National University of Ireland Galway (NUI Galway)

NUIG 102-19, Research Assistant/Postdoctoral Researcher in Computer Science and Simulation, Insight2 SFI Project: Updating Complex Systems Models in Dynamic Environments, NUI Galway

National University of Ireland Galway (NUI Galway)

Galway, Ireland

Research Assistant/Postdoctoral Researcher in Computer Science and Simulation

 Insight2 SFI Project: Updating Complex Systems Models in Dynamic Environments

School of Computer Science and Insight Centre for Data Analytics

College of Science and Engineering

NUI Galway

Ref. NUIG 102-19

Applications are invited from suitably qualified candidates for a full-time, fixed term position as a Research Engineer with the School of Computer Science and the Insight Centre for Data Analytics at the National University of Ireland Galway.

 

This one-year position is funded by the Science Foundation Ireland, and is available from August 2018 to contract end date of July 2019.

 

Infectious disease modelling has traditionally analyzed data after events occur, to inform on possible future transmission. However, with improvements in the speed and quality of health data collection, it is now feasible to conduct real-time quantitative situational assessments and, therefore, model the likely course of an emerging epidemic. This research aims to enhance the process of predicting disease outbreaks through the development of a predictive analytics testbed informed by three components: (1) Population Synthesis, involving the generation of individual population data based on census information, and anonymised individual data; (2) Learning algorithms, which will provide a mechanism to calibrate compartmental models based on real-time data; and, (3) Compartmental SEIR models, which capture core disease transmission dynamics and contacts between population cohorts, informed by published contact tracing patterns.

 

 

Job Description:

The successful candidate will design and develop the testbed, based on system dynamics models of disease transmission, and calibrate these models using public health data sets.

 

Duties: The successful candidate will do be responsible for a range of project tasks, including:

  • Build and validate system dynamics models of infectious disease spread.
  • Implement population synthesis algorithms, in order to accurately represent individuals across spatial areas.
  • User interface design and validation with potential end-users in the public health area
  • Preparation and submission of journal articles to high-impact publication outlets.

 

Essential Requirements:

  • Ph.D. in Computer Science / Simulation or related area, or B.Sc/MSc in Computer Science with a further 18-24 months experience as a software engineer.
  • Excellent knowledge of system dynamics modelling, with knowledge of modelling infectious diseases, model calibration techniques, and generation of synthetic data.
  • Evidence of excellent programming, data analytics and modelling skills, and familiarity with languages such as R, and visualisation tools including D3 and ggplot2
  • Experience of working on real-world modelling applications, ideally in the area of public health and a knowledge of key infectious diseases models (SIR, SEIR, Compartmental).

 

 

 

 

 

 

Desirable Requirements:

  • Knowledge of public health systems
  • Experience of web-based platforms such as NodeJS
  • Data analytics and machine learning skills (e.g. dplyr, tidyr, caret,  etc).

 

 

Employment permit restrictions apply for this category of post if appointed at the level of Research Assistant.

 

Salary range: €37,223 – €48,208 per annum – Postdoctoral Researcher level

                        €22,110 – €34,612 per annum – Research Assistant level

Start date: Position is available from August 2019.

 

Continuing Professional Development/Training:

Researchers at NUI Galway are encouraged to avail of a range of training and development opportunities designed to support their personal career development plans.  

 

 

Further information on research and working at NUI Galway is available on Research at NUI Galway

 

For information on moving to Ireland please see www.euraxess.ie

 

Further information about Information Technology and Insight are available at:

 

http://www.it.nuigalway.ie

 

https://www.insight-centre.org

 

 

 

To Apply:

Applications to include a covering letter, CV, and the contact details of three referees should be sent, via e-mail (in PDF only) to jim.duggan@nuigalway.ie

 

Please put reference number NUIG-102-19  in subject line of e-mail application.

 

Closing date for receipt of applications is 5.00 pm Friday, 28th June 2019

 

All positions are recruited in line with Open, Transparent, Merit (OTM) and Competency based recruitment

 

National University of Ireland, Galway is an equal opportunities employer.

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NUIG 102-19, Research Assistant/Postdoctoral Researcher in Computer Science and Simulation, Insight2 SFI Project: Updating Complex Systems Models in Dynamic Environments, NUI Galway