Environmental and molecular approach to dye industry waste degradation by the ascomycete fungus Nectriella pironii

Textile industry effluents and landfill leachate contain chemicals such as dyes, heavy metals and aromatic amines characterized by their mutagenicity, cytotoxicity and carcinogenicity. The aim of the present study was investigation of the ascomycete fungus N. pironii isolated from urban postindustrial textile green space for its ability to grow and retain metabolic activity in the presence of the dye industry waste. Research focused mainly on dyes, heavy metals and aromatic amines, which had been detected in landfill leachate via HPLC–MS/MS analysis. Presence of all tested compounds as well as leachate in the growth medium clearly favored the growth of fungal biomass. Only slight growth limitation was observed in the presence of 50 mg L-1 o-tolidine. The fungus eliminated o-tolidine as well as dyes at all tested concentrations. The presence of metals slightly influenced the decolorization of the azo dyes; however, it was still similar to 90%. During fungal growth, o-tolidine was hydroxylated and/or converted to toluidine and its derivatives. Laccase and cytochrome P450 involvement in this process has been revealed. The results presented in the paper provide a valuable background for the development of a fungus-based system for the elimination of toxic pollutants generated by the textile industry.


Scientific Reports
| (2021) 11:23829 | https://doi.org/10.1038/s41598-021-03446-x www.nature.com/scientificreports/ bladder cancer 16 . The European Union has banned the usage of azo dyes that release one or more of 22 aromatic amines classified as potential carcinogens in textile materials above a threshold concentration of 30 mg kg -117 . Numerous physical and chemical methods as well as their combinations have been developed for deleterious components of textile wastewater elimination. However, these methods are often combined with high operation costs and low efficiency, which make them economically unsuitable, especially for small enterprises 18 . Additionally, during some chemical methods, e.g., oxidation or ozonation, hazardous intermediates are formed 19 . Methods based on biological degradation are more environmentally friendly and less expensive and can be an encouraging alternative for toxic compound elimination in polluted areas 18,[20][21][22] . However, dyeing processes involve not only a variety of colorants but also different alkalis, organic and inorganic salts, acids and heavy metals; hence, it is essential to seek microorganisms that not only decolorize dyes but also retain their properties in conditions unfavorable for the metabolic activity of most microorganisms.
Thus, the proper selection of microbial strains for hazardous waste elimination seems to be one of the most important factors influencing the biodegradation efficiency because only microorganisms adapted to the conditions specific for waste from the dye industry will be fully active in this habitat.
With this in mind, the ascomycete fungus N. pironii, previously isolated from urban postindustrial textile green space, was applied in the elimination of dyes and aromatic amines used for their production 23 . The work focused on assessing the suitability of this fungus for the utilization of leachate from a waste landfill of the former "Boruta" Dye Industry Plant in Zgierz (Poland). The biodegradation of o-tolidine and azo dyes detected in the landfill leachate has also been demonstrated. Dye decolorization in the presence of heavy metals has been investigated. Preliminary identification of the mechanisms responsible for fungal degradation was carried out. Laccase and cytochrome P450 (CYP) involvement has been revealed, which may allow the design of efficient systems for the elimination of these deleterious contaminants from textile postindustrial areas.

Results and discussion
Characteristics of the landfill of the former "Boruta" Dye Industry Plant and the landfill leachate. The dye industry waste landfill is located within the town boundary of Zgierz ( Fig. 1) near the former "Boruta" Dye Industry Plant (now a special economic zone with different industrial factories including dye houses). The landfill consists of one plot with an area of 0.81 ha and a cubature of 50,376 m 3 , limited by a dike 24 . It is adjacent to the closed energy ash and gypsum landfill. The total surface of the area is approximately 10 ha. The slopes of the landfill are 4-6.5 m high (Fig. 2a). The bottom of the storage basin and the slopes are sealed. The waterproofing was made of native soil in the form of sandy loams with a thickness of 5 to 10 m, on which a levelling layer of medium-grained sand was laid. Above it, a 2 mm thick geomembrane and a filtering layer   32 found that the electrolytic conductivity in groundwater samples around municipal waste landfills ranged from 373.4 µS cm -1 to 998.8 µS cm -1 , and it was concluded that mineral substances originating from mineral wastes deposited in landfills caused the results.
Our chromatographic study additionally revealed the following toxic aromatic amines: o-tolidine (0.3 and 0.43 mg L -1 , respectively) and 3,3'-dioxyaniline (0.23 and 0.03 mg L -1 , respectively) in both leachate samples L1 and L2. According to information obtained from the state and local control units (see Acknowledgements), aromatic amines have not been detected in the effluents released by the treatment plant into the Bzura River. However, the high amount of iron in leachate samples L1 and L2 (Table 1) indicates corrosion of the metal containers stored in the landfill. For this reason, there is a high probability of releasing much larger amounts of toxic amines and other harmful chemicals that will be introduced to the sewage treatment plant. Jasim et al. 33 showed the presence of several aromatic amines (including benzidine and its derivatives, e.g., o-tolidine) in effluents collected from different stages of refinery industrial wastewater treatment plants and from the Tigris River around the station. The range of identified amines was from nondetected to almost 0.3 mg L -1 . Benzidine, o-toluidine, 3,3-dimethylbenzidine, and 3,3-dichlorobenzidine were detected by Mazzo et al. 34 in river receiving wastewater from a textile industry, which was previously treated by the industry using activated sludge. This clearly shows that currently used wastewater treatment methods have a limited capacity for aromatic amine removal. Therefore, it is necessary to search for additional environmentally friendly methods and/or microorganisms that efficiently support the elimination of these dangerous pollutants.
N. pironii growth in dye industry landfill leachate presence. The results of N. pironii growth on Sabouraud medium supplemented with 10, 20 and 40% v/v leachate are presented in Fig. 3. The presence of leachate in the growth environment clearly favors the growth of fungal biomass. In the presence of 10% of the leachate, the biomass content in the culture after 120 h of incubation was almost twice as high for leachate L1 (14.6 g L -1 ) and more than twice as high for leachate L2 (19.6 g L -1 ). In the sets containing 20 and 40% of the leachate, a greater increase in the biomass of the fungus was also observed than in the control; however, it was lower than in the culture with the addition of 10% of the leachate. These data seem to indicate the presence of inorganic contaminants in both leachates slow down the biosynthesis processes at higher concentrations and be the cause of the lower growth at 20 and 40% of the leachate in the fungal cultures (Fig. 3).
o-tolidine and azo dyes elimination. The leachate analysis (Table 1) also revealed the presence of aromatic amine o-tolidine and volatile phenols, which are used for the production of soluble azo dyes and insoluble pigments, particularly in the textile industries. From the mid-seventies of the last century until the restructuring of the dye production plants in Zgierz at the beginning of this century, the leading activity of the factory was combined with the benzidine department and synthesis of many kinds of azo dyes. Additionally, the new enterprises established on the site of the "Boruta" plants are involved in the production of this group of dyes 3,35 . The amount of o-tolidine in the effluents (Table 1) is relatively low (0.3 and 0.43 mg L -1 for L1 and L2, respectively), but the high iron content (23.8 and 23.1 mg L -1 Fe for L1 and L2, respectively) seems to indicate that this is corrosive to metal containers and that there may be a significant release of waste stored there, including aromatic o-tolidine biodegradation. Production of the dry mass of mycelium was assessed in cultures containing 0.5, 5, 10 or 50 mg L -1 o-tolidine, and the elimination of this compound from the growth medium was assessed using HPLC-MS/MS analysis. The microorganisms were able to grow in the presence of all tested o-tolidine concentrations (Fig. 4A). In the first 3 days of cultivation, the biomass determined in all test samples was similar and was in the range of 6-8 g L -1 . After 72 h, growth inhibition of the fungus appeared in the cultures containing the highest concentration tested. In samples containing 50 mg L -1 o-tolidine taken after 96 h of cultivation, mycelium growth was limited by approx. 20%. At the same time, the time course of different concentrations of o-tolidine elimination was studied via HPLC-MS/MS analysis. It has been shown that microorganisms are able to eliminate o-tolidine from the growth medium at all tested concentrations (Fig. 4B). After 24 h of cultivation, almost 65% loss of the tested compound was found at the lowest of the tested concentrations. In cultures containing 5, 10 and 50 mg L -1 o-tolidine, the elimination after 24 h of culture was 35, 19 and 16%, respectively. A significant increase in the rate of o-tolidine degradation in these systems was observed after 96 h of cultivation. The xenobiotic content in the cultures initially containing 5, 10 and 50 mg L -1 decreased to 8-14% of the initial concentration and was 0.48, 1.34 and 4.11 mg L -1 , respectively.
There are limited studies on aromatic amine biodegradation. Removal of these compounds was described mainly for aromatic amines from pesticides, drugs and dyes [36][37][38][39] . Various species of bacteria, e.g., Bacillus sp., Pseudomonas sp., Proteus sp., Serratia sp., Enterobacter sp. have been described as effective in aromatic amine biodegradation 40,41 . Previously, de Lima et al. 37 reviewed papers describing "microbial bioremediation of aromatic amines" between 2015 and 2017 and found a lack of works employing fungal cells. Most of the work was on the biodegradation of primary or sulfonated amines.
In the present study, o-tolidine was transformed mainly to less toxic 3,3'-dihydroxybenzidine (m/z 217) (Fig. 5). According to Brüschweiler and Merlot 15 , this compound gave negative results in the Ames screening test at concentrations ranging from 3-5,000 μg plate).
Additionally, in the cultures, acetyl o-toluidine (m/z 150.2) and n-hydroxy-o-toluidine (m/z 124) were identified. Mass spectra of the obtained metabolites were compared to the literature data. This suggests that o-tolidine may be hydroxylated (e.g., by extracellular laccase) and/or may be converted to toluidine and its derivatives. This is the first report on o-tolidine biotransformation by microscopic fungi. The obtained results may fill the gap in  Azo dyes decolorization in the presence of heavy metals. The azo dye decolorization potential of the N. pironii fungus was assessed by examining its ability to degrade various dyes (Supplementary Table S1 online). The most efficient colour removal was observed for monoazo dye Acid Orange 7, followed by Reactive Red 120, a dye with a diazo bond. Just after 48 h of incubation, 79% of AO 7 and 75% of RR 120 were decolorized. Extending the cultivation time only slightly increased the level of decolorization, which indicates that dye elimination occurs mainly during the first 48 h of culture.
Considering that textile effluents are a mixture of pollutants containing dye residues, salts, heavy metals and many other chemicals used during dyeing, further study was carried out to examine the effect of selected metals on azo dye decolorization ability and N. pironii growth. The metals chosen were Cd(II), Cr(VI) and Zn(II), representing those commonly discharged in dye wastewaters 42 . The decolorization rate of RR 120 by N. pironii was affected mainly by Zn(II) added as a single metal (Fig. 6b). Decolorization noted in 24 h of cultivation in the presence of this metal was 24% lower than in the cultures conducted without metal addition. In turn, Cr(VI) and  www.nature.com/scientificreports/ Cd(II) had only a very small or no effect on colour removal. When a metal mixture was used, decolorization was reduced by more than half. However, after 48 h of cultivation, no differences were observed in the tested systems. Initially, AO 7 decolorization was gently stimulated by the presence of the metals added individually (Fig. 6a).
The presence of chromium, cadmium and zinc ions in the growth medium increased dye decolorization by 7%, 16% and 13%, respectively. However, these differences became less apparent in the next days of culturing. The addition of a mixture of all the tested metals significantly reduced the elimination of the dye by the fungus. This was particularly evident at 48 h of culture. The elimination of AO 7 in the presence of a metal mixture reached only 24%, while in the control system, the fungus removed 58% of the dye. Anwar et al. 43 tested 38 bacterial strains for their potential to decolorize RR 120 in the presence of 25 mg L −1 Cr(VI). Only the strain identified as Acinetobacter junii showed the potential to simultaneously remove Cr(VI) and the selected azo dyes in the same medium. Similarly, the strain of Pseudomonas sp. showed good potential for decolorization of structurally diverse types of azo dyes in the presence of chromium, cadmium, zinc and lead ions. Furthermore, the bacterium reduced Cr(VI) by 41 to 95% along with concurrent decolorization of RR 120 44 . High dye removal (88-97%) was observed during growth, while the removal percentage for heavy metals ranged from 58 to 75%. In real sewage from the textile industry, dyes are accompanied by other harmful compounds, e.g., heavy metals or amines used as dye precursors 45 . Therefore, the microorganisms used in dye biodegradation processes should also be resistant to the harmful effect of other substances present in sewage and should have the ability to perform biodegradation under such conditions 46 . Laccase and cytochrome P450 involvement in o-tolidine biotransformation. Involvement of laccase in o-tolidine biotransformationPreviously, N. pironii was described as an efficient laccase producer 23 . Thus, laccase activity was also estimated in the presence of o-tolidine at concentrations of 0.5, 5, 10 and 50 mg L -1 . The results are presented on Fig. 7a. During the first two days of incubation with N. pironii, the laccase activity was low. However, after 72 h of incubation in cultures with the addition of 10 and 50 mg L -1 o-tolidine, the laccase activity was highest (22.8 and 52.7 U mg -1 protein) compared to the control (14 U mg -1 protein). Subsequently, laccase activity increased with increasing concentrations of o-tolidine. In the cultures with 10 and 50 mg L -1 o-tolidine, similar levels of laccase activity were achieved and were found to be 141.8 and 145.3 U mg -1 protein, respectively. The activity of the enzyme was the highest at 120 h in the presence of 50 mg L -1 o-tolidine and reached almost 253.4 U mg -1 protein.
In fungi, laccases are activated during the secondary metabolic phase of growth, which is caused by the depletion of nitrogen sources 47 . Although laccases are generally produced in low concentrations, supplementation of the growth medium with appropriate inducers such as metal ions, amino acids or aromatic compounds may increase their production and cause the production of new isoforms of enzymes 48,49 . Interestingly, an increased laccase activity in a Trametes versicolor culture was found to be supplemented with different compounds of industrial origin, such as nonylphenol or aniline 50 . The highest laccase activity in the presence of o-tolidine (10 and 50 mg L -1 ) obtained in this study may result from o-tolidine biotransformation and its metabolites, which affect enzyme production. Laccase production is influenced by different factors (such as phenolic and nonphenolic inducer presence and carbon and nitrogen source depletion). Knowing that the biodegradation of o-tolidine involves laccase, it will be possible to control this process (increase its efficiency) by changing the environmental parameters and growth medium composition. In the future, the possibility of using pure N. pironii laccase for the elimination of o-tolidine and other toxic compounds derived from the textile industry will be tested.

Cytochrome P450 monooxygenase involvement in o-tolidine biodegradation.
Fungal cytochrome P450 monooxygenases, due to their versatile catalytic properties, are involved in many various and essential cellular processes. They catalyse the conversion of hydrophobic intermediates of primary and secondary metabolic pathways, detoxify natural and environmental pollutants and permit fungi to grow under different www.nature.com/scientificreports/ conditions 51,52 . Several investigations were conducted to determine cytochrome P450 involvement in the decolorization of dyes 53 or elimination of xenobiotics. For example, our research team previously found involvement in the degradation of tributyltin (TBT) by Cunninghamella elegans 54 , 2,4-dichlorophenoxyacetic acid (2,4-D) by Umbelopsis isabellina 55 , 4-n-nonylphenol (4-n-NP) by Metarhizium robertsii 56 or chloroxylenol (PCMX) by C. elegans IM1785/21GP 57 . The involvement of cytochrome P450 monooxygenases of the N. pironii strain in o-tolidine biodegradation was verified using the competitive inhibitor 1-aminobenzotriazole (ABT). As shown in Fig. 7b, after the first 24 h of incubation with ABT, the removal of o-tolidine was partially inhibited and its content reached 88.7%, while in cultures without inhibitor, it was 98.8%. Additionally, after 72 h of cultivation in the presence of ABT, o-tolidine residue was decreased to 24.5%, while in the control, it reached 30.4%. However, after 120 h, the elimination of o-tolidine was almost at the same level. The results indicate that cytochrome P450 monooxygenases might participate in the initial stage of o-tolidine degradation, but later, this process was not dependent on CYP450. In the white rot fungus Phanerochaete chrysosporium cytochrome P450 monooxygenases catalyse the oxidation of phenanthrene 58 and pyrene 59 . The involvement of cytochrome P450 and laccase was studied by Nykiel-Szymańska et al. 60 . They proved that cytochrome P450 and laccase participate in the biotransformation of alachlor by Trichoderma koningii. The elimination of alachlor reached 90% after 72 h of incubation and even 80-60% in the presence of 1-5 mM copper.

Conclusions
The present study revealed the ability of the ascomycete fungus Nectriella pironii originating from an urban postindustrial area to grow and retain metabolic activity in the presence of the dye industry waste. The fungus efficiently removed Acid orange 7 and Reactive Red 120 and hazardous aromatic amine (o-tolidine) used in azo dye production. This study documented for the first time o-tolidine biotransformation by microscopic fungi. Moreover, fungal laccase and cytochrome P450 involvement in this process has been confirmed. Additionally, the decolorization of azo dyes with the addition of heavy metals by N. pironii was studied. The high tolerance of the fungus to the tested hazardous compounds connected with their removal makes it an attractive tool in wastewater treatment plants applied for the elimination of dye industry waste. The presented results may also contribute to a precise understanding of the mechanisms controlling this process and promote the creation of a fungus-based system for the elimination of toxic pollutants from textile industry areas.

Materials and methods
Chemicals and landfill leachate. Experimental setup and design. Fungal growth conditions. Fungal spores from 10-day-old cultures incubated on ZT slants were used for the preparation of pre-cultures in 25 mL of WHI medium 62 using 100-mL Erlenmeyer flasks. The incubation was conducted at 28 °C on a rotary shaker (120 rpm). After 24 h, the precultures were transferred to fresh WHI medium at a ratio of 1:4 and cultivated for 24 h 23 .
Growth of N. pironii in medium with landfill leachates. Landfill leachates were centrifuged (6,000 × g for 10 min at 4 °C) and filtered to remove suspended solids before measurement. The cultures were prepared by inoculating Sabouraud dextrose broth liquid medium (BioMaxima, Poland) with 10, 20 or 40% v/v landfill leachate and 10% v/v inoculum. In addition, control flasks without added landfill leachate were included. All of the experiments were conducted in triplicate. Flasks were incubated on a rotary shaker (120 rpm) at 28 °C for 120 h.
Analytical methods. Dry weight estimation of fungal biomass. The cultures in the flasks were filtered through pre-weighed Whatman filter paper No. 2 on a filtration set under slight vacuum, washed three times with distilled water and then dried at 105 °C in an oven until a constant weight 63 . The difference between the weight of dried filter paper with biomass and empty filter paper represented the fungal biomass. The results are expressed as mg mL -1 , which corresponds to fungal biomass (mg) per volume of culture (mL).

Determination of o-tolidine and its metabolites by HPLC-MS/MS. Measurement was performed
using an Agilent 1200 HPLC (Santa Clara CA, USA) system and a 4500 QTrap mass spectrometer (Sciex, Framingham, MA, USA) with an ESI source. For reversed-phase chromatographic analysis, 10 μl of the diluted sample was injected onto a Kinetex C18 column (50 mm × 2.1 mm, particle size: 5 μm; Phenomenex, Torrance, CA, USA). The mobile phase consisted of 5 mM ammonium formate in water (A) and 5 mM ammonium formate in methanol (B). The solvent gradient was initiated at 20% B, increased to 80% B over 0.5 min, and maintained at 80% B for two additional minutes before returning to the initial solvent composition over 2 min. The column temperature was maintained at 40 °C, and the flow rate was 600 µl min −1 .
The instrumental settings were as follows: spray voltage 5500 V, curtain gas (CUR) 25, nebulizer gas (GS1) 50, turbo gas (GS2) 50, ion source temperature of 500 °C, and positive polarization. Data analysis was performed with Analyst version 1.  Assay of laccase activity and protein concentration. Laccase activity in the centrifuged supernatant was assayed by monitoring the oxidation of 10 mM ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt) at 420 nm, as described previously 23,77 . One unit of laccase activity (U) was determined as the concentration of the enzyme required to oxidize 1 μM substrate per minute.
The protein concentration was determined using a bicinchoninic acid assay (BCA) test according to the Pierce BCA Protein Assay Kit protocol (Thermo Fisher Scientific).
Cytochrome P450 inhibition study. 1-Aminobenzotriazole (ABT)-cytochrome 450 inhibiting compound was introduced to the N. pironii cultures with the addition of o-tolidine (50 mg L -1 ) at the start of the cultivation to obtain a final concentration of 0.25 mM. Control flasks of o-tolidine (without inhibitor) were also prepared. All cultures were incubated on a rotary shaker (120 rpm) at 28 °C. The samples from 24, 72 and 120 h of cultivation were used in the experiment prepared in accordance with the method described in Section "o-tolidine extraction and analysis".
Characterization of the decolorizing potential of the N. pironii strain. Assays for the decolorization of dyes (RO 16, AR 27, RR 120, RB 5 and AO 7) at the initial concentration of 25 mg L -1 were performed in 18 mL of Sabouraud medium and inoculated with 10% inoculum. The cultures were prepared in 100-mL Erlenmeyer flasks and incubated on a rotary shaker (120 rpm) at 28 °C for 5 days. The abiotic controls of dyes and samples tested were carried out in triplicate. One milliliter of culture broth was sampled in an Eppendorf tube, centrifuged at 6,000 × g for 5 min and measured at the dye maximum absorbance wavelength (RO 16 λ max = 492 nm; AR 27 λ max = 529 nm, RR 120 λ max = 516 nm, RB 5 λ max = 598 nm, AO 7 λ max = 467 nm) in a FLU-Ostar microplate reader (BMG Labtech, Germany) and Omega version 5.10 R2 software (https:// www. bmgla btech. com/ micro plate-reader-softw are/) 78 . The percentage decolorization was calculated as Eq. (1): where A 0 is the absorbance of the abiotic control, A t is the absorbance of the culture supernatant, and D is the decolorization rate.
Additionally, the impact on decolorization rate of heavy metal compounds Cr(VI) 0.1 mM, Cd(II) 0.75 mM and Zn(II) 1.75 mM introduced to the N. pironii culture separately or as a mixture was measured as described previously.
Spatial data analysis. Spatial data on the characteristics and field parameters of a landfill were obtained by the method of mapping degraded areas 79 using GIS tools-Quantum GIS Bucuresti version 3.12 geoinformation Statistical analysis. Experiments were conducted in triplicate. The data values are presented as the mean ± standard deviation (SD). The statistical significance of differences between the mean values was compared using an analysis of variance (ANOVA) with Tukey's post hoc test. www.nature.com/scientificreports/ Publisher's note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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