Table 1: Fold change (logFC) of genes significantly down-regulated in both white genotypes F. vesca YW and HW4 compared to the red genotype RdV.

From: Early metabolic and transcriptional variations in fruit of natural white-fruited Fragaria vesca genotypes

Gene_IDlogFCSUM RdVSUM YWSUM HW4PredictionConfirmed function
gene00395−1.9732315151protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC101299619) 
gene01839−1.910,3303,8112,475probable cinnamyl alcohol dehydrogenase 1 (LOC101292655) 
gene04905−3.798502receptor-like protein 12 (LOC101309371) 
gene05464−7.84520uncharacterized sequence 
gene06602−1.72,566922710crocetin glucosyltransferase, chloroplastic-like (LOC101309923) 
gene07846−4.235470pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like (LOC101315323) 
gene08163−5.058300uncharacterized sequence 
gene10142−5.01,1121131572-alkenal reductase NADP(+)-dependent-like (LOC101302097) 
gene12477−6.1200012-oxophytodienoate reductase 3-like (LOC101293338) 
gene12565−4.21,996591187S-norcoclaurine synthase-like (LOC101292845) 
gene12591−9.22,341106anthocyanidin 3-O-glucosyltransferase 2 (LOC101300000)GT127
gene12759−3.43103703putative F-box/LRR-repeat protein 23 (LOC101304436) 
gene12884−4.0394495dirigent protein 1-like (LOC101292468) 
gene13009−4.376123F-box protein CPR30-like (LOC101302499) 
gene14611−2.42,517665763naringenin, 2-oxoglutarate 3-dioxygenase (LOC101300182)FHT6
gene15176−3.6715307133bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase (DFR) (LOC101293459)DFR37
gene16103−1.4771318268pyridoxal kinase (LOC101304704) 
gene16795−4.758530uncharacterized sequence 
gene17181−5.7800lysine histidine transporter-like 8 (LOC101292649) 
gene20261−8.04530TMV resistance protein N-like (LOC101312392) 
gene21346−2.21,209729319probable chalcone--flavonone isomerase 3 (LOC101305307)CHI10
gene23269−2.72212774uncharacterized sequence 
gene24010−4.654710uncharacterized sequence 
gene24179−1.7648202160aspartic proteinase Asp1 (LOC101314219) 
gene25083−4.9331812-oxophytodienoate reductase 2-like (LOC101297812) 
gene26826−3.21,309407246polyketide synthase 1 (LOC101298456)FvCHS2-235
gene27955−4.96961receptor-like serine/threonine-protein kinase SD1-8 (LOC101306554) 
gene30678−4.11881791transmembrane protein 184 homolog DDB_G0279555-like (LOC105350765) 
gene31672−7.2678171glutathione S-transferase F11-like (LOC101294111) 
gene32347−3.31,161253205leucoanthocyanidin dioxygenase (LOC101308284)ANS6
gene32421−3.06429288protein P21-like (LOC101300343) 
gene32435−2.555119892short-chain dehydrogenase/reductase 2b-like (LOC101296098) 
gene33838−1.429118857AMP deaminase-like (LOC101301583)