Table 1: The most significantly differentially expressed genes in All atherosclerotic plaques versus atherosclerosis free control arteries (LITA), (FC ≥ ± 15 and FDR < 0.05) and the corresponding FC and p-values from comparisons between atherosclerotic plaques from different arterial beds (abdominal aorta, carotid, femoral) compared to LITA.

From: Differentially expressed genes and canonical pathway expression in human atherosclerotic plaques – Tampere Vascular Study

Gene symbolACCESSIONAll vs. LITAAorta vs. LITACarotid vs. LITAFemoralis vs LITA
FCP-valueFCp-valueFCp-valueFCp-value
SPP1NM_001040058.1121.91.82*10−13104.32.73*10−8135.71.19*10−15105.43.16*10−14
SPP1NM_000582.2109.11.82*10−1390.92.73*10−8113.91.19*10−1599.93.16*10−14
MMP12NM_002426.288.91.82*10−1372.42.73*10−8124.91.19*10−1568.33.16*10−14
MMP9NM_004994.276.11.82*10−1332.02.73*10−898.81.19*10−1576.93.16*10−14
CIDECNM_022094.2−61.22.91*10−11−17.02.00*10−3−90.41.19*10−15−50.13.71*10−10
KIAA1881XM_001130790.1−60.19.97*10−12−17.72.73*10−8−80.11.19*10−15−50.96.60*10−11
LOC642113XM_936253.153.35.44*10−12135.02.91*10−836.18.72*10−1238.73.71*10−10
MMP7NM_002423.352.52.21*10−1317.83.93*10−891.81.19*10−1536.23.16*10−14
LOC647450XM_936518.152.45.12*10−12153.52.91*10−847.68.72*10−1232.52.94*10−10
LOC652493XM_941953.152.13.55*10−12127.72.91*10−845.24.17*10−1232.11.82*10−10
LOC652694XM_942302.147.23.14*10−12129.42.14*10−846.02.48*10−1222.21.43*10−10
MMP12NM_002426.247.17.00*10−1372.42.73*10−863.21.19*10−1525.51.43*10−10
APODNM_001647.2−39.71.24*10−10−1.43.76*10−2−68.11.19*10−15−43.93.16*10−14
APOC1NM_001645.336.22.21*10−1330.39.94*10−1153.22.38*10−1532.86.33*10−14
PLA2G7NM_005084.229.92.21*10−1312.55.97*10−1043.61.19*10−1528.03.16*10−14
MMP7NM_002423.328.32.21*10−1317.81.99*10−1054.61.19*10−1521.23.16*10−14
KIAA1199NM_018689.125.51.82*10−1331.04.97*10−1126.51.19*10−1519.53.16*10−14
CIDEANM_001279.2−24.56.22*10−11−17.95.42*10−5−30.48.13*10−13−23.44.46*10−8
ADAMDEC1NM_014479.224.21.82*10−1326.14.97*10−1128.51.19*10−1515.03.16*10−14
SCARA5NM_173833.4−22.86.16*10−13−3.31.08*10−6−27.01.19*10−15−23.83.16*10−14
ACP5NM_001611.222.64.78*10−137.43.40*10−831.41.19*10−1532.03.16*10−14
IGLL1NM_020070.220.07.83*10−1238.11.99*10−1019.21.39*10−1116.01.70*10−9
LOC652102XM_941434.119.05.23*10−1158.94.97*10−1116.62.53*10−1011.97.40*10−8
APOENM_000041.217.67.45*10−1315.81.34*10−727.72.38*10−1516.43.16*10−14
PLINNM_002666.3−17.35.87*10−11−12.94.66*10−5−19.01.44*10−12−18.51.70*10−9
ACTA1NM_001100.3−16.37.40*10−11−9.37.02*10−7−19.62.26*10−14−9.23.86*10−7
RGS1NM_002922.315.86.57*10−1323.94.97*10−1112.08.13*10−1312.63.80*10−13
OLR1NM_002543.315.83.70*10−1320.65.97*10−1015.45.35*10−1417.11.27*10−13
MYOCNM_000261.1−15.23.05*10−13−11.12.24*10−9−17.81.19*10−15−10.96.33*10−14
  1. aAbbreviations: FC = fold changes (FC); FDR = False discovery rate; LITA = left internal thoracic artery.