Tumour necrosis factor α receptor 1 (TNFR1) activation is known to induce cell death, inflammation, and fibrosis but also hepatocyte survival and regeneration. The multidrug resistance protein 2 knockout (Mdr2−/) mice are a model for chronic hepatitis and inflammation-associated hepatocellular carcinoma (HCC) development. This study analysed how the absence of TNFR1 mediated signalling shapes cytokine and chemokine production, immune cell recruitment and ultimately influences liver injury and fibrotic tissue remodelling in the Mdr2−/− mouse model. We show that Tnfr1−/−/Mdr2−/− mice displayed increased plasma levels of ALT, ALP, and bilirubin as well as a significantly higher collagen content, and markers of fibrosis than Mdr2−/− mice. The expression profile of inflammatory cytokines (Il1b, Il23, Tgfb1, Il17a), chemokines (Ccl2, Cxcl1, Cx3cl1) and chemokine receptors (Ccr6, Cxcr6, Cx3cr1) in livers of Tnfr1−/−/Mdr2−/− mice indicated TH17 cell infiltration. Flow cytometric analysis confirmed that the aggravated tissue injury in Tnfr1−/−/Mdr2−/− mice strongly correlated with increased hepatic recruitment of TH17 cells and enhanced IL-17 production in the injured liver. Moreover, we observed increased hepatic activation of RIPK3 in Tnfr1−/−/Mdr2−/− mice, which was not related to necroptotic cell death. Rather, frequencies of infiltrating CX3CR1+ monocytes increased over time in livers of Tnfr1−/−/Mdr2−/− mice, which expressed significantly higher levels of Ripk3 than those of Mdr2−/− mice. Overall, we conclude that the absence of TNFR1-mediated signalling did not improve the pathological phenotype of Mdr2−/− mice. It instead caused enhanced infiltration of TH17 cells and CX3CR1+ monocytes into the injured tissue, which was accompanied by increased RIPK3 activation and IL-17 production.
Chronic liver disease (CLD) is a major global health burden and cause of 2% (>1*106 annually) of all deaths worldwide (2010)1. In addition, CLD is often the basis for equally lethal secondary pathologies including pulmonary and cardiac manifestations, hepatorenal syndrome and most prominently, hepatocellular carcinoma (HCC)2,3,4. CLD progresses through distinct phases such as initial injury, subsequent inflammation and fibrotic remodelling which over time culminates in irreversible cirrhosis, mostly independent of the cause5. However, the underlying inflammatory and regenerative processes vary, depending on the type of injury and the interplay of cytokines and chemokines with resident as much as recruited immune cell populations, which in turn determine the disease severity and pace of progression. It has been shown that acute and chronic hepatic inflammation, fibrotic tissue remodelling, and potential tumorigenesis is in part promoted by tumour necrosis factor α (TNFα) signalling through TNFα receptor 1 (TNFR1), and to a lesser degree through activation of TNFR26,7 The signalling pathways of both TNF receptors have considerable overlap, with TNFR1 being expressed ubiquitously and responsible for most of the pro-inflammatory, cytotoxic and apoptotic effects of TNFα, while TNFR2 is primarily found on the hematopoietic cell compartment and lacks the intracellular death domain which induces TNFR1-dependent cell death8.
Numerous agents targeting TNFα signalling are currently used for treating patients with a variety of inflammatory pathologies9. While anti-TNFα therapy is considered to be relatively safe, it still renders patients partially immunosuppressed and consequently more susceptible to secondary infections and possibly cancer due to impaired anti-tumour immunity10. Thus, it has been implied, that targeting TNFR1 signalling exclusively, while upholding some of the physiological functions of TNFα signalling through TNFR2, would be a more comprehensive therapeutic approach11,12. In order to investigate the distinct effects of TNFR1 signalling during chronic inflammation, we crossbred multidrug resistance protein 2 knockout (Mdr2−/−) mice with Tnfr1−/− mice, creating double knockout Tnfr1−/−/Mdr2−/− mice. The Mdr2 gene encodes a P-glycoprotein which transports phosphatidylcholine into the bile. In the absence of phosphatidylcholine primary bile salts have increased detergent activity, damaging the membranes of surrounding hepatocytes13. This constant damage leads to the production of pro-inflammatory cytokines, including TNFα, immune cell infiltration into the injured liver, and progressive fibrotic tissue remodelling14,15.
We previously demonstrated that TNFR1 expression depends on the extent of inflammation in the Mdr2−/−model16. Loss or inhibition of TNFR1 has previously been shown to be protective in mouse models of acute liver injury17,18. In contrast, TNFR1 is also known to induce cytoprotective processes, and the complete absence of TNFR1 signalling reduces the hepatic regenerative capacity and pro-survival signalling through diminished activation of NFκB in the injured liver19,20,21. While during tissue injury, an accurate regenerative response is essential to restore tissue integrity, reduced proliferation in a setting of chronic inflammation might prevent tumour development. We established the Tnfr1−/−/Mdr2−/− mouse model in order to determine how TNFR1 shapes the immune response during bile acid-induced CLD and affects overall disease severity and progression.
The absence of TNFR1 increases tissue injury and fibrotic remodelling in the Mdr2 −/− mouse model
In order to evaluate how the absence of TNFR1 signalling during chronic liver inflammation influences tissue injury and subsequent fibrosis in der Mdr2−/− mouse model, we used 12-week-old female mice of the respective genotypes (unless specified otherwise). Female Mdr2−/− mice exhibit an increased pathological phenotype, allowing for a more detailed analysis of the underlying processes22. We chose 12-week-old mice to see both, active inflammation and pronounced fibrosis.
We observed increased tissue injury in Tnfr1−/−/Mdr2−/− mice, defined by increased plasma levels of alanine aminotransferase (ALT) and alkaline phosphatase (ALP) (Fig. 1A,B). Both markers for liver injury were increased in Mdr2−/− mice compared to C57Bl/6 (WT) mice, but still significantly higher in Tnfr1−/−/Mdr2−/− mice, while Tnfr1−/− mice showed no increase of either enzyme. Further evidence of increased cholestatic liver injury in Tnfr1−/−/Mdr2−/− mice were significantly increased plasma levels of bilirubin accompanied with decreased levels of plasma cholesterol in direct comparison to Mdr2−/− mice (Supplementary Fig. 1A,B).
To assess fibrogenesis, we quantified the hepatic collagen content by measuring hydroxyproline in liver tissue samples of the respective genotypes (Fig. 1C). While the hydroxyproline contents of Tnfr1−/− mice were comparable to WT animals, Mdr2−/− mice had significantly increased levels of hydroxyproline compared to the WT mice. Interestingly, the hydroxyproline content of Tnfr1−/−/Mdr2−/− mice was further significantly elevated compared to Mdr2−/− mice. Collagen deposition is the direct result of fibrotic remodelling in response to prolonged tissue injury. In line with that, we observed significantly increased gene expression of various markers of fibrosis, including genes for α-smooth muscle actin (Acta2), collagen type 1 (Col1a1) and type 3 (Col3a1), matrix metalloproteinases (Mmp) 2 and Mmp9 as well as tissue inhibitors of MMPs (Timp) 1 and Timp2 in the livers of Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice (Fig. 1D). The representative Sirius Red stained tissue sections presented in Fig. 1E clearly show that WT and Tnfr1−/− mice displayed healthy liver parenchyma, with red stained collagen deposition restricted to the basement membrane of the vasculature. Mdr2−/− and Tnfr1−/−/Mdr2−/− mice showed, increased Sirius Red positive areas with cholestatic features such as ductular reactions around portal tracts. Overall, we found that the absence of TNFR1 had no beneficial effect on disease pathology, but instead enhanced tissue injury and fibrotic remodelling in the Mdr2−/− mouse model.
The absence of TNFR1 alters the cytokine and chemokine milieu in the injured liver
TNFα mediated signalling is essential for several inflammatory pathways, mediating the production and/or release of multiple cytokines and chemokines23. We therefore asked whether absence of TNFR1 signalling would affect the cytokine response in the chronically inflamed liver. Figure 2A shows that Tnfr1−/−/Mdr2−/− mice have significantly increased hepatic gene expression of Il1b (Il-1β), Il23 (Il-23), Tgb1 (Tgfβ1), and Il7a (Il-17A) compared to Mdr2−/− mice. Furthermore, the expression of the gene (Rorc) encoding for transcription factor RAR-related orphan receptor gamma t (RORγt), was significantly up-regulated in livers of Tnfr1−/−/Mdr2−/− mice compared to all other genotypes. Furthermore, Tnfr1−/−/Mdr2−/− mice expressed high levels of the chemokines CC-chemokine ligand 2 (Ccl2), showed significantly up-regulated hepatic gene expression of C-X-C motif chemokine ligand 1 (Cxcl1), and expressed significantly increased levels of C-C motif chemokine receptor 6 (Ccr6) as well as C-X-C motif chemokine receptor 6 (Cxcr6) compared to WT, Tnfr1−/−, and Mdr2−/− mice (Fig. 2B). Overall, the expression analysis showed that the absence of TNFR1 strongly influenced the cytokine and chemokine milieu in the chronically inflamed liver of the Mdr2−/− background. Considering the cytokine profile presented above including Il-17A as well as increased Rorγt expression indicating the presence of TH17 cells in the liver of Tnfr1−/−/Mdr2−/− mice, we decided to further analyse accumulation of TH17 cells in the liver.
The absence of TNFR1 signalling leads to increased infiltration of TH17 cells into the injured liver
In line with the observation that the absence of TNFR1 leads to an altered microenvironment rich in cytokines and chemokines known to be involved in the recruitment and activation of TH17 cells, flow cytometric analysis revealed an increased frequency of IL-17A-expressing TH17 cells in the livers of Tnfr1−/−/Mdr2−/− mice (Fig. 3A,B, gating strategy in Supplementary Fig. 2A). For WT, Tnfr1−/−, and Mdr2−/− mice, we observed only negligible frequencies of hepatic TH17 cells. Furthermore, ex vivo stimulation of liver derived non-parenchymal cells (NPCs) with phorbol 12-myristate 13-acetate (PMA) & ionomycin revealed that hepatic immune cells derived from Tnfr1−/−/Mdr2−/− mice produced significantly more IL-17A than hepatic NPCs from Mdr2−/− mice (Fig. 3C). While ex vivo IL-17A production by Mdr2−/− NPCs was not associated with the degree of tissue injury, as defined by plasma levels of ALT (Fig. 3D), it was apparent that production of IL-17A in livers of Tnfr1−/−/Mdr2−/− mice, was directly correlated with the extent of tissue damage (Fig. 3E).
TNFR1 ablation has been shown to diminish the regenerative capacity of the liver due to reduced NFκB activity, which leading to reduced levels of IL-6, and consequently to insufficient STAT3 activation20,21. However, IL-17 is also known to be involved in the onset of regeneration by inducing the production of IL-6 and IL-22, both potent inducers of STAT324. In line with that, Legendplex analysis revealed robust IL-6 concentrations in the plasma of Tnfr1−/−/Mdr2−/− mice and significantly higher plasma levels of IL-22 compared to Mdr2−/− mice (Supplementary Fig. 3A). In line with that, several genes encoding for proliferation markers including proliferating cell nuclear antigen (PCNA), Cyclin A2 (CCNA2) and cyclin-dependent kinase 1 (CDK1) were significantly increased in livers of Tnfr1−/−/Mdr2−/− mice (Supplementary Fig. 3B). Since Mdr2−/− mice are a mouse model of inflammation induced tumour development, and IL-17 has been closely associated with strong induction of regeneration and angiogenesis in the tumour microenvironment, we analysed the gene expression of known HCC tumour markers in Tnfr1−/−/Mdr2−/− mice25,26. We observed up-regulated gene expression of tumour markers including tumour necrosis factor α induced protein (Tnfaip; A20), secreted phospho protein 1 (Ssp1, OPN) and α-feto protein (Afp) (Supplementary Fig. 3C) in 12-week-old Tnfr1−/−/Mdr2−/− mice27,28. Overall, we observed that TH17 cells and their signature cytokines are increased in the injured livers of Tnfr1−/−/Mdr2−/− mice (Fig. 3), while hepatic gene expression of markers of regeneration and possibly tumour development appeared to be rather activated rather than impaired in the absence of TNFR1 (Supplementary Fig. 3).
The absence of TNFR1 leads to necroptosis-independent activation of RIPK3 in the chronically inflamed liver
TNFR1 contains an intracellular death domain which can induce several forms of cell death including apoptosis and necroptosis23. Therefore, reduced cell death in the livers of Tnfr1−/−/Mdr2−/− compared to Mdr2−/− mice had to be expected. As our data indicated the opposite effect, we analysed apoptotic cell death by measurement of activated caspase-3 (western blot), but failed to observe significant differences between Mdr2−/− and Tnfr1−/−/Mdr2−/− mice (data not shown). We investigated gene expression levels of the known mediators of necroptosis, namely receptor interacting protein kinase 1 (Ripk1) and 3 (Ripk3). While Ripk1 was slightly elevated in Tnfr1−/−/Mdr2−/− mice, a significant increase of hepatic Ripk3 expression was observed in Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice (Fig. 4A). Necroptosis is mediated by the necrosome, a cytosolic complex consisting of RIPK1, RIPK3 and the mixed lineage kinase domain like pseudokinase (MLKL). We performed western blot analysis of phosphorylated RIPK3 and MLKL in order to investigate their activation state in the injured liver. We demonstrated increased RIPK3 activation in livers of Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice (Fig. 4B). However, the opposite effect was observed for phosphorylated MLKL (Fig. 4B). Since MLKL is indispensable for necroptosis, these findings suggest a necroptosis-independent role of RIPK3 during chronic liver injury in the absence of TNFR1. Morriwaki et al. were among the first to describe a necroptosis-independent function of RIPK3 by showing that RIPK3 activity is involved in cytokine production in a CX3CR1+ monocytic cell population29. Gene expression analysis revealed increased Cx3cr1 and Cx3cl1 expression in livers of Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice (Fig. 4C). Correlation analysis showed that animals in which hepatic Ripk3 expression was increased also expressed higher levels of the chemokine receptor Cx3cr1 (Fig. 4D). In order to further investigate a possible role of RIPK3 activity in the monocytic cell compartment, we sorted hepatic CD11b+CX3CR1+ as well as CD11b+CX3CR1− monocytes and analysed Ripk3 expression by qRT-PCR. Although no differences in the hepatic frequencies of both cell populations were observed in 12-week-old Tnfr1−/−/Mdr2−/− mice and Mdr2−/− mice (Fig. 4E,F, gating strategy in Supplementary Fig. 2B), we detected significantly increased expression of Ripk3 in CD11b+CX3CR1+ monocytes derived from livers of Tnfr1−/−/Mdr2−/− compared to those derived from Mdr2−/− mice (Fig. 4G). These results implicate that the absence of TNFR1 mediated signalling leads to increased Ripk3 expression in CX3CR1+ monocytes, and to an overall induction of RIPK3 activity in the chronically inflamed livers in the Mdr2−/− background, which is not associated with necroptotic cell death.
CX3CR1+ monocytes and TH17 cells accumulate in livers of Tnfr1 −/− /Mdr2 −/− mice over time
While Ripk3 expression was increased in hepatic CD11b+CX3CR1+ monocytes of 12-week-old Tnfr1−/−/Mdr2−/− mice, we did not determine increased amounts of these cells at that age. In order to rule out time-dependent effects, we also analysed CD11b+CX3CR1+ cells in livers of 24-week-old Mdr2−/− and Tnfr1−/−/Mdr2−/− mice via flow cytometry. Here observed an increased frequency of CD11b+CX3CR1+ monocytes in livers of Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice (Fig. 5A,B, gating strategy in Supplementary Fig. 2C). In addition, over time the TH17 cell population equally increased in Tnfr1−/−/Mdr2−/− mice, and much less in Mdr2−/− mice (Fig. 5C,D). In summary, the differences in the hepatic immune cell composition of Tnfr1−/−/Mdr2−/− versus Mdr2−/− mice became increasingly apparent over time.
Chronic inflammation of the liver, mostly independent of the underlying pathology, has several major consequences including cirrhosis, liver failure and HCC development4. Therefore, the search for treatment options that specifically suppress pathological inflammatory processes, while retaining the physiological immune surveillance, continues. Numerous studies have shown that specific ablation of TNFR1 has beneficial effects on epithelial cell death, inflammation and fibrosis in acute and chronic hepatitis6,7,17. These results imply that specifically targeting of TNFR1 may be more favourable compared to targeting total TNFα-mediated signalling. However, multiple studies also showed that TNFα-mediated signalling via TNFR1 is critical for hepatocyte proliferation and regeneration20,21. Furthermore, preconditioning with TNFα has proven to be protective against ischemia/reperfusion injury30. The collective data presented in this study clearly demonstrate that the constitutive ablation of TNFR1 in a mouse model of chronic liver inflammation does not improve the pathological phenotype. Instead, elevated plasma levels of ALT and ALP combined with a higher hepatic collagen content clearly showed increased tissue injury and fibrogenesis in Tnfr1−/−/Mdr2−/− mice compared to the Mdr2−/− mice. Due to the complete absence of phospholipids in bile, tissue injury in the Mdr2−/− mouse model is in part driven by progressive cholestasis and impaired cholesterol excretion14. Increased levels of plasma bilirubin accompanied with a decreased cholesterol output observed in Tnfr1−/−/Mdr2−/− mice indicated a manifestation of cholestatic features in the absence of TNFR1. Subsequent analysis revealed distinct differences in the pathology of Tnfr1−/−/Mdr2−/− and Mdr2−/− mice on cellular and molecular level.
First, the divergent cytokine and chemokine profiles in livers of both mouse lines should be noted. Elevated hepatic gene expression levels of Il-1β, Il-23, Tgfβ1, Il-17A, and Rorc in Tnfr1−/−/Mdr2−/− mice implied TH17 cell accumulation in the inflamed liver, which was later confirmed via flow cytometry. The roles of IL-1β and TGFβ1 in TH17 cell differentiation have been described extensively in vitro and in vivo31,32. IL-23 mediated signalling has been shown to be essential for stabilizing TH17 cell gene signature (Rorγt, IL-17A), down-regulation of repressive factors (Il2, Il12) and the induction of TH17 cell pathogenicity33. Tnfr1−/−/Mdr2−/− mice showed up-regulated gene expression of several chemokines and chemokine receptors involved in TH17 cell recruitment including Ccl2, Ccr6, and Cxcr634,35,36,37.
In addition, we observed increased hepatic expression of Cx3cr1 in livers of Tnfr1−/−/Mdr2−/− mice which was proportional to the increased hepatic gene expression of Ripk3. CX3CR1/L1 is known especially for its role in the recruitment of leucocytes including macrophages and T cell subsets38. While direct recruitment of TH17 cells via CX3CR1 has not been reported, TH17 cells are diminished in Cx3cr1−/− mice, used in a model of collagen induced arthritis39, and T cell specific CX3CR1 deficiency reduced TH17 cell polarization and impaired IL-17A production in vitro40. We therefore speculate that the increased TH17 response observed in livers of Tnfr1−/−/Mdr2−/− mice is associated with the observed increase of Cx3cr1 gene expression and accumulation of CX3CR1+ monocytes over time. This assumption is supported by the fact that CX3CR1+ monocytes are essential for the induction of commensal-specific TH17 cells in the gut41, the primary site where the TH17 cell response is controlled42. An increasing body of evidence further emphasizes the role of the gut-liver axis in a variety of inflammatory hepatic pathologies, including primary sclerosing cholangitis (PSC), a chronic cholestatic liver disease for which Mdr2−/− mice are used as a disease model43,44,45. Eighty percent of PSC patients also suffer from inflammatory bowel disease (IBD), and recent reports have shown that Mdr2−/− mice display increased gut permeability and sensitivity to dysbiosis46,47. Interestingly our data showed that in the absence of TNFR1 CD11b+CX3CR1+ monocytes express higher levels of Ripk3, which is concomitant with an overall increase of hepatic RIPK3 activation in Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− mice. Previous reports showed that RIPK3 has necroptosis-independent immune modulatory functions in gut derived monocytes. Moriwaki et al. demonstrated that RIPK3 mediates injury-induced production of IL-1β and IL-23 in a CX3CR1+ monocytic population during dextran sulfate sodium induced colitis29. Moreover, they showed that RIPK3 is essential for initiating tissue repair via induction of IL-22. This is in line with our observation of significantly increased plasma levels of IL-22 in Tnfr1−/−/Mdr2−/− mice and robust expression of several markers of regeneration such as Pcna, Ccna2, and Cdk1. This finding is in contrast to previous reports showing that TNFR1 is essential for successful initiation of liver regeneration, via the NFκB, IL-6, STAT3 axis21. However, TH17 cells are known to produce high levels of IL-22 whereas IL-17 has been shown to induce IL-6 production via multiple pathways including AKT and NFκB activation48,49,50. In line with that, we did not observe significantly reduced plasma levels of IL-6 in Tnfr1−/−/Mdr2−/− mice. We therefore hypothesize that hepatic regeneration of Tnfr1−/−/Mdr2−/− mice may be maintained by the increased numbers of TH17 cells and their production of IL-17A and IL-22 in the injured liver of Tnfr1−/−/Mdr2−/− mice. While compensatory proliferation during chronic tissue injury is essential to retain tissue integrity, it is also the basis for tumour development51. It has to be noted that none of the animals used in this study showed macro- or microscopic signs of tumorous tissue, neither at 12- nor at 24-weeks of age. However, we analysed the hepatic expression of genes known to be up-regulated in HCCs and found that Tnfr1−/−/Mdr2−/− mice expressed significantly more A20, OPN, and Afp than Mdr2−/− mice27,28,52. Considering that Tnfr1−/−/Mdr2−/− mice displayed a more severe pathology and active proliferation, we speculate that during chronic liver inflammation ablation of TNFR1 has rather a detrimental than a beneficial effect on tumour development. Overall, we conclude that the absence of TNFR1 signalling exacerbates the pathological phenotype of Mdr2−/− mice, demonstrated by increased liver injury presumably due to increased IL-17A mediated signalling. Moreover, the increased disease severity in Tnfr1−/−/Mdr2−/− mice compared to Mdr2−/− is associated with a divergent cytokine and chemokine milieu which consequently leads to an altered immune cell composition enriched in TH17 cells and increased recruitment of CX3CR1+ monocytes over time. This study implies several interesting paths for future research, including a closer look on the role of TNFR1 on cellular and microbial homeostasis in the gut, the organ responsible for TH17 cell priming. It would further be of high interest to further elucidate the interplay of TNFR1 and RIPK3, and how targeted neutralization of one of the signalling molecules shaped immune modulatory functions of the other.
Material and Methods
For the phenotypical analysis of Tnfr1−/−/Mdr2−/−mice, a C57/BL6 background was chosen. The Mdr2−/− (C57BL/6.129P2-Abcb4tm1Bor) mice were kindly provided by Daniel Goldenberg (Jerusalem, Israel). The Tnfr1−/− (C57BL/6-Tnfrsf1atm1Imx/J) mice were kindly provided by Volker Vielhauer (Munich, Germany). The Tnfr1−/−/Mdr2−/− mice were generated by cross-breeding of homozygous specimen of the single knockouts. Successful knockout was confirmed via PCR analysis of DNA isolated from tail biopsies. All mice received human care according to the FELASA guidelines implemented by National Institutes of Health. All mice received care according to the FELASA guidelines. The animal protocols were approved by the Hamburg Federal Authority for Health and Environment and are in accordance with the legal and ethical requirements in Germany. Mice were housed in IVC cages under controlled conditions (22 °C, 55% humidity, and 12-hour day-night rhythm) and fed a standard laboratory chow (LASvendi, Soest; Altromin, Lage, Germany).
Determination of plasma enzymes and cytokines
Liver damage was assessed by measuring plasma enzyme activity of alanine aminotransferase (ALT) and alkaline phosphatase (ALP) as described previously16. Plasma levels of IL-6 and -22 were determined via Legendplex (Biolegend, San Diego, CA) according to manufacturer’s instruction.
Assays were performed as described previously53.
Sirius Red staining was as described previous54. Images were taken with a BZ-9000 microscope (Keyence, Osaka, Japan). Sirius Red positive areas were quantified with BZ-II Analyzer software (Keyence, Osaka, Japan).
Immune cell composition was determined via flow cytometry. Cells were analysed with LSRFortessa (BD bioscience, Franklin Lake, NJ). Obtained data were interpreted using FlowJo (BD bioscience, Franklin Lake, NJ) software. Antibodies are summarized in Table 1. The gating strategy for identifying the different hepatic immune cell subsets is depicted in Supplementary Fig. 2A,C.
Fluorescence-activated cell sorting
A single cell suspension of hepatic NPCs was generated using standard laboratory techniques. Cells were stained with an antibody cocktail described in Table 1B. CD11b+CX3CR1+ and CD11b+CX3CR1− were sorted with a FACSAria III cell sorter (BD bioscience, Franklin Lake, NJ) using FACSDiva software (BD bioscience, Franklin Lake, NJ). The gating strategy is depicted in Supplementary Fig. 2B.
Ex vivo re-stimulation of hepatic non-parenchymal cells NPCs and determination of cytokine production
Isolated NPCs from the liver, were re-stimulated with phorbol-12-myristate-13-acetate (PMA) (50 ng/ml) and ionomycin (1 µg/ml) for 4 h at 37 °C. Supernatant was collected and stored at −20 °C. Cytokines were quantified with Legendplex (Biolegend, San Diego, CA) according to manufacturer’s instruction. For analysis of TH17 cells via flow cytometry, brefeldin A (50 ng/ml) and monensin (1 µg/ml) were added for intracellular cytokine accumulation.
Detection of messenger RNA by quantitative real-time reverse transcriptase polymerase chain reaction (RT-qPCR)
Isolation of total RNA, complementary DNA synthesis, and RT-qPCR were performed as described previously16. Oligonucleotides were obtained from Metabion International AG (Steinkirchen, Germany) and are summarized in Table 2.
Protein isolation from mouse liver and western blot analysis
Tissue lysates were prepared as described previously16. Semi-quantitative evaluations were performed using VersaDoc M Imaging System, 4000 MP (Bio-Rad, Hercules, CA). Antibodies are summarized in Table 1.
Statistical analyses were performed using graphpad prism 7 software (GraphPad Software, La Jolla, CA). All data are presented as mean ± SEM. For comparisons between 2 groups either a students’s t-test or when applicable a non-parametric Mann-Whitney test were used. For comparisons of more than 2 groups a one-way ANOVA with Tukey’s post-hoc test was used. Correlation between 2 parameters were determined via Spearman non-parametric correlation test. Outliers were identified applying the ROUT method. *P ≤ 0.05, **P ≤ 0.01, ***P ≤ 0.001, ****P ≤ 0.0001. Asterisks above columns represent significance of the difference compared to WT.
The datasets generated during and/or analysed during the current study are available from the corresponding author on reasonable request.
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We thank Elena Tasika and Carsten Rothkegel for excellent technical assistance and further the co-workers of the FACS Core Unit at the University Medical Centre Hamburg-Eppendorf for their support. This work was supported by the Deutsche Forschungsgemeinschaft (DFG): Collaborative Research Centre 841 project C2 to R.B. and G.T., project B1 and SFB 841 graduate school to G.T., and Clinical Research Unit 306, project 4 to R.B. and G.T.