Table 1 Sites under selection by clade. Sites are counted as positive (or negative) if any one of the following tests is significant SLAC ≤ 0.01, FEL ≤ 0.01, MEME ≤ 0.01, FUBAR ≥ 0.99 (equivalent to p-value ≤ 0.05 with Bonferroni correction).

From: The evolution and phylodynamics of serotype A and SAT2 foot-and-mouth disease viruses in endemic regions of Africa

Clade #Pos. Antigenic Region 0.1 Antigenic Region 0.2 Other #Neg. RGD Neg.
SAT2-I 1 176 152 144,145,146
SAT2-IV 3 149 130,217 96 145,146
SAT2-VII 1 161 84 144,146
A-I 1 197 83 146
A-VII 1 198 27
A-IV 2 196 43 69 145,146