science, mathematics, physics or equivalentBackground in statistical data analysis, ideally for (sc)RNAseq dataStrong coding skills, preferably in Python and/or RStrong interest in biological applicationsPassion for science and scientific workProficient in written and spoken EnglishExperience in international interdisciplinary research teamsExperience in computational methods development

What we offer you


A challenging and versatile field of work providing you with the freedom to follow your instinct and be creative. With the help of extensive and goal-orientated professional development measures and career-building programmes we encourage you to grow as a person. To ensure a good work/life balance we assist you with flexible working hours, in-house health management, a nursery, and an “Elder Care” concept as well as other consultation and support options.


Munich, with its numerous lakes and its vicinity to the Alps, is considered to be one of the cities with the best quality of life worldwide. With its first-class universities and research institutes it offers an intellectually stimulating environment.


Remuneration and social benefits are based on the collective wage agreement for public-sector employees at federal level (TV EntgO Bund).


The position is (initially) limited to 30 months, but under certain circumstances an extension can be arranged.

The activity involves special knowledge and experience specific to own scientific skills.

As a holder of the Total E-Quality Award, we promote equality of opportunity. To increase the share of women in management positions we very much welcome the respective applications. Qualified applicants with physical disabilities will be given preference.


Curious? If you have further questions, simply contact  Matthias Heinig on matthias.heinig@helmholtz-muenchen.de, who will be happy to be of assistance.



Please apply via recruiter’s website.

Quote Reference: 2019/0423

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