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Volume 512 Issue 7515, 28 August 2014

In a study of the extent to which new patterns of neural activity can be generated through learning, Aaron Batista and colleagues examine neuronal network reorganization in Rhesus macaques learning to control a computer cursor using different patterns of activity in motor cortex. Some new neural activity patterns were more easily generated than others � corresponding to more easily learned tasks � and these could be predicted mathematically from the network topology at the beginning of the experiment. The authors speculate that the results provide a basis for a neural explanation for the balance between adaptability and persistence in action and thought. Cover: Jasiek Krzysztofiak/Nature

Editorial

  • Government science advisers are unlikely to be specialists on the subject of a crisis, but they are key to bringing together relevant experts and disseminating the information clearly and accurately.

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  • Climate models must consider how humans are responding to a warming world.

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World View

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Research Highlights

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Seven Days

  • The week in science: Botched launch for Europe’s GPS satellites; Iran’s science minister dismissed; and marmosets judged best model for MERS virus.

    Seven Days
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News

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News Feature

  • Volcanic eruptions, oil spills and bacterial outbreaks all land in the laps of government science advisers, and put them to the test.

    • Alexandra Witze
    • Lauren Morello
    • Marian Turner
    News Feature
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Comment

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Books & Arts

  • Mario Livio welcomes a lucid description of attempts to evaluate how special humans are.

    • Mario Livio
    Books & Arts
  • Barbara Kiser reviews five of the week’s best science picks.

    • Barbara Kiser
    Books & Arts
  • Paul L. McEuen relishes Margaret Atwood's acerbic tales of sex, hallucinations and death by stromatolite.

    • Paul L. McEuen
    Books & Arts
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Correspondence

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News & Views

  • The latest releases from the ENCODE and modENCODE research consortia more than double the number of data sets on functional elements in the worm, fly and human genomes. See Articles p.393, p.400 & Letters p.445, p.449, p.453

    • Felix Muerdter
    • Alexander Stark
    News & Views
  • Observations of γ-ray photons from a type Ia supernova indicate that stellar explosions of this kind get their energy from sudden thermonuclear fusion in the progenitor star. See Letter p.406

    • Robert P. Kirshner
    News & Views
  • The aryl hydrocarbon receptor elicits protection against toxic environmental molecules. New data show that the receptor also supports the immune system by recognizing bacterially encoded virulence factors. See Article p.387

    • Parag Kundu
    • Sven Pettersson
    News & Views
  • Neutrinos produced in the nuclear reaction that triggers solar-energy generation have been detected. This milestone in the search for solar neutrinos required a deep underground detector of exceptional sensitivity. See Article p.383

    • Wick Haxton
    News & Views
  • An improved design for a class of magnetometer greatly increases the sensitivity of these devices — and might be the vanguard of a new generation of hybrid sensors that combine different types of signal to increase sensitivity.

    • Jörg Wrachtrup
    • Amit Finkler
    News & Views
  • A theoretical model suggests that the cause of female-driven extra-pair mating lies in the spreading of male interests among neighbouring families, creating powerful incentives for male cooperation and concomitant benefits for females.

    • Ben C. Sheldon
    • Marc Mangel
    News & Views
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Article

  • The mammalian aryl hydrocarbon receptor (known to sense environmental pollutants) is shown to also have a role as a pattern recognition receptor in sensing bacterial virulence factors, resulting in an antibacterial response and activation of innate and natural defences.

    • Pedro Moura-Alves
    • Kellen Faé
    • Stefan H. E. Kaufmann
    Article
  • A large-scale transcriptome analysis in Drosophila melanogaster, across tissues, cell types and conditions, provides insights into global patterns and diversity of transcription initiation, splicing, polyadenylation and non-coding RNA expression.

    • James B. Brown
    • Nathan Boley
    • Susan E. Celniker
    Article Open Access
  • Chromatin immunoprecipitation followed by sequencing across multiple stages of Caenorhabditis elegans development reveals the genomic distribution of binding sites for 92 transcription factors and regulatory proteins, and integration of these and cellular-resolution expression data produce a spatiotemporally resolved metazoan transcription factor binding map allowing exploration into the properties of developmental regulatory circuits.

    • Carlos L. Araya
    • Trupti Kawli
    • Michael Snyder
    Article Open Access
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Letter

  • A new quantum imaging experiment demonstrates images made with light that does not encounter the object; one of a pair of photons created at two crystals illuminates the object but is never detected, and the other photon, which is in a joint quantum state with the first and does not interact with the object, forms an image of the object on a camera.

    • Gabriela Barreto Lemos
    • Victoria Borish
    • Anton Zeilinger
    Letter
  • Fossils of Metaspriggina, one of the earliest known and most primitive fishes, are described, with the structure of the gills shown to presage that of jawed vertebrates in many ways.

    • Simon Conway Morris
    • Jean-Bernard Caron
    Letter
  • During learning, the new patterns of neural population activity that develop are constrained by the existing network structure so that certain patterns can be generated more readily than others.

    • Patrick T. Sadtler
    • Kristin M. Quick
    • Aaron P. Batista
    Letter
  • Uniform processing and detailed annotation of human, worm and fly RNA-sequencing data reveal ancient, conserved features of the transcriptome, shared co-expression modules (many enriched in developmental genes), matched expression patterns across development and similar extent of non-canonical, non-coding transcription; furthermore, the data are used to create a single, universal model to predict gene-expression levels for all three organisms from chromatin features at the promoter.

    • Mark B. Gerstein
    • Joel Rozowsky
    • Robert Waterston
    Letter Open Access
  • A large collection of new modENCODE and ENCODE genome-wide chromatin data sets from cell lines and developmental stages in worm, fly and human are analysed; this reveals many conserved features of chromatin organization among the three organisms, as well as notable differences in the composition and locations of repressive chromatin.

    • Joshua W. K. Ho
    • Youngsook L. Jung
    • Peter J. Park
    Letter Open Access
  • A map of genome-wide binding locations of 165 human, 93 worm and 52 fly transcription-regulatory factors (almost 50% presented for the first time) from diverse cell types, developmental stages, or conditions reveals that gene-regulatory properties previously observed for individual factors may be general principles of metazoan regulation that are well preserved.

    • Alan P. Boyle
    • Carlos L. Araya
    • Michael Snyder
    Letter Open Access
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Column

  • People seeking non-academic jobs may need to try something unexpected to be noticed, says Peter Fiske.

    • Peter Fiske
    Column
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Career Brief

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Futures

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