Figure 1 | Scientific Reports

Figure 1

From: Resequencing of the common marmoset genome improves genome assemblies and gene-coding sequence analysis

Figure 1

An example of an improved region.

(a) The region “chr4: 69196273–69307838” in the MGSAC draft genome consisted of 6 contigs, which includes 5 gaps, 1 with a length > 10 Kbp. (b) SSPACE generated a scaffold using MP reads, in which the region corresponding to the large gap was filled with the contig ACFV01184668.1 (gray), which was part of the non-chromosomal scaffolds in the MGSAC draft genome. (c) The remaining gaps were filled by GapCloser using Illumina short sequence reads. Finally, the genome was updated by mapping the gap-filled scaffolds.

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