Table 1 Overview of normal tissues and tumor cell lines used to generate the draft map and spectral libraries.

From: A tissue-based draft map of the murine MHC class I immunopeptidome

Sample type Amount (g) MS instrument Nbr. MS injections
Spleen Tissue 1.91 Lumos + TTOF 26
Liver Tissue 15.98 Lumos + TTOF 22
Intestine Tissue 12.42 Lumos + TTOF 27
Lung Tissue 7.71 Lumos + TTOF 20
Thymus Tissue 1.57 Lumos + TTOF 15
Kidney Tissue 6.33 Lumos + TTOF 22
Colon Tissue 5.53 Lumos + TTOF 22
Uterus Tissue 1.06 Lumos + TTOF 17
Bone marrow Tissue NA Lumos 4
Skin Tissue 3.84 Lumos 4
Testis Tissue 2.94 Lumos + TTOF 13
Adrenal gland Tissue 0.64 Lumos 4
Bladder Tissue 0.29 Lumos + TTOF 12
Heart Tissue 0.91 Lumos + TTOF 18
Brain Tissue 9.4 Lumos + TTOF 24
Ovary Tissue 0.36 Lumos + TTOF 12
Stomach Tissue 1.51 Lumos + TTOF 10
Pancreas Tissue 0.13 Lumos 4
Spinal cord Tissue NA Lumos + TTOF 4
Lymphoma EL4 cell line 109 cells Lumos + TTOF 10
Lewis lung carcinoma LLC1 cell line 109 cells Lumos 14
Malignant glioma GL261 cell line 109 cells Lumos 10
Melanoma B16F10 cell line 109 cells Lumos 20
Total     334
  1. The Orbitrap Fusion Lumos (Lumos) and the Triple TOF 5600 (TTOF) were used to generate the data in both HCD/CID and CID mode, respectively. The full sample annotation is provided in (Annotation Table, Data Citation 1). All data files are available at (Data Citation 1) and (Data Citation 2). NA indicates that the amount of tissue was not available.