Facile isolation and analysis of sporopollenin exine from bee pollen

We present facile methods to obtain purified sporopollenin exine capsules, and provide mass balances for classical and novel purification procedures. An ionic liquid, tetrabutyl phosphonium hydroxide turned out to be the most effective in removing the intine wall. The sporopollenin capsules were investigated by fluorescent microscopy, AFM, solid-state NMR and infrared Raman spectroscopy. The latter two methods showed that sunflower and rape exines have different proportions of O-aliphatic and aromatic constituents. Purified exine capsules were coated with functionalized fluorophores. The procedures presented in this paper could contribute to further spread of the applications of this hollow, and chemically highly resistant material.


Results and discussion
The workflow followed in this study is summarized in Diagram 1.
The bee pollen samples were purified by a two-phase protocol. The first phase (referred to as P1) removed soluble fats and carbohydrates, while the second one (referred to as P2) aimed to dissolve the cellulosic intine wall with the cells in its interior.
Subseqently the best P1-purified grains were investigated by fluorescence microscopy, while the best P1 + P2-purified exine shells were examined by a series of microscopy and instrumental analytical methods. Fluorescent and electron microscopy served for determining the presence and absence of the intine wall, while infrared Raman spectroscopy and solid-state NMR for deciphering some aspects of sporopollenin composition. Moreover, cleaned sunflower and rape sporopollenin shells were coated by fluorescent dyes.
First purification phase (P1): removal of the pollenkitt and the sugar-rich material cementing the pollen loads. Soxhlet extractions followed by an aqueous and acetone wash. Table 1 presents how the dry mass of the bee pollen samples altered along the Soxhlet extractions followed by a final aqueous and acetone wash. Dry matter contents of the starting samples were 96% (mixed), 96.6% (rape) and 96.6% (sunflower); the percentages of the residues at different steps were computed taking into consideration the initial dry matter content.
Most of the dry matter samples were removed by the first polar solvent (here isopropyl alcohol, IPA). Surprisingly, following the extraction with the first, nonpolar solvent, the mass of the pollen dried at 5 mbar at 60 °C increased. The reason for this could be the adsorption of these solvents into the pollen grains. We also mention that the cleansing with acetone performed after the aqueous wash did not remove a measurable amount of material. Note that due to their hygroscopic nature, the samples may absorb some humidity if removed from the desiccator.
Aqueous washes followed by isopropyl alcohol extraction. P1-purification of bee pollen samples were also implemented by a wash with water followed by a wash with IPA. The aqueous washes at different temperatures lead to similar results, except for the rape pollen, where, surprisingly, the wash with room temperature water was more efficient (Table 2). We speculate that some structural changes could occur within the rape pollen grains www.nature.com/scientificreports/ at elevated temperature which impede the purification process. The subsequent wash with IPA also removed a significant amount of soluble matter as well.
Note that washes with isopropyl alcohol followed by 10% Sodium Lauryl Sulfate (SLS) aqueous solution followed by aqueous washes did not lead to better results, likely because SLS remained attached to the pollen structures. In the protocol using centrifugation instead of filtering, the losses during the centrifugation steps could not be avoided, therefore this procedure is inadequate for setting up mass balances.
We also mention that P1-purified bee pollen grains will change color, usually turning beige, light brown, or light green. Diagram 1. Sketch of the pollen purification procedure, subsequent instrumental analysis and chemical coating. www.nature.com/scientificreports/ Second purification phase (P2): removal of the intine wall and cellular debris. Classical procedures and purification by an ionic liquid, TBPH. Mass balances of the classical P2-purification procedures were roughly the same, except the one applying room temperature phosphoric acid, which had a lower efficacy (Table 3). However, there was a difference in affecting the fine spatial structure of the sporopollenin exine shells. Optical microscopy revealed that in case of purification by enzymatic digestion (Fig. 1b), TBPH (Fig. 1c, e) or H 3 PO 4 (image not provided) the shells remain intact, while applying strong bases affected the main features of the exine structure (Supplementary Material Figure S2).
Enzymatic digestion preceded by mild acidic pre-treatment. After performing a mild pretreatment with 2% w/w sulfuric acid, a mixture of Cellic Ctec2 and NS22118 enzymes was used to solubilize the intine wall. Incubation in acidic solutions represents an effective pretreatment for industrial-scale enzymatic digestion of lignocellulosic materials. Due to its low cost, diluted sulfuric acid is the most widely used agent for acidic pretreatment 67,68 . Cellic CTec2 is a commercial enzyme mixture with proved effectiveness on a wide variety of acidically pretreated lignocellulosic substances for the conversion of the carbohydrates into monosaccharides. Cellic CTec2 exhibits high cellobiohydrolase, endoglucanase, β-glucosidase and xylanase activities 69 . Supplementation of the cellulosehydrolyzing cocktails by β-glucosidase activity (e.g. NS22118) is very often required to enhance the efficiency of the hydrolysis as β-glucosidases can act synergistically with the cellobiohydrolases and endoglucaneses 70 . Table 4 presents the mass balances of enzymatic digestion for different bee pollen samples and distinct P1 purification protocols. Note that the enzymatic digestion lead to the best results when the P1-purification was implemented by Soxhlet extractions. We speculate that the reason for this is rooted in the fact that this purification method reveals the intine wall most successfully.
Instrumental analysis. Examining intine status by fluorescence microscopy. We compared pollen samples solely P1-purified (with an intact cellulosic intine wall), with the ones having the intine wall removed by Table 1. Alteration of the dry mass of bee pollen samples following Soxhlet extractions and a final aqueous and acetone wash, compared to the initial dry mass content.   Table 3. Ratio of the dry matter content of bee pollen samples P1-purified by Soxhlet extractions and an aqueous was, before and after different P2 purifications (removal of the intine wall and the cellular debris). Classical protocols and a method using TBPH are compared. www.nature.com/scientificreports/ P2-purification using TBPH or enzymatic treatment (subsequent to a P1-purification). All of the investigated samples were stained by calcofluor white, as described above. Fluorescence imaging clearly showed the presence or absence of intine portions protruding out through the apertures of the sporopollenin exine shell (Fig. 1).
Although the sporopollenin itself also shows some autofluorescence 71,72 , the smooth, protruding intine wall could clearly be distinguished (Fig. 1a). Moreover, this method turned out to be the least expensive and most reliable to determine whether the investigated protocol had worked (the majority of the intine wall and the cellular debris had been removed) or failed (the intine was still present or the sporopollenin exine structure was visibly damaged).

Examining pollen grain integrity and intine status by environmental scanning electron microscopy (ESEM).
The results provided by the fluorescence microscopy were confirmed by ESEM, an electron microscopy method that does not require sample preparation (Fig. 2). For this purpose, we used TBPH-based P2-purification of sunflower and rape pollen, previously P1-purified by Soxhlet extractions. The pollen grains were mostly intact, and the intine wall was missing.
Note that we performed Atomic Force Microscopy (AFM) investigation as well. However, since the surface of the investigated pollen grain types was very uneven (height differences were greater than 1 µm within a region of 5 µm in diameter) our attempts were not successful.
Investigating the fluorescent coating of sporopollenin exine grains by fluorescence microscopy. In order to enable a comparison of the coated and non-coated sporopollenin exine particles, samples containing coated and noncoated sporopollenin exin grains were imaged using appropriate filter cubes (FITC for FITC coating, and mCherry for RBITC coating). Although sporopollenin exine variants have autofluorescence themselves, by using the appropriate filter cubes the difference in fluorescence of coated and noncoated particles becomes striking (Fig. 3). www.nature.com/scientificreports/ Structure details disclosed by solid-state NMR spectroscopy. Samples of P2-purified sporopollenin grains, resulting from sunflower and rape, previously P1-purified by Soxhlet extractions and an aqueous wash, were investigated by 13 C/ 1 H CP-MAS NMR. The solid-state NMR spectra turned out to be similar to the previously published spectra of pine sporopollenin. The strongest peaks in our novel sunflower and rape sporopollenin spectra were identified by comparing them with the previously published pine spectrum 1 (see Figs. 4, 5, as well as Tables 5, 6.). First, we discuss the findings on the samples treated by TBPH (Fig. 4, Table 5). The 10-90 ppm aliphatic region contains several characteristic peaks. Both of our samples contain relatively sharp TBPH butyl signals (a, b and  Table 4. Average ratio of the dry matter content of bee pollen samples P1-purified by different methods, before and after enzymatic P2 purification (removal of the intine wall and the cellular debris). Results of four experiments were averaged. The results are corrected with the losses occurring during the purification procedure. Losses were estimated by applying a similar purification protocol without using enzymes. www.nature.com/scientificreports/ c) which are completely missing from the spectra of the same sporopollenins treated with the enzyme cocktail (see Table 6, where there are no peak data in the range of 14-24 ppm). The 30-50 ppm region shows aliphatic carbon signals of the sporopollenins in three broad, overlapping peaks (d, e, f). Peak d is identified as the signal of the C16 aliphatic unit. Peak e is significantly higher in the rape sample (B), than in the sunflower one (A). The 60-80 ppm range contains two overlapping signals of the oxygen-bearing, PVA-like carbons in both samples (signal g and h). The peak i belongs to the acetal group which forms a crosslink between the two PVA-like units and the 7-O-p-coumaroylated C16 aliphatic unit. In order to reveal the differences between the structure of the rape and sunflower sporopollenins, we compared the integrals of the very broad aromatic carbon signals (j and k) of coumaric acid in the range of 106-165 to the area of g-h (O-aliphatic) peaks. The integral ratio is 15.7%:84.3% in the case of sunflower (A) and 35.2%:64.8% in the case of rape (B) spectrum which means that the sunflower sporopollenin contains much less coumaric acid groups than the rape sporopollenin. The signal l belongs to carbonyl carbons which are mostly the peaks of the terminal carboxylic groups and not of the alpha-pyrone because of the missing alpha-pyrone signals at 90 ppm.
The 13 C/ 1 H CP-MAS NMR spectra of enzymatically treated sunflower (A) and rape (B) sporopollenins are compared in Fig. 5 and Table 6. The sunflower and rape sporopollenin spectra are similar to each other, except for two higher aromatic peaks (i and k) in the rape sample. The aliphatic range of 20-90 ppm contains the carbon signals of the C16 units (a, b), and the CH 2 signals of the different -CH 2      However, the difference in the ratios measured for samples P2-purified by TBPH and the enzyme cocktail indicates that the treatment with TBPH more efficiently decreases the signals of the aromatic compounds (see i, j, k, and l signals in Fig. 5) of the pollen grains than the enzymatic process. The reason for this is unknown. We cannot exclude that the TBPH might remove some aromatic groups from certain regions of sporopollenin, without affecting the macroscopic structure of the exine. Further investigations using fractured exine shells and instrumental analytics are needed to clarify this issue.
NIR Raman spectroscopy confirms findings obtained by the solid-state NMR spectroscopy. Near-infrared FT-Raman spectra of sporopollenin exine samples from sunflower and rape pollen P1-purified by Soxhlet extractions and an aqueous wash and subsequently P2-purified by TBPH are shown in Fig. 6. Raman bands arising from aliphatic chains are clearly identified at about 2910 cm −1 (mostly CH 2 stretching) and 1444 cm −1 (CH 2 scissoring), while aromatic ring vibrations show up at around 1600 cm −1 , the rest of bands in the 1300-1000 cm −1 region may be related to C-C skeletal, aromatic in-plane C-H bending as well as stretching vibrations of C-O bonds. Beside evident similarities, the spectra show some characteristic differences, especially concerning the intensity ratios of Raman bands of aliphatic and aromatic components.
In concordance with the solid-sate NMR spectra, Raman spectroscopy results suggest that sunflower exine is richer in saturated, aliphatic components (higher-intensity of bands at 2910 and 1444 cm −1 ) than rape exine, where the 1600 cm −1 band, related to aromatic components is also stronger.
Autofluorescence spectra. Emission autofluorescence spectra for excitations at 300, 400 500 and 600 nm for sporopollenin exine samples P1-purified by Soxhlet extractions and an aqueous wash and P2-purified by TBPH, are shown in Supplementary Material Figure S1. As the excitation wavelength increased, the intensity of the autofluorescence decreased.

Experimental procedures
Bee pollen samples. Our core investigations were conducted on three types of bee pollen samples dried in laminar air flow at 40 °C. Rape had a purity of 100%, Sunflower of 93% (with 7% maize), and we examined a mixed pollen sample as well. The compositional analyses of the samples are listed in Supplementary Material Table S1.
Rape pollen was collected by a beekeeper in nort-western Hungary (Szigetköz region), while the sunflower by one in central Hungary (Fejér county). The mixed sample is a conglomerate of pollen samples collected in different Hungarian and Transylvanian regions in various seasons.
Removing soluble compounds outside the cellulosic intine wall (P1 purification phase). Soxhlet extractions. Soxhlet extractions of 100 g of bee pollen grains were performed in two types of extractors. In the thinner one, having an inner diameter of 5 cm, the height of the pollen column was 10 cm, the highest level of the solvent column above the pollen was 5 cm, and an extraction cycle took about 5 min. In the thicker one, with an inner diameter of 6.5 cm, the height of the pollen column was 6 cm, the highest level of the solvent column above the pollen was 10 cm, and a cycle took about 15 min. www.nature.com/scientificreports/ The overall time of the extraction was 7 h. The volume of the solvents was 1 L (chloroform, isopropyl alcohol and methanol), while the extractors were equipped with 2 L round-bottomed flasks. The amount of the material extracted with the individual organic solvents was determined after rotational evaporation and subsequent drying at 60 °C at 5 mbar for 1 h.
Note that during extractions with chloroform and isopropyl alcohol the pollen grains stuck together while channels were formed within the material in the Soxhlet extractor. Therefore, in order to make the extraction more efficient, the pollen in the extractor was stirred several times.
After the extraction with methanol, the samples in the thin and thick extractors were combined, stirred for 3 h in 1 L of hot water, filtered on a glass filter (resulting in a clear flow, meaning that no pollen grains were lost) and dried at 60 °C at 5 mbar until weight constancy was achieved.
Finally, a last round of Soxhlet extraction with acetone was performed. This purification step did not remove any further material. The consistency of the resulting purified substance was a brittle solid, not a fine powder.
Washes with water and isopropyl alcohol. Aqueous washes were performed with hot (90-100 °C) as well as room temperature water, respectively. 100 g of bee pollen grains was mixed with 1 L of water and stirred for 3 h with a mechanical stirrer at 700 rpm.
Stirring in hot water was followed by filtering on a pre-heated glass filter. Heating of the filter (by rinsing it with hot water) was necessary to avoid the blocking of the filter by the waxy compounds. The pollen on the filter was rinsed with 300 mL of hot distilled water and dried in a vacuum desiccator over P 2 O 5 until weight constancy was achieved.
Stirring in room temperature water was followed by decantation. The waxy material on the water surface was removed, while the rest was filtered. Again, the substance on the filter was rinsed with 300 mL of distilled water and dried in a vacuum desiccator over P 2 O 5 until weight constancy was achieved. Note that the filtering in this case took several hours.
Finally, 30 g of dry material previously washed with hot water was homogenized in 300 mL of refluxing (80 °C) isopropyl alcohol; and 30 g of dry pollen previously washed with cold water was homogenized in 300 mL of room temperature isopropyl alcohol and the solutions were stirred for 3 h. Subsequently, they were filtered on a glass filter, rinsed with 100 mL of isopropyl alcohol having the same temperature, and dried in a vacuum desiccator over P 2 O 5 until weight constancy was achieved. The resulting material was a fine powder.
Washes with isopropyl alcohol and Sodium Lauryl Sulfate aqueous solution. 20 g of bee pollen grains was mixed with 200 mL of isopropyl alcohol, stirred for 3 h at room temperature, filtered on a glass filter, rinsed again with 50 mL of isopropyl alcohol and dried. Subsequently, the samples de-fatted in this way were stirred in 100 mL of 10 m/m % sodium lauryl sulfate solution for 3 h, washed five times with 100 mL of distilled water, filtered and dried in a vacuum desiccator over P 2 O 5 until weight constancy was achieved.
In an alternative protocol, 150 g of bee pollen grains was mixed with 750 mL of 10 m/m % sodium lauryl sulfate solution and was let to stay for a day at room temperature. Subsequently it was centrifuged for 10 min at 5000 g, filled up with 500 mL of distilled water, and mixed. The procedure was repeated 6 times. Finally, the material was rinsed on a glass filter with 2 L of distilled water and 1 L of isopropyl alcohol and subsequently dried in a vacuum desiccator over P 2 O 5 until weight constancy was achieved. However, this latter protocol led to the loss of some material while removing the supernatant after the centrifugation steps and turned out to be inadequate for measuring mass balances.
Both protocols yielded a fine powder.

Dissolution of the cellulosic intine wall (P2 purification phase).
Hot 85% phosphoric acid. 10 g of pollen P1-purified by Soxhlet extractions was immersed in 75 mL of 85% phosphoric acid at 90-95 °C for 5 h and was vigorously shaken every hour. Subsequently the material was vacuum-filtered, rinsed with 50 mL of phosphoric acid and 300 mL of distilled water. The time required for filtering varied between a couple of hours and one day. The treatment with strong acid resulted in a dark brown material. After rinsing with distilled water, the shade of the color became lighter. The resulting samples were dried in a desiccator over P 2 O 5 until weight constancy was achieved.
Room temperature 85% phosphoric acid. 10 g of pollen P1-purified by Soxhlet extractions was stirred in 75 mL of 85% phosphoric acid at room temperature for 5 days and was shaken several times every day. The procedure was the same as for the hot acid. Note that the vacuum filtering required significantly less time than in the case of the hot acid.
Hot 10% potassium hydroxide aqueous solution. 10 g of pollen P1-purified by Soxhlet extractions was stirred in 50 mL of 10% potassium hydroxide (KOH) solution at 90-95 °C for 5 h and was vigorously shaken every hour. Subsequently, the material was filtered in vacuo and rinsed with 50 mL of potassium hydroxide solution, and 300 mL of distilled water. The time required for filtering varied between a couple of hours and 2 days. The procedure resulted in dark brown material. After rinsing with distilled water, the shade of the color became lighter. The washed samples were dried in a desiccator over P 2 O 5 until weight constancy was achieved.
Room temperature 10% potassium hydroxide aqueous solution. 5 g of pollen P1-purified by Soxhlet extractions was stirred in 200 mL of 10% potassium hydroxide solution at room temperature for 5 days and was shaken www.nature.com/scientificreports/ several times every day. The procedure was the same as for the hot alkaline. Note that in this case the vacuum filtering required significantly more time.
2-Ethoxyethanol (Cellosolve). 5 g of pollen P1-purified by Soxhlet extractions was stirred in 50 mL of Cellosolve for 5 h, while being shaken every hour. Subsequently the material was filtered in vacuo and rinsed with 25 mL of Cellosolve and 50 mL of acetone. The washed samples were dried in a desiccator over P 2 O 5 until weight constancy was achieved. Note that the mass loss during the procedure using Cellosolve was either minimal, or, for sunflower pollen, even a slight mass increase occured. We speculate that the solvent could bind to the pollen grains. However, the consistency of the substance was unequivocally altered. The rigid, brittle material resulting from Soxhlet extractions was transformed into a fine powder.
Ionic liquid: 40% tetrabutylphosphonium hydroxide aqueous solution (TBPH). 0.5 g of pollen P1-purified by Soxhlet extraction was stirred with a magnetic stirrer in 5 mL of TBPH for 2 days at room temperature. Subsequently the material was filtered in vacuo and rinsed with 50 mL of distilled water. The washed samples were dried in a desiccator over P 2 O 5 until weight constancy was achieved.
In order to decrease the damage of the pollen grains, stirring can be replaced by shaking, while vacuum filtering by centrifugation at 3000g for 10 min. In this case, the removal of the TBPH was implemented by two centrifugation and resuspension steps using distilled water. Drying was speeded up by subsequent resuspensions in isopropyl alcohol and hexane, followed by centrifugation.
Enzyme cocktails. In order to find the most efficient enzyme mix for dissolving the cellulose-rich intine wall, we tested a series of lignocellulose-degrading enzyme cocktails (Cellic CTec2, NS22086-Cellulase complex; NS22119-Enzyme complex; NS22002-Hemicellulase; and NS22118-β-glucosidase). All of these were provided by Novozymes A/S (Bagsvaerd, Denmark). A mixture of Cellic CTec2 (main activity: cellulase) and NS22118 (main activity: β-glucosidase) turned out to be the most effective for intine dissolution, and the results presented in the paper were implemented by a combination of these two cocktails. Filter paper activity of Cellic CTec2 was 142 FPU/mL, while the β-glucosidase activity of NS22118 was 318 IU/mL. Note that one unit of filter paper activity (FPU) is defined as the amount of released glucose (μmol) per minutes at 50 °C and pH 5 using Whatman No. 1 filter paper (Sigma) as substrate, and one unit of β-glucosidase activity (IU) is the amount of released glucose (μmol) per minutes at 50 °C and pH 5 using 4-nitrophenyl-β-d-glucopyranoside (Sigma) as substrate.
Dilute acidic pretreatment of soxhlet and water-isopropanol purified pollen grains. 0.15 g of pollen samples P1-purified by several protocols were dispersed in 5 mL of 2% w/w sulfuric acid solution and treated for 1 h at 120 °C in a pressurized autoclave. After this procedure, the pollen grains were separated from the supernatant by centrifugation (6000g, 10 min) and washed two times with acetate buffer (100 mM, pH 5). Dilute acid pretreatments were carried out in triplicates.
Enzymatic hydrolysis. Pretreated and washed pollen samples were resuspended in 5 mL of enzyme solution containing 0.85 FPU of Cellic CTec2 and 0.29 IU of NS22118 in acetate buffer (100 mM, pH 5). The enzymatic hydrolysis was performed at 50 °C under continuous shaking for 24 h. To avoid microbial contamination, 20 mg of Thimerosal (Sigma) was added to 1 L of the enzyme solution. After enzymatic hydrolysis of the intine, the sporopollenin exine shells were separated from the supernatant by centrifugation (6000g, 10 min) and washed with distilled water two times. Dehydration took place in a drying chamber (50 °C) for 3 days. Enzymatic hydrolyses were carried out in triplicates.
Chemical coating. The surface of the P1-, and P2-purified sporopollenin was coated with functionalized fluorescent dyes. Rhodamine B isothiocyanate and Fluorescein isothiocyanate (Sigma-Aldrich, Germany) were attached to the amino groups on the surface of the sporopollenin exine shells as described below. Our protocol can be regarded as a model for exine coating by further compounds with isothiocyanate or other reactive functional groups.
RBITC and FITC coating was implemented as follows. 5 mg of Rhodamine B isothiocyanate was added to a suspension of 10 mg of purified sporopollenin exine in 200 μL of DMF (N,N-dimethylformamide). The resulting suspension was shaken for 2 days. The pollen grains were separated by centrifugation and washed repeatedly with DMF until the color of the dye (RBITC of FITC) was not visible in the rinsing solution. Subsequently, the functionalized sample was washed twice with water, isopropyl alcohol, tetrahydrofuran and dried under vacuum. A similar procedure was applied for FITC coating.
Instrumental analysis. Fluorescent microscopy. Integrity and shape of pollen grains was checked by brightfield microscopy.
Fluorescence microscopy was used, on one hand, to check the presence or absence of the cellulosic intine, and on the other hand, to examine the coating of the exine shells with fluorescent dyes. Images were taken at RT using an AxioImager Z1 epifluorescent microscope (Zeiss) equipped with an Apotome grid confocal unit and a HBO 100 mercury lamp, using AxioCam MRm camera and EC Plan-Neofluar 40 × NA = 0. 75  www.nature.com/scientificreports/ In order to investigate the condition of the intine, calcofluor white 73-76 , a non-specific fluorescent stain was applied, which binds to structures containing cellulose, callose and chitin. Pollen grains were immersed either in 50% m/m aqueous solution of glycerol or in 1% m/m agarose gel, both containing a 1:1 v/v dilution of the calcofluor white solution (Sigma, 18909, Calcofluor white M2R 1 g/L, Evans blue 0.5 g/L). For fluorescent imaging, DAPI filtercube was used. Note that the sporopollenin exines show an autofluorescence as well (see Supplementary Material Figure S1). Therefore, our attention was primarily focused on the presence or absence of intine portions which protrude through the exine apertures.
To investigate RBITC and FITC coating, coated pollen grains were immersed in water or 50% m/m aqueous solution of glycerol. For the fluorescent imaging, mCherry and FITC filter cubes were used, respectively.
Solid-state NMR. The solid state 13 C spectra were recorded at 125.77 MHz using cross-polarization (CP) and magic angle-spinning (MAS). Bruker Avance III 500 MHz spectrometer and Bruker 4 mm BB-1H MAS probe were used. Spectra were obtained with the following parameters: relaxation delay of 5 s, spectrum window of 80 kHz, sample spin-rate of 10 kHz. 2048 data points were acquired during 12.9 ms, with a SPINAL-64 1H decoupling sequence. A shaped Ramp 90-100% 1 H pulse was used to get more efficient dipolar interaction during the CP. Spectra are referenced to an external sample of tetramethylsilane.
Raman spectroscopy. Sporopollenin variants show a strong autofluorescence when illuminated with ultraviolet or visible light. This makes it challenging to record high-quality Raman spectra using UV-VIS excitation [77][78][79] . However, when excited with NIR light, their autofluorescence is minimal. Therefore, we decided to perform FT-Raman spectroscopy employing near-infrared (1064 nm) excitation laser. Although near-infrared lasers are often used to record Raman spectra of biological samples showing strong fluorescence for the visible range, they have certain disadvantages. The lower energy of the near-infrared laser strongly reduces the efficiency of the Raman-scattering which may lead to decreased S/N ratio and potentially require much longer measurement time. Near-infrared lasers can also overheat the sample.
The FT-Raman spectra were recorded with a Bruker IFS55 Fourier-transform infrared (FTIR) spectrometer equipped with a FRA 106 Raman extension unit (Bruker Optik GmbH, Ettlingen, Germany), using a 500 mW 1064 nm Nd:YAG laser source operated at 100 mW laser power and a liquid nitrogen cooled Ge detector. The FT-Raman spectra of sporopollenin exine samples, placed in the standard solid sample holder of the instrument using a 180° back-scattering arrangement, were recorded at 4 cm −1 instrumental resolution in the 4000-100 cm −1 wavenumber (Raman-shift) range, and at least 2048 scans were accumulated. The raw spectra were baseline corrected for fluorescent background and a 19-point smoothing was applied for noise reduction.
Fluorescence analysis. Fluorescence spectra have been recorded by a Spex FluorMax fluorimeter. 20 mg of rape or sunflower exine purified by Soxhlet extractions and TBPH was dispersed in 5 mL of distilled water in a 10 × 10 mm quartz cuvette equipped with a magnetic stirrer. Monochromatic light of 300 nm, 400 nm, 500 nm and 600 nm was used to excite the sample. Emission spectra were recorded using wavelength windows of 10 nm, and integration time of 2 s ( Figure S1a). We also recorded fluorescence spectra using a Raman microscope (Supplementary material Figure S1b).
Scanning electron microscopy. Scanning electron microscopy (Hitachi 2360 N, 25 keV, Robinson BSE detector) was used to check the integrity of pollen grains in low vacuum mode without any coating, after different treatments.

Conclusions
By measuring mass balances, we quantitatively compared the efficiency of different protocols to obtain purified sporopollenin exine capsules of several bee pollen types.
The most effective protocol (that removed the most material) for P1 purification phase comprised a series of Soxhlet extractions applying solvents of growing polarity, and a final wash with hot water (residues for different types of bee pollen were between 19 and 27%). Note that washes with hot water and isopropyl alcohol led to almost as good results as the series of Soxhlet extractions.
In order to remove the cellulosic intine and the cellular debris, while keeping the sporopollenin exin grains intact, a cheap and simple enzymatic method has been developed. The key improvements of our method are (1) the acidic pre-treatment of the sample, which makes the enzymatic digestion more effective, and (2) the use of a novel enzyme cocktail for dissolving the intine coat.
Efficacy of various classical and novel P2 purification protocols has also been compared. Our novel enzymatic intine removal lead, for different types of bee pollen, to residue ratios between 18 and 28%, while the treatment with TBPH resulted in 12-32%. Note that the enzymatic treatment does not affect the exine. The TBPH also keeps the macroscopic sporopollenin exine structure intact, but its influence on the exine has not completely been understood.
Calcofluor white staining and fluorescence microscopy seemed to be the most robust method to examine the presence or absence of the cellulosic intine. Instrumental analytical methods like VCD (vibrational circular dichroism) or FTIR-ATR (Fourier transform infrared spectroscopy-attenuated total reflection) did not lead to conclusive results.
An exceptionally interesting result was provided by the solid-state NMR and NIR Raman spectroscopy. Both methods confirmed that the ratio of the aromatic to O-aliphatic compounds is higher in rape than in sunflower exine.