Abstract
Voltage-gated sodium channels (Nav channels) support the genesis and brisk spatial propagation of action potentials in the heart. Disruption of NaV1.5 inactivation results in a small persistent sodium influx known as late sodium current (INa,L), which has emerged as a common pathogenic mechanism in both congenital and acquired cardiac arrhythmogenic syndromes. In the present study, using low-noise multichannel recordings in heterologous systems, LQTS3 patient-derived induced pluripotent stem cell cardiomyocytes and mouse ventricular myocytes, we demonstrate that the intracellular fibroblast growth factor homologous factors (FHF1–4) tune pathogenic INa,L in an isoform-specific manner. This scheme suggests a complex orchestration of INa,L in cardiomyocytes that may contribute to variable disease expressivity of NaV1.5 channelopathies. We further leverage these observations to engineer a peptide inhibitor of INa,L with a higher efficacy compared with a well-established small-molecule inhibitor. Overall, these findings lend insights into molecular mechanisms underlying FHF regulation of INa,L in pathophysiology and outline potential therapeutic avenues.
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Data availability
All data are available in the main text or the supplementary materials. Source data are available for this paper.
Code availability
Customized MATLAB scripts used for multichannel analysis are available at Github: https://github.com/manubenjohny/LateCurrent.
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Acknowledgements
We thank H. Colecraft for valuable insight into and feedback on this work. The present study is supported by funding from the National Heart, Lung, and Blood Institute, the National Institute of Neurological Disorders and Stroke and the American Heart Association (grant no. R01 NS110672 to M.B.J., Postdoctoral Fellowship no. 836413 to N.C., grant nos. R01HL160089 and R01HL140934 to S.O.M., R01 HL128743 to G.F.T. and T32 HL120826 (Andrew Marks PI) to R.M.). Research supported in the present study was performed in the Columbia CCTI Flow cytometry core, supported in part by the Office of the Director, National Institutes of Health (NIH) under award no. S10RR027050. Images were collected and analyzed in the Confocal and Specialized Microscopy Shared Resource of the Herbert Irving Comprehensive Cancer Center at Columbia University, supported by the NIH (grant no. P30 CA013696 (National Cancer Institute)). The content is solely the responsibility of the authors and does not necessarily represent the official views of the NIH.
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N.C., S.O.M. and M.B.-J. conceptualized and designed the research. N.C., S.R., J.D., A.H., R.M., D.R., L.Y., B.-X.C., J.O.O., D.S., B.C., I.E.D. and M.B.-J. performed research and acquired the data. N.C., S.R., J.D. and M.B.-J. analyzed the data. N.C., S.R., J.D., D.R., L.Y., B.-X.C., J.O.O., D.S., B.C., I.E.D., G.T., S.O.M. and M.B.-J. contributed new reagents/analytic tools. M.B.-J., G.F.T. and S.O.M. acquired funds. N.C. and M.B.-J. created the figures and wrote the original draft. All the authors revised the manuscript.
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N.C., S.O.M. and M.B.-J. (inventors) filed a provisional patent (attorney docket no. CoU1046P/CU22077; filed 14 February 2022) for application of FixR for inhibiting late sodium current. The remaining authors declare no competing interests.
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Nature Cardiovascular Research thanks Mitchell Goldfarb, Christopher Ahern and Donald Bers for their contribution to the peer review of this work.
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Extended data
Extended Data Fig. 1 shRNA suppression of FHF2 has no effect on INa,L in non-TG aMVM.
a, Epifluorescence and brightfield images of cultured aMVMs from non-TG mice transduced with FHF2 shRNA. Scale bar, 100 μm. (n = 3 mice) b, Exemplar multichannel NaV recordings from uninfected non-TG mice show minimal late channel openings. Format as in Fig. 1b. Population data are shown in Fig. 1h. c-d, Application of both FHF2 shRNA and scrambled shRNA revealed no change in INa,L openings for cultured aMVMs from non-TG mice. Population data are shown in Fig. 1h.
Extended Data Fig. 2 INa,L regulation by the FHF2-3 splice variants.
a, Schematic shows various FHF2 splice variants generated by alternate start sites. Conserved exons that encode the core domain are shown in red boxes labeled E2 to E5. b-e, Exemplar recordings of LQTS3-linked ΔKPQ mutant heterologously expressed in HEK293 cells in the presence of various FHF2 splice variants. f-i, Exemplar recordings of IQ/AA mutant in the presence of FHF2 splice variants. j, Bar graph summarizes changes in INa,L quantified as Rpersist upon co-expression of FHF splice variants. FHF2S, and FHF2VY yielded a partial reduction in INa,L for both the IQ/AA and the ΔKPQ mutant, while FHF2V and FHF2U resulted in no change. Data presented as mean ± SEM. For ΔKPQ mutant, + FHF2U, n = 10 cells (561 sweeps); + FHF2V, n = 10 cells (549 sweeps); +FHF2Y, n = 9 cells (512 sweeps); and + FHF2VY, n = 9 cells (499 sweeps). For IQ/AA mutant, + FHF2U, n = 9 cells (547 sweeps); + FHF2V, n = 10 cells (807 sweeps); + FHF2Y, n = 10 cells (564 sweeps); + FHF2VY, n = 9 cells (547 sweeps). Statistical Analysis, Kruskal-Wallis test followed by Dunn’s Multiple comparisons test, ***p < 0.001;**p = 0.026(ΔKPQ + FHF2Y) and *p = 0.039(ΔKPQ + FHF2VY), *p = 0.034(IQ/AA + FHF2S) and *p = 0.011 (IQ/AA + FHF2VY) when compared to no FHF control of each mutant channel. k, Exemplar multichannel recording from recombinant NaV1.5 wild-type in HEK293 cells shown minimal late channel openings in the presence of FHF3A. Population data is shown in Fig. 2m. l, Exemplar recordings show a partial reduction in late channel openings for NaV1.5 IQ/AA mutant channel in the presence of FHF3A. Population data are shown in Fig. 2m.
Extended Data Fig. 3 Generality of INa,L regulation by FHF1A.
a, Schematic illustrates the α-subunit of NaV1.5 channel showing missense (grey) and nonsense (red) mutations in disparate channel domains. b, Exemplar multichannel recordings of NaV1.5 F1759A in the absence (top) and presence of FHF1A (bottom). c-f. Exemplar recordings suggests that FHF1A inhibits E[1784]K, S[1904]L, Q[1909]R, and Δ1885 mutant.
Extended Data Fig. 4 Inhibition of phosphorylation-dependent INa,L by FHF1-2 isoforms.
a, Schematic shows NaV1.5 phosphorylation by PKA and CaMKII upregulates INa,L. b, FHF2S inhibits PKA-dependent INa,L of wild-type NaV1.5 (similar to the effects of FHF1A in Fig. 3d). e, FHF1B fails to inhibit PKA-dependent INa,L of wild-type NaV1.5. d, Exemplar multichannel recordings from wild-type NaV1.5 upregulated by co-expression of constitutively active CaMKII (CaMKIIT286D). e-f, Both FHF1A (panel e) and FHF2S (panel f) inhibits CaMKIIT286D-triggered INa,L of wild-type NaV1.5.
Extended Data Fig. 5 Elementary mechanisms underlying FHF1A regulation of INa,L.
a, FL distributions for NaV1.5 IFM/IQM at baseline (black line and gray shaded area; n = 231 sweeps from 3 one-channel recordings) and upon overexpression of FHF1A (red line and rose shaded area; n = 217 sweeps from 5 one-channel recordings). FL denotes the probability that the first opening occurred at time < t. FHF1A had minimal effect on the FL distribution for the IFM/IQM mutant. b, FL distributions for NaV1.5 LILA/WICW at baseline (gray shaded area; n = 176 sweeps from 3 one-channel recordings) and under overexpression of FHF1A (rose shaded area; n = 270 sweeps from 6 one-channel recordings). FHF1A decreased the pedestal value of FL for the LILA/WICW mutant suggesting that FHF1A increases closed-state inactivation. p < 0.001 by KS-test. c, Open-duration (OD) distribution for NaV1.5 IFM/IQM tallies the durations of a single sojourn to the open state. FHF1A shortens the OD distribution for the IFM/IQM mutant, hinting at potential increase in the rate constant for inactivation from the open state. For IFM/IQM, n = 7597 openings from 6 cells. For IFM/IQM + FHF1A, n = 1332 openings from 9 cells. p < 0.001 by KS-test. d, FHF1A has no effect on OD distribution of the LILA/WICW mutant. For LILA/WICW, n = 22272 openings from 8 cells. For LILA/WICW + FHF1A, n = 1361 openings from 6 cells. e, Conditional open-duration (OD) distribution for NaV1.5 ΔKPQ mutants, for single-level channel openings in the late phase, after 50 ms depolarization, (n = 12278 openings from 12 cells). FHF1A shortened the OD distribution (n = 5011 openings from 12 cells), while FHF1B evoked a minor increase in OD distribution (n = 2269 openings from 6 cells). f-k, conditional OD distributions confirms variable shortening of the OD distribution in the presence of FHF1A for E[1784]K (panel f; control, n = 9355 openings from 15 cells; +FHF1A, n = 1683 openings from 14 cells), S[1904]L (panel g; control, n = 7097 openings from 10 cells; +FHF1A, n = 10 cells and 1929 openings), Q[1909]R (panel h; control, n = 4406 openings from 13 cells; +FHF1A, n = 1658 openings from 11 cells), IQ/AA (panel i; control, n = 5345 openings from 13 cells; +FHF1A, n = 1266 openings from 13 cells; +FHF1B, n = 16360 openings from 13 cells), and Δ1810 (panel j; control, n = 1049 openings from 10 cells; +FHF1A, n = 576 openings from 9 cells), all consistent with the presence of open-state block. The Δ1885 mutant failed to show any appreciable change in OD distribution (panel k; control, n = 3955 openings from 10 cells; +FHF1A, n = 2195 openings from 9 cells). As FHF1A inhibits INa,L for this mutant, this effect likely modifies the closed state. l, Bar graph summary of mean OD calculated from OD distribution function in panels. e-k from sample sizes noted in each panel. Each bar, mean OD value. e-k, Statistical Analysis, p < 0.001 for comparisons of OD distribution absent FHF to with FHF1A for ΔKPQ, E[1784]K, S[1904]L, Q[1909]R, IQ/AA, and Δ1810 mutants by KS-test.
Extended Data Fig. 6 Relative expression profiles of FHF1-4 isoforms/splice-variants in iPSC-CMs.
a, Analysis of relative expression of FHF1-4 isoforms/splice-variants using RT-qPCR demonstrate FHF1A, FHF1B, and FHF2S as the major isoforms in healthy-donor iPSC-CMs. We observed that FHF2S expression was ~ 3-fold higher than FHF1B in the healthy-donor iPSC-CMs while FHF1A was ~ 45% lower than FHF1B. Each bar and error, mean ± SEM. n = 3 independent cultures. (see Supplementary Table 1). b, In the LQTS3 (ΔKPQ) iPSC-CMs, FHF1B is the major isoform/splice-variant with ~ 50% lower level of FHF1A and ~ 20% lower level of FHF2S. The relative prevalence of FHF1B in the LQTS3 (ΔKPQ) iPSC-CMs is consistent with the high baseline INa,L obtained in functional studies in Fig. 5. Each bar and error, mean ± SEM. n = 5 independent cultures. (see Supplementary Table 1).
Extended Data Fig. 7 Identifying a minimal FHF1A domain capable of inhibiting INa,L.
a, Sequence alignment of various FHF1A amino-terminal peptides utilized to identify a minimal effector domain. b, Schematic illustrates potential interaction between the peptides and NaV1.5 channel. c, Exemplar multichannel recordings from NaV1.5 IQ/AA mutant show increase late channel openings when co-expressed with 1-18 (panel c), 18-39 (panel d), 12-17 (panel e), or 9-32 (panel f) peptides. g, Ranolazine yields a modest inhibition of INa,L for NaV1.5 IQ/AA mutant. h-i, Both FixR (panel h) and ranolazine (panel i) inhibits INa,L for NaV1.5 S1904L mutant channel. j, Bar graph shows Rpersist for NaV1.5 S1904L mutant channel in the presence of FixR or ranolazine. Black dashed line, INa,L for NaV1.5 S1904L at baseline. Blue dashed line, INa,L for NaV1.5 S1904L co-expressed with FixR. Each bar and error, mean ± SEM. n = 10 cells (557 sweeps). Statistical Analysis, one-way ANOVA followed by Dunnet’s multiple-comparisons test ***p < 0.001. k, FixR also strongly inhibits INa,L for NaV1.5 Δ1885 mutant channel. l-m, Adenoviral expression of both GFP (panel l) and FixR (panel m) yielded no change in INa,L in iPSC-CMs derived from healthy donors (HD).
Extended Data Fig. 8 Mutations in the long-term inactivation particle preserves FHF1A regulation of INa,L.
a-b, Exemplar recordings of NaV1.5 IQ/AA mutant channel heterologously expressed in HEK293 cells in the presence of either FHF1A L9A mutant (panel a), or FHF1A R11A mutant (panel b). These conserved residues have been previously shown to be critical for long-term inactivation. c, Bar graph summarizes changes in Rpersist upon co-expression of the different FHF1A mutant variant. Each bar and error, mean ± SEM. For FHF1A L9A mutant, n = 8 cells (503 sweeps) and for FHF1A R11A mutant, n = 8 cells (494 sweeps). Statistical Analysis, Kruskal-Wallis test followed by Dunn’s multiple comparisons test: ***p < 0.001; for each mutant compared to no FHF1A.
Extended Data Fig. 9 Both FHF1A and FixR have minimal effect on peak current density and steady-state inactivation of mutant NaV1.5.
a, Exemplar current recordings for NaV1.5 IQ/AA mutant channels elicited in response to a family of voltage steps from −60 to +50 mV from a holding potential of −120 mV. b, Population data shows average peak current density (Jpeak) – voltage relationship for IQ/AA mutant. Each dot, mean ± SEM with n denoted in parenthesis. c, Steady-state inactivation curve (h∞(V) curve) elicited using step-depolarizations from a holding potential of −120 mV for IQ/AA mutant. Each dot, mean ± SEM with n denoted in parenthesis. d-f, Overexpression of FHF1A does not appreciably alter peak current density (panel e) and steady-state inactivation (panel f) compared to that measured at baseline. g-i, Overexpression of FixR does not appreciably alter peak current density (panel h) and steady-state inactivation (panel i).
Extended Data Fig. 10 Extended characterization of cell-permeable FixR.
Representative flow cytometric data shows the percentage of cellular uptake of FixR (FITC positive) into HEK293 cells and effect on cytotoxicity determined using a far red (APC) DEAD cell stain (Invitrogen). Cells are incubated with varying concentrations of FixR-cpp for 2 hours. Appreciable cellular uptake is observed between 5 and 25 μM. Minimal cell death is observed in the presence of up to 10 μM FixR-cpp. b, Additional epifluorescence and brightfield images show FixR-cpp uptake into freshly-dissociated cardiomyocytes from IQ/AAtg mice (n = 3 mice). Scale bar, 10 μm.
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Chakouri, N., Rivas, S., Roybal, D. et al. Fibroblast growth factor homologous factors serve as a molecular rheostat in tuning arrhythmogenic cardiac late sodium current. Nat Cardiovasc Res 1, 1–13 (2022). https://doi.org/10.1038/s44161-022-00060-6
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DOI: https://doi.org/10.1038/s44161-022-00060-6