Abstract
The electrostatic potential within porous materials critically influences applications like gas storage, catalysis, sensors and semiconductor technology. Precise control of this potential in covalent organic frameworks (COFs) is essential for optimizing these applications. We propose a straightforward method to achieve this by employing electric quadrupolar building blocks. Our comprehensive models accurately reproduce the electrostatic potential in 2D-COFs, requiring only a few parameters that depend solely on local electrostatic properties, independent of the COF’s lattice structure and topology. This approach has been validated across various systems, including conjugated and non-conjugated building blocks with different symmetries. We explore single-layer, few-layer, and bulk systems, achieving changes in the potential which exceed one electronvolt. Stacking configurations such as eclipsed AA, serrated AA’, and inclined stacking all exhibit the tuning effect with minor variations. Finally, we discuss the impact of these potential manipulations on applications like ion and gas uptake.
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Introduction
Covalent organic frameworks (COFs) are a class of porous materials that are highly ordered and composed of covalently linked organic molecular building blocks1,2,3,4,5. The increasing scientific interest in COFs is rooted in the great variety of structural features that enables the tunability of geometrical characteristics such as size, pore size, or its internal surface area. Moreover, physical and chemical properties are influenced by combining suitable building blocks6,7,8,9,10. The electronic properties of COFs are controlled by these building blocks and the linkages between them for which an increasingly large catalog exists5,6,11. In addition to modifying building blocks, metalated COFs12 or MOFs13 as well as doping with Li14,15,16, Na, or K17,18, lead to increased storage capacities for neutral gas molecules such as H2 or CO2. This increase was rationalized19,20,21,22 by the electrostatic field of the metal ions, which induces electric dipoles and enhances binding strengths23,24, thereby improving gas storage performance. In addition, the COF itself creates an electric (or electrostatic) potential in absence of additional metal ions, whose value inside the pores is of interest. In general, electric fields and their potential have rarely been studied so far25,26,27,28,29, primarily in the context of layer alignment, however, the fields at the entrance of a pore and inside it control the majority of electronic processes. We anticipate their strong influence on various properties closely related to ion transport30,31,32, gas storage33,34,35,36, catalysis37,38,39,40,41, excitons42,43,44, or electrical transport characteristics.
In this work, we investigate the electrostatic potential and electric fields in the pore of hexagonal and tetragonal COFs, which are generated by molecular quadrupole moments of the building blocks and are further tuned by the linkages connecting them. This allows a simple and effective understanding. Our aim is to demonstrate the nature of this potential and possibilities to predict and tune it for specific needs.
Results
Introduction of model systems
We here consider COF model systems that are experimentally accessible and that are constructed from well-known precursors, which are summarized in Fig. 1. We study a diverse set of structures, including triphenylene (TP), phthalocyanine (Pc) and fluorinated Pc derivatives with imide linkages (for TPQ− and PcQ−) or diamine linking groups (for TPQ+, PcQ+, and PcF8Q+). These molecules are frequently used in COF synthesis45,46,47. For our purpose it is highly relevant that they exhibit a large variation in their quadrupole moments (QPMs), represented by their in-plane QPM component (of the traceless QPM tensor) as indicated in Fig. 1. The sign of these QPMs is also used as superscript (either Q+ or Q−) for compound names in this work for clarity. Some of these building blocks, namely Pc and fluorinated Pcs, have been employed successfully in crystalline thin films and blends to engineer electrostatic potentials48,49. Their characteristic potential distribution in gas phase is overlaid with the structure in Fig. 1. For better illustration, the potential is evaluated at a distance of 2.5 Å above the molecular plane to avoid the strong atomic core potentials at smaller distances that would otherwise dominate the images.
For the sake of clarity, we first discuss the results of the three TP-based COFs and generalize the concept of pore potential engineering by QPMs to other structures later. In these TP-based COFs, the TP units act as vertices (nodes), which are connected by benzene rings. Figure 2 shows the structures of the COF monolayers as relaxed by density functional theory (DFT) [cf. “Methods” section]. All three materials are constrained to a hexagonal lattice and the same symmetry group P6/mmm. However, they were chosen to have different linkages between the TP units and the benzene linker, which can be realized by the different monomeric units used. The structures in Fig. 2 are overlaid with the electrostatic potential from DFT. We choose the convention that positive potential values indicate attraction of electrons while negative values represent repulsion, as compared to the vacum level (zero potential, see “Methods” section). We observe that the potential within the pore is strongly negative if TP units are linked by an imide linkage group (Fig. 2a), but strongly positive if they are linked by two amine groups (Fig. 2b). We therefore denote these structures COF-TPQ− and COF-TPQ+, respectively. The potential of COF-TPQ− closely resembles the potential of TPQ− (Fig. 1a) and, analogously, the potentials of COF-TPQ+ and TPQ+ are also similar. Therefore, the sign-flipped molecular quadrupole moment between both molecules is successfully inherited to the potential of the corresponding COFs and may therefore qualify as tuning knob in COF engineering. The third COF, denoted COF-\({{\rm{TP}}}_{{\rm{conj}}.}^{Q+}\), is chosen to be a variant of COF-TPQ+ that is derived from it by formally abstracting two hydrogen atoms per linkage and thereby introducing formal conjugation on the entire structure. As a result, the potential in the pore turns negative, seemingly at odds with the potential of the TPQ+ monomer, indicating a somewhat more involved relationship between monomer QPM and COF potential.
In order to predict the COF’s pore potential from the monomer properties, we develop a simple ab initio-based model. Indeed, a model that avoids expensive DFT calculations of bulk COFs but uses simple DFT parameters of the constituents for predicting the potential in the bulk, would be highly desirable and could be used in the COF design process or to formulate guiding principles. Towards this goal, we rationalize the potential at the center of the pore by considering the charge distribution over the framework. Given that the electrons are located at the framework structure and that the electron density is exponentially suppressed toward the center of a pore, a multipole expansion for the potential at the TP’s center-of-masses is permitted. Without actually performing the expansion, its form can easily be anticipated and the leading terms will be discussed. Since the COFs are charge neutral, there are no monopole contributions in this expansion. Also, the dipole contribution vanishes due to the inversion symmetry of the moieties (see further discussion of other scenarios at the end of this paper). Thus, the QPM is the first non-vanishing contribution in the expansion. Therefore, the minimal model for the pore potential we strive for, consists only of quadrupole moments arranged periodically in the lattice. Possible higher multipole moments in the expansion can be neglected for the model. The resulting electrostatic potential Vmodel(r) is then obtained as a sum of quadrupole fields,
where \({\hat{{\boldsymbol{Q}}}}_{{\rm{model}}}^{(k)}\) is the traceless quadrupole tensor of the k-th monomer at position r(k). The high symmetry of the COFs allows for additional simplifications. In the present case, the in-plane components \({Q}_{{\rm{xx}}}^{(k)}={Q}_{{\rm{yy}}}^{(k)}\) are equal due to symmetry and \({Q}_{{\rm{zz}}}^{(k)}=-2{Q}_{{\rm{xx}}}^{(k)}\) to ensure that the entire tensor is traceless. In addition, the off-diagonal elements are zero. This strongly simplified tensor structure occurs for all sites and essentially reduces the complexity of our model to a single parameter. For concreteness, we introduce Qmodel for the xx-component of \({\hat{{\boldsymbol{Q}}}}_{{\rm{model}}}^{(k)}\). This means that for a given lattice, this single parameter characterizes the electrostatic potential, while its value varies with the chemical structure of the COF and its vertex.
We first verify the model potential at the center of the pore by comparing Vmodel(r) with the ab initio potential from DFT calculations. For a simple and practical model, we find that it suffices to include only the quadrupole moments that are closest to the pore’s center (illustrated by blue dots in Fig. 3a) in the sum of Eq. (1), while an extension to more distant QPM centers would be straightforward. The resulting potential is evaluated at the center of the pore for various out of plane distances d. A comparison of the quadrupole model with the ab initio electrostatic potential is shown in Fig. 3b and reveals an excellent agreement for all three TP COFs over a wide range of distances. We therefore conclude that the potential inside a pore can be well described as a superposition of quadrupole fields.
The fitted values of the QPMs for the model potential are summarized in Table 1. The sign of the fitted QPM reflects the sign of the DFT potential, i.e., a positive in-plane QPM of COF-TPQ+ leads to a positive potential, whereas COF-TPQ− and COF-\({{\rm{TP}}}_{{\rm{conj}}.}^{Q+}\) show negative values for Qmodel. However, when comparing the fitted Qmodel with Qmono, i.e. the xx-component of the tensor \({\hat{{\boldsymbol{Q}}}}_{{\rm{mono}}}\) obtained from DFT for the monomers (cf. Table 1), they coincide only for COF-TPQ+ (within 5%), indicating that the current model based on the TP building blocks is not complete. In particular the differences between COF-TPQ+ and COF-\({{\rm{TP}}}_{{\rm{conj}}.}^{Q+}\) sharing the same TPQ+ unit cannot yet be captured. The choice of both these COFs for our study showcases the importance of the linkages in engineering the pore potential.
The impact of the COF linkages on the potential is traced back to the different charge densities in this region (away from the TP units). Figure 4a shows the difference between charge densities \(\Delta \rho ={\rho }_{{{\rm{TP}}}^{Q+}}-{\rho }_{{{\rm{TP}}}_{{\rm{conj}}.}^{Q+}}\) at the same geometry apart from differing H atoms. The yellow isosurface represents regions with more electrons in the non-conjugated COF, whereas the blue features indicate a higher density for the conjugated COF-\({{\rm{TP}}}_{{\rm{conj}}.}^{Q+}\). This analysis reveals that most of the change in the electronic structure occurs around the linkage, while Δρ is small at the vertices. This indicates that taking into account this effect of Δρ, i.e., considering also the linkages within the COF, should improve the model.
These differences in the charge density between the two TPQ+ COFs can be simply included when considering them as resulting from auxiliary charges δq near the linkage. We introduce these effective charges at a distance r from the TP vertices as defined in Fig. 4b (open circles). These charges replace the more complex DFT-derived charges of Fig. 4a and depend only on the linker, while r is simply defined by the closest distance to a vertex and may flexibly account for the specific COF geometry. By the same symmetry arguments, these charges δq give rise to another quadrupole tensor \(\delta {\hat{{\boldsymbol{Q}}}}^{(k)}\) for each vertex. Grouping three of them (indicated by arrows in Fig. 4b) allows choosing their center at the vertex (filled circle), independently of whether they are caused by the linker. As a result, the total quadrupole tensor is the sum of both contributions
where \({\hat{{\boldsymbol{Q}}}}_{{\rm{mono}}}^{(k)}\) are the tensors of the monomers and \(\delta {\hat{{\boldsymbol{Q}}}}^{(k)}\) are determined by auxiliary charges δq near the linkages. The latter two can be simply related by using the symmetry of TP-COFs according to
Since the involved distance r is given by the geometry of the COF, δq is the only free parameter that needs to be determined from DFT for each type of linkage. These auxiliary charges δq mostly depend on the chemical structure and the nature of the bonds in the immediate vicinity of the linkage, e.g., functional groups near the linkage. In the vast majority of COFs, this does not affect the overall charge of COF building blocks. Exceptional cases, however, are conceivable in which a stronger electron transfer between building blocks leads to their charging like in charge-transfer salts. In such cases, the model requires extensions to include these scenarios with long-ranged charge transfer. In absence of this, δq is determined for a certain linkage and could be applied to other COFs with that same linkage without further DFT calculations.
We finally use Eq. (2) (resolved for \(\delta \hat{{\boldsymbol{Q}}}\)) and fix the auxiliary charge δq. They are placed directly at the site of the linkage between TP vertex and benzene linker, i.e. in between the two nitrogens for COF-TPQ− (cf. Fig. 4b) and on the nitrogen atom for COF-TPQ+. The resulting values are compiled in Table 1. This finalizes the model for the electrostatic potential of a COF’s pore that only depends on two parameters Qmono and δq, where Qmono describes the contribution from the monomers and δq the contributions from the linkage. This means that the potential is traced back to its basic building blocks. Once the parameters for those building blocks are known, one can easily estimate the electrostatic potential for new COFs without further ab initio calculations, which is a huge simplification.
Generalization for other COFs
We first validate our model by extending our study to a family of Pc-based COFs with different symmetry, which are shown in Fig. 5 together with their electrostatic potential. The Pc monomeric building units (cf. Fig. 1) are connected via benzene and the resulting COFs exhibit four-fold symmetry47,50. As a validation test, we determine, as previously, \(\delta \hat{{\boldsymbol{Q}}}\) from these COFs and the quadrupole moments of the building blocks, thereby deducing the δq anew. All parameters are summarized in Table 2, confirming the robustness of these values with minor modifications in the Pc COFs. A graphical overview over the values of these bond parameters for the entire set of COFs is provided in Fig. 6a by plotting δq of each COF against the averaged value for the specific type of linkage. It shows a very good agreement within each set for both the imide and diamine-linked COFs, i.e., δq is characteristic for the bond linkage because these specific values vary much less between COFs with the same linkage than between the different linkages. For example, the values of δq for the imide linkage of COF-TPQ− and COF-PcQ− (−0.027 e and −0.025 e) are in good agreement. They are clearly distinguished from the diamine-linked COFs, whose average δq value for COF-TPQ+, COF-PcQ+, and COF-PcF8Q+ is much smaller (δq = 0.0035 e ± 0.01 e). This clustering of δq for the same type of linkage, is also found for the conjugated COFs COF-\({{\rm{TP}}}_{{\rm{conj}}.}^{Q+}\), COF-\({{\rm{Pc}}}_{{\rm{conj}}.}^{Q+}\) and COF-\({\rm{PcF}}{8}_{{\rm{conj}}.}^{Q+}\) with (δq = −0.13 e ± 0.03 e). The larger scatter here may be attributed to the strongly electro-negative fluorine atoms close to the site of the linkage. The relative scatter of 23% indicates a second-order effect. That is δq is, besides being dominated by the linkage, also slightly influenced by the neighboring PcF8 unit. This is also visible in the difference of the charge density (Supplementary Fig. 1). If not considered, as we do for simplicity, this scatter can be taken as an error estimate for the parameter. The minor influence on the potential, however, is of greater importance and will be shown below.
In order to verify the model’s validity for the potential of COF monolayers, Fig. 6b compares the DFT potential to Vmodel for the investigated systems at various distances d to the layer. The modeled potential is in excellent agreement with the ab initio results throughout all COFs and distances. In any case the influence of the bond linkage (represented by δq and therefore \(\delta \hat{{\boldsymbol{Q}}}\)) is strong and their consideration in the model leads to Vmodel ≅ VDFT and, particularly, to the corrected sign of all potentials.
Multilayer COFs and bulk systems
Besides single monolayers, our interest is in the tuning effect of multilayers and bulk systems as these systems dominate the COF literature. Most of the experimental COFs consist of stacked 2D layers in which the pores form large tubes51,52, and the potential inside such tubes and at its entrance is of high relevance. Owing to the additive property of electrostatic potentials, the potential inside a COF tube should be the superposition of the potentials of each layer and hence describable by our model. This is because the π-stacking only marginally changes the charge density of a single layer. To verify this, we compare the pore’s potential of the three Pc-based systems to a quadrupole field as described above and add two layers to represent a three-layer stack. The ab initio potential of the COFs is calculated with eclipsed (AA) stacking and agrees very well with the model potential as demonstrated in Supplementary Fig. 2. The obtained quadrupole moments are similar to the monolayer ones and only the dielectric screening due to adjacent layers reduces the strength of the potential, which is not the case for monolayers. Based on the superposition of QPMs when stacking multiple layers and taking the obtained model parameters including the dielectric screening, we extend our study to larger stacks and predict the potential for bulk materials.
Figure 7 shows the potential of Pc-based systems when approaching the bulk limit, for which we include up to 55 layers (20 nm) and 150 × 150 QPM centers within each x–y plane (~3.3 μm in each direction) to construct Vmodel. Each individual layer is marked by either a white or a gray stripe to provide a clearer understanding of the proportions. Comparing Fig. 7a and b for AA stacking, we observe that the potential within COF-PcQ− and COF-PcQ+ can be successfully tuned to extreme opposite values. Herein, the sign and magnitude of the potential reflects their different QPMs. It should be emphasized that the energy difference between the absolute minimum and maximum in Fig. 7 can exceed 2 eV for thicker materials. Interestingly, in both systems the potential approaches a plateau with a constant value over more than 15 layers inside the COF. In addition, a steeply increasing/decreasing potential (within a few layers) is present in both cases at the entrance/exit of the tubes, independently of the magnitude of the respective QPMs. Further analysis shows that the potential’s shape only depends on the pore size and stacking distance of the COF, which are very similar in both cases and only enter the model via the geometry factors r(k) (cf. Eq. (1)).
In order to investigate the influence of stacking, we compare exemplarily for COF-PcQ− the eclipsed stacking in Fig. 7a with serrated AA’ and inclined stacking fashions in Fig. 7c and d, respectively. We use a lateral shift of 1.5 Å in all cases. For AA’ stacking, the path for plotting the potential is chosen to go through the averaged pore centers as indicated in the inset. Neither qualitative nor quantitative changes are found for the potential when compared to the AA stacking. In case of inclined stacking, the path passes through the center of the pores of each layer (cf. inset of Fig. 7d). The tilt of the tube axis against the principle axis of the QPM tensor leads to small decrease of the effect by ~10%, since in-plane and out-of-plane components partly cancel along this direction. Also small variations are visible close to the surface. In general only minor changes are observed. This can be rationalized by the large unit cell of COFs as compared to the lateral displacement that is typically observed between the layers, which is a result of the van der Waals bonding. We therefore expect that a random lateral displacement will also marginally change the results.
It is finally very instructive to examine how the potential wells observed in few-layer samples gradually transition into plateaus, with their potential values reaching saturation at a specific thickness. At first glance, this appears counter-intuitive, as one might expect that adding more layers (including more QPM centers and their potentials) would result in a logarithmic increase of the overall potential that would not be limited. An increase is indeed observed for systems with less than 15 layers. However, with increasing bulk size, in-plane and out-of-plane components of the quadrupole tensors counteract each other due to their different signs. To illustrate this, we reformulate Eq. (1) in terms of in-plane and out-of-plane components, expressing the spatial difference r − r(k) through their Cartesian components Δx(k), Δy(k) and Δz(k). Using further that \({\hat{{\boldsymbol{Q}}}}_{{\rm{model}}}^{(k)}\) only depends on a single parameter Qxx, which is equal for every k (see above), we express the potential as
This form highlights the action of the in-plane components \({\left(\Delta {x}^{(k)}\right)}^{2}+{\left(\Delta {y}^{(k)}\right)}^{2}=:{\left(\Delta {\rho }^{(k)}\right)}^{2}\) and the out-of-plane components \(-2{\left(\Delta {z}^{(k)}\right)}^{2}\) of every site k. They always have different signs because the underlying QPMs are traceless. Hence, the numerator describes a double cone with 109.5° apex angle as illustrated in Fig. 8. QPMs inside the cone decrease the potential because \({\left(\Delta {\rho }^{(k)}\right)}^{2}-2{\left(\Delta {z}^{(k)}\right)}^{2} < 0\), i.e. the negative out-of-plane component dominates. Conversely, QPMs located outside the cone increase the potential, i.e. in-plane components dominate. Figure 8 further shows schematically COF systems of different bulk sizes (layer numbers) with the QPM centers indicated by blue and orange dots for a dominating in-plane and out-of-plane QPM, respectively.
This double cone structure can be used to rationalize the different regimes. In monolayer and few-layer cases, almost all QPMs lie outside the cone (indicated by blue dots) and therefore contribute via their in-plane components. These components add together with the same sign, increasing the magnitude of the potential. This no longer applies to many layers as they approach bulk systems, as illustrated in Fig. 8b. When more layers are added, the layers near the middle primarily contribute with their in-plane component, while only a few QPM centers lie within the cone. With increasing vertical distance to the cone apex, more QPM centers lie within the cone (orange dots) and therefore the potential in the center of the COF’s pore decreases by adding those layers. As a result of an increasing number of layers, the electrostatic potential decreases at the center and eventually assumes a plateau because the relevant environment of QPMs remains unchanged for shifts of the cone apex.
Interestingly, the potential changes its sign with varying d and shows a barrier at the exit of the tubes before it approaches zero for infinite distances to the sample. The barrier increases with the number of layers and converges to a finite value for the case of infinite many layers. We can illustrate this transition by shifting the double cone apex in Fig. 8c. At a certain distance to the surface, most QPMs are located within the cone giving rise to an inverted potential compared to the bulk. The magnitude of the potential values inside the pore and the barrier heights depend on the geometry, i.e. pore size, symmetry, and stacking distance. As the pore size of COFs is typically much larger than the layer distance, it is expected that the potential shape found in Fig. 7 will be prototypical for COF structures.
Discussion
In summary, we have demonstrated the strong engineering capability of quadrupole moments of molecular building blocks for the electrostatic potential within the pores of COFs, which can be described as a superposition of quadrupole fields of QPM centers located at high-symmetry points (vertices and connecting sites). Remarkably, these QPMs solely depend on the molecular constituents and linkages (local charge transfer upon bonding), which makes the model largely independent of the overall COF symmetry and structure. Once obtained from DFT, these parameters can be used to predict the electrostatic potential within any related COF with thousands of unit cells including all long-range effects (μm length scales), which would not be possible using standard DFT calculations. Possible extensions of the model in the future would include a non-local charge transfer between building blocks like in a charge-transfer salt, which is not considered at the present stage. The use of dipolar building blocks has also not been considered here for tuning the potential, mainly because of the challenging requirement to control the dipole orientation upon integration in the COF. For instance, when these building blocks are laterally bonded to the COF vertices, the dipole orientation can change (flipping of the molecule) and the dipoles can point randomly inwards or outwards. This will rather introduce disorder in the potential that is undesirable. In contrast, this is not the case for quadrupole building blocks proposed here. Another extension of the approach would be to replace the benzene linker by moieties with large QPMs.
We have further shown that the potential inside the pore converges to a constant value after a few layers. This can form a trap for ions entering the pore. The potential outside the material changes sign and forms a small barrier that can prevent ions from entering the pore. This is consistent with experimental results showing that a certain pressure is required to fill the pores and that the trapped ions remain inside a pore afterwards.
From a more global perspective, the electrostatic energy gradients proposed here represent tuneable electrostatic forces for ions and charges in the first place, which makes it interesting for application of COFs and MOFs such as energy storage or gas absorption—research topics of increasing interest. While the amount of gas uptake may depend on several factors (including pore size), the electrostatic potential and its steep gradients will certainly influence their penetration into and diffusion within COFs. For charged species we therefore envision that some will migrate much easier into the pore than others, depending on the sign of the potential (e.g. cations into negative potential). This could be further combined with a size-selectivity due to modified pore size, which could function as a selective permeable material.
For electrically neutral molecules such as H2 or CO2, a higher capacity for gas storage was reported so far only in metalated COFs and MOFs as well as doped materials, which improved the gas storage performance through polarization of these molecules, resulting in an enhanced binding strength. We suggest here a different effect in absence of such metals that is based on the quadrupole field of the COF’s building blocks and polarizes the gas molecules. In contrast to the metal ions, this QPM field is stable over time because it is inherent to the fabric of the COF. This could be a new and more facile approach in optimizing gas storage performance.
Overall, this work presents a pivotal step towards better understanding of electrostatic potentials in COFs, which is currently strongly under-investigated. It offers valuable insights and a proposal for tuning this potential that could pave the way for tailored design and applications in diverse fields such as gas adsorption, energy storage, catalysis, sensing, or for solar batteries. We hope to spark further activities along those directions.
Methods
Ab initio calculations
The QPMs of all monomeric building units were calculated from geometries that were previously relaxed using the B3LYP/6-311G** level of theory as implemented in the Gaussian program53. All other DFT calculations were carried out using the VASP package54 with PBE exchange correlation functional55, PAW pseudo potentials56 and a Γ-centered 1 × 1 × 1 grid for Brillouin zone sampling. For determining the optimal distance of layered materials, it is essential to include van-der-Waals interaction57, which were considered in the calculation using the DFT-D3 method with Becke-Johnson damping function (s8 = 0.7875, a1 = 0.4289, and a2 = 4.4407)58,59.
The 2D COF structures were geometrically relaxed by repeated sequence of ionic relaxation in the unit cell and relaxation of the unit cell size until the energy minimum was reached. For monolayer calculations, the layers were separated by a vacuum space of 25 Å to avoid artificial interaction. This slab geometry was also used for the few-layer structures.
The potentials of the optimized geometries were calculated from the Kohn-Sham potentials VKS(r)[n] but removing exchange-correlation contributions to VKS, because only external and Hartree potentials are relevant for ions and molecules. For visualization of the potential, the reference potential was fixed by basically setting V = 0 at the largest distance to the COF layers. More precisely, we calculated the plane-averaged VKS(r) over a plane parallel to the layers and at largest distance to the COF. This plane-averaged value was used to shift the electrostatic potential. Minor potential oscillations (due to tiny oscillations of the charge density) inside the pore at regions of vanishing electron density, which are numerical artifacts from DFT and do not contain any physics, have been removed for clarity in Fig. 3b and Supplementary Fig. 2 by using a Savitzky-Golay filter.
Quadrupole model
The potential is modeled with the QPMs in the path’s closest proximity, i.e. six QPMs for COF-TP’s pore and four QPMs for COF-Pc’s pore in lateral direction. In z-direction, the QPMs of two neighboring layers are included leading to overall 18 and 12 QPMs for COF-TP and COF-Pc, respectively. Analogous to the plotted potential, the ab inito potential is shifted by an offset, determined by a fitting algorithm, in order to match the modeled potential. Eq. (3) is obtained by simplifying the general relationship between a traceless QPM and point charges ql at distance rl
\(\delta \hat{{\boldsymbol{Q}}}\) for the COF-Pcs is obtained by four point charges δq according to
Data availability
The data that support the findings of this work are available from the corresponding author upon reasonable request.
Code availability
The central codes used in this paper are VASP and Gaussian, which can be requested from the code developers.
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Acknowledgements
We would like to thank the Deutsche Forschungsgemeinschaft for financial support [CRC1415, Project Nos. OR-349/3 and OR-349/11 and the Cluster of Excellence e-conversion (Grant No. EXC2089)]. Grants for computer time from the Zentrum für Informationsdienste und Hochleistungsrechnen of TU Dresden and the Leibniz Supercomputing Centre in Garching (SuperMUC-NG) are gratefully acknowledged.
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E.-A.B. performed the simulations. F.O. designed the project. E.-A.B., K.M., and F.O. discussed the results and contributed to the preparation and writing of the manuscript.
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Bittner, EA., Merkel, K. & Ortmann, F. Engineering the electrostatic potential in a COF's pore by selecting quadrupolar building blocks and linkages. npj 2D Mater Appl 8, 58 (2024). https://doi.org/10.1038/s41699-024-00496-3
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DOI: https://doi.org/10.1038/s41699-024-00496-3