Disease severity enhancement by an esterase from non-phytopathogenic yeast Pseudozyma antarctica and its potential as adjuvant for biocontrol agents

The phylloplane yeast Pseudozyma antarctica secretes an esterase, named PaE, and xylanase when cultivated with xylose. We previously observed that the lipophilic layer of Micro-Tom tomato leaves became thinner after the culture filtrate treatment. The leaves developed reduced water-holding ability and became wilted. In this study, the purified enzymes were spotted on Micro-Tom leaves. PaE, but not xylanase, thinned the lipophilic layer of leaves and decreased leaf resistance to the phytopathogenic fungus Botrytis cinerea. Disease severity increased significantly in detached leaves and potted plants treated with the culture filtrate and B. cinerea spores compared with those treated with inactivated enzyme and B. cinerea alone. Spore germination ratios, numbers of penetrating fungal hyphae in the leaves, and fungal DNA contents also increased significantly on the detached leaves. Japanese knotweed (Fallopia japonica), a serious invasive alien weed in Europe and North America, also became susceptible to infection by the rust pathogen Puccinia polygoni-amphibii var. tovariae following the culture filtrate treatment. The culture filtrate treatment increased disease development in plants induced by both phytopathogenic fungi. Our results suggest that P. antarctica culture filtrate could be used as an adjuvant for sustainable biological weed control using phytopathogenic fungi.

Plants are exposed to various environmental stresses including infection by pathogenic microorganisms. The lipophilic layer covering the surface of plants functions primarily as a physical barrier to infection 1 . The cuticle is composed of a top wax coating and a lower lipophilic polymer layer (crosswise esterified hydroxy fatty acids) that blends with the cell wall substances 2 . Because the cuticle layers also prevent the passive diffusion of nutrients and water vapor from the plant interior onto the surface, it is thought plant-associated microorganisms have limited access to nutrients 3 . Various plant-associated yeasts can secrete a variety of hydrolytic enzymes. These enzymes have been suggested to enhance the capacity of the phylloplane yeasts to extract nutrients from plants, however, little evidence of this phenomenon has been reported.
The basidiomycete yeasts Pseudozyma often isolated from healthy leaf surfaces are recognized as non-pathogenic residents. Pseudozyma antarctica secretes a 20.4-kDa esterase named PaE, which shares 61% identity with a cutinase-like enzyme from the yeast Cryptococcus sp. strain S-2 (AB102945) 4 . These two enzymes have wide spectra of activities with various lengths of fatty acid esters and aliphatic polyester films that are used as biodegradable plastics (BPs) 5,6 . The enzymes share roughly 19% similarity with the cutinases of filamentous fungi, which have catalytic activity mainly on short-chain fatty acids and lower specificity for BPs 7,8 . However, the biological function of PaE on leaves has not been elucidated.

Effect of purified enzyme on detached Micro-Tom leaves.
Previous studies have shown that the lipophilic layer covering the aerial epidermis of leaves became thinner following crude enzyme treatment 7 . PaE and xylanase 11,23 , the major protein components of the crude enzyme solution, were isolated ( Figure S1). Droplets of the each purified enzyme solution and control samples were spotted on the detached Micro-Tom leaves separately. To clarify the effect of enzyme treatment on the lipophilic layer of leaves, the thickness of the lipophilic layer was measured on a cross-sectional view of leaf surfaces under a light microscope after staining the lipophilic layer with Sudan III ( Figure S2). The lipophilic layer was found to have been significantly thinned by treatment of either enzyme solution that contained active PaE (crude enzyme solution, purified PaE, and enzyme mixture of purified PaE and xylanase). In contrast, the lipophilic layer of samples treated separately with inactivated enzyme solution, and purified xylanase looks the same as that of samples treated with sterilized distilled water (SDW) (control) (Fig. 1). These results indicated that PaE in crude enzyme solution but not xylanase has significant activity for thinning the lipophilic layer of plant surface. Based on SDS-PAGE analysis, the crude enzyme solution contains relatively smaller amount of two esterases (lipases A and B) compared to PaE and xylanase 10

Susceptibility to pathogens of enzyme-treated detached Micro-Tom leaves.
Considering that the cuticle serves as a physical barrier against pathogen invasion 25,26 , treatment with the crude enzyme solution was expected to influence plant susceptibility to pathogens. To confirm this expectation, spore suspension of a gray mold (B. cinerea), which is one of the serious pathogens of tomatoes, were inoculated over the enzyme-spotted area on leaves (Fig. 2). On the leaves pre-treated with PaE containing solution (PaE only, and PaE + xylanase), disease symptoms (black spots) were developed within 7 days after treatment with B. cinerea spores. In contrast, no symptoms were observed on the leaves pre-treated with xylanase only. The purified PaE and crude enzyme solution showed similar lipolytic layer-thinning effect and enhance the pathogen infectivity of treated leaves. These results indicated that main cause of the disease in the crude enzyme solution is the PaE. Therefore, we used the crude enzyme solution in subsequent large scale study.
Disease severity in crude enzyme-treated Micro-Tom detached leaves following inoculation with B. cinerea spores. To analyze the effect of crude enzyme treatment on pathogen infectivity on Micro-Tom detached leaves, B. cinerea spores were inoculated onto Micro-Tom detached leaves at 3 days after crude enzyme treatment. Crude enzyme treatment significantly enhanced chlorotic symptoms in leaves (Fig. 3A) and disease severity [the visual disease symptom scoring system recommended by Japan Plant Protection Association (JPPA)] (Fig. 3B) at 7 dpi (in total, 10 days after crude enzyme treatment) versus those treated with fungal spores alone and those treated with inactivated enzyme. There was no statistically significant difference in disease severity between the leaves treated with inactivated enzyme solution and B. cinerea compared and those with B. cinerea alone.

Spore germination and fungal invasion in crude enzyme-treated Micro-Tom leaves.
We observed the development of B. cinerea spores on detached Micro-Tom leaves under the light microscope at 2 dpi (Fig. 4). B. cinerea spores inoculated onto crude enzyme pretreated leaves gave a significantly higher germination ratio than that of B. cinerea only treatment (Fig. 4). Their germ tubes were elongated and their hyphae were spread over the leaves ( Figure S3). In contrast, the leaves inoculated with B. cinerea alone and those treated with inactivated enzyme and fungus treatment showed no difference in the ratio of germinated spores (Fig. 4). Moreover, the germ tubes of most spores in both treatments did not elongate well.
The penetration of B. cinerea hyphae into the leaves at 3 dpi was confirmed in a double stained cross-sectional image (Fig. 5) and was quantified fungal DNA (Fig. 6). Vigorously growing hyphae were observed in the tissue on the leaves treated with crude enzyme solution (Fig. 5B). Germinated spores adhered on the leaves treated with inactivated enzyme solution, but the elongated germ tubes did not penetrate into the plant tissue (Fig. 5A). The amount of the fungal DNA on the detached leaves was quantified based on the relative content of B. cinerea β-tubulin and Micro-Tom actin DNA per given area. The content of fungal DNA was significantly higher after crude enzyme treatment compared with the leaves with no pre-treatment and with inactivated enzyme treatment (Fig. 6).   Effect of crude enzyme treatment on the infectivity of P. polygoni-amphibii var. tovariae on F. japonica plants. Our results as described above suggested the possibility that crude enzyme treatment could be utilized to enhance infection by Puccinia in Japanese knotweed. To assess the feasibility of employing crude enzyme solution as adjuvant for biological control agent, a preliminary experiment was conducted wherein Japanese knotweed was treated with crude enzyme solution prior to inoculation of Puccinia spores in a manner, similar to the above investigations. The results were presented in Fig. S4. They showed that in the Japanese knotweed plants pre-treated with crude enzyme solution, some leaves were defoliated even at 0 dpi. Furthermore, the leaves were also damaged similar to our previously reported finding that the crude enzyme treated Micro-Tom potted plants lost most of their leaves and became wilted 10 . Actually, rust symptoms appeared at 3 dpi, which was faster than in plants with no enzyme treatment (control). Crude enzyme treatment significantly promoted disease development at 3 and 6 dpi compared with the control treatment ( Figure S4A). The percentage of leaf defoliation increased significantly at 6 and 9 dpi compared with that of plants inoculated with Puccinia alone ( Figure S4B). For the practical application of the crude enzyme for the biological control of Japanese knotweed, the effects of simultaneous treatment with crude enzyme solution and Puccinia spores were determined. With coinoculation  The ratios of B. cinerea β-tubulin to Micro-Tom SlACT were evaluated. All data represent mean ± SE of the mean of replicates n = 5 (spore only) and n = 6 (inactivated or crude enzyme with spores). Asterisks (* and **) indicate significant differences at P < 0.05 and P < 0.01, respectively (one-way ANOVA, Dunnett's test). treatments, application of crude enzyme solution promoted disease development significantly at 6, 9, and 12 dpi compared with the control treatment (inactivated enzyme + Puccinia). Severe symptoms were also observed on leaves inoculated with crude enzyme solution with Puccinia spores but not on those treated with inactivated enzyme + Puccinia. Although disease development at 3 dpi did not differ significantly between treatments of crude enzyme solution with Puccinia and the inactivated enzyme + Puccinia, more symptoms did appear on the inoculated leaves with the former treatment than on those with the latter (Fig. 8A). Furthermore, defoliated leaves were observed at 3 dpi in the plants coinoculated with crude enzyme solution and Puccinia. The percentages of leaf defoliation at 3 and 6 dpi with crude enzyme solution with Puccinia were higher than with fungus treatment alone, although the differences were not statistically significant (Fig. 8B).

Discussion
In this study, we showed that concentrated PaE, an esterase of the phylloplane yeast P. antarctica, thinned the lipophilic layer of tomato leaves and decreased the leaves' protection against the plant pathogenic fungus B. cinerea. Treatment with a PaE-containing culture filtrate (crude enzyme solution) also increased disease development caused by B. cinerea on tomato plants. We obtained similar results using crude enzyme solution with the rust pathogen Puccinia on F. japonica plants, one of the most serious invasive alien weeds in Europe and North America. Leaf surfaces are an important habitat for microorganisms but provide limited nutrient resources 3 . On leaf surfaces, these phylloplane yeasts may secrete esterases to extract fatty acids, the major component of the leaf lipophilic layer 12,13 , and assimilate them as carbon source. Based on the affinity of polyclonal antibodies against PaE, we observed that Pseudozyma sp. yeasts isolated from vegetable leaves also secrete esterases with high PaE similarity 27 . Previously, we observed that treatment with the crude enzyme thinned the cuticle layer covering the aerial epidermis of leaves 10 . Our crude enzyme solution contained a large amount of PaE and xylanase 11 . Here, we applied purified PaE or a mixture of PaE and xylanase to leaves in the same amounts as contained in crude enzyme solution, and observed that treatments with the solution containing PaE made the cuticle layer thinner, whereas the solution without PaE produced no such effect (Fig. 1). The basidiomycetous yeast Cryptococcus species are also often isolated from plant surfaces. C. flavus and C. magnus related yeast also secrete about 20 kDa esterases (CfCLE, CmCut1) with 61.0% and 57.3% amino acid sequences identity with PaE, respectively, their BPs degrading activity has been previously reported 6,24 . It indicates that this kind of activity is in general commonly found in cutinase-like enzymes of these yeasts. However, these phylloplane yeasts do not increase disease severity on leaves. In most of leaves, Pseudozyma and Cryptococcus are found in low populations, which suggests that these phylloplane yeasts secrete small amounts of esterases and utilize small amounts of plant cuticle as nutrients.
The cuticle layer has a role in protecting plants from pathogen invasion as well as acting as a water barrier [28][29][30][31] . In an SlSHIN3-silenced tomato plant line, loss of function of the transcription factor in regulating cuticle formation and epidermal patterning markedly reduced the thickness of the cuticle layer and increased sensitivity to B. cinerea infection versus the wild-type plant 32,33 . Similarly, treatment with a solution including PaE reduced the thickness of cuticle layer, and B. cinerea infection in tomato leaves was enhanced (Figs 2,3 and 7). Because degradation products from the cuticle layer such as cutin monomers induce germination and appressorium formation in phytopathogenic fungi 34 , products released from leaves due to PaE treatment may have triggered the infection structure development of spore (Figs 4-6).
On the leaves treated with inactivated enzyme solution, B. cinerea infection was enhanced compared to that of B. cinerea only. The result implies that the crude enzyme treatment compromises the surface barrier of plants against pathogens, leading to enhanced disease development. In addition, we consider that this result could have been due to the induction of fungal growth by residual nutrients derived from P. antarctica culture medium. It is well known that P. antarctica has ability to secrete mannosylerythritol lipids that can decrease the contact angle of water droplets and the spreading of microbial cells onto plant surface 35 . It might be possible that these extra components in the PaE active/inactivated crude enzyme solutions also contributed to the enhancement of B. cinerea infection on the leaves. Furthermore, the results of the experiment where a high concentration of purified Cryptococcus CmCut1 was applied on Micro-Tom leaves also enhanced B. cinerea infection ( Figure S5). It is considered that the phenomenon is common for this type of enzymes.
During the plant infection process, B. cinerea penetrates the cuticle through enzymatic degradation 36 . Because B. cinerea secretes cutinases, pectin-degrading enzymes, proteases, and laccases on tomato peels 20,37,38 , Suarez et al. 36 and Cotoras and Silva 37 considered that these enzymes contribute to successful infection. In this study, B. cinerea easily invaded leaves with damaged cuticles; the enzyme secretion stage of the fungus may not have been required.
Our results indicate that the activity of PaE contained in the culture filtrate was responsible for the adjuvant effect of the culture filtrate on fungal infection.
Invasive alien weeds have the potential to spread uncontrolled if no specialized natural enemies are present 39 . Biological control methods have been devised to suppress the propagation of alien weeds. However, biocontrol agent candidates including Puccinia, are sometimes not sufficiently damaging to their hosts when applied in the field. We suggested that the method used to support infection in this study would enhance the effectiveness of the biocontrol agents. Based on the observed effect that PaE treatment thinning the plant cuticle layer, we predict that the crude enzyme treatment would improve the weed infectivity of biocontrol agents and boost weed control efficacy. We conducted, therefore, a preliminary investigation to determine the potential of a crude enzyme  Figure S4). To explore practical, labor-saving applications of this treatment, we examined simultaneous treatment with crude enzyme solution and Puccinia spores, and obtained similar results (Fig. 8). These results indicated that the thinning of the physical barrier of the plant surface by crude enzyme treatment enhanced successful infection in target plants before inoculation or during infection. The rapid propagation of the rust fungus on the inoculated area can be expected to lead to significant control of F. japonica plants in the introduced range. However, further laboratory and also field studies are needed to demonstrate the feasibility of utilizing crude enzyme as an effective adjuvant for biological control. In addition, it would be valuable to test this approach with other weed-biocontrol agent systems.

Materials and Methods
Microorganisms. The strain P. antarctica GB-4(0)-HPM7, stocked in the NARO Genebank as MAFF 30700 10 was used for production of crude enzyme solution, and preparation of purified xylanase. For preparation of purified PaE, genetically modified strain, P. antarctica GB-4(0)-X14, that harbors PaE gene (PaCLE1) under the control of strong xylanase promoter (upstream of PaXYN1) 23 was used.
Botrytis cinerea MAFF 305929, that causes gray mold disease of Solanum lycopersicum, was obtained from the NARO Genebank (Japan). The strain was grown on potato dextrose agar (PDA) medium (Becton, Dickinson, Sparks, MD) at 18 °C for 2 weeks.
Leaf samples of F. japonica with disease symptoms of the rust fungus, P. polygoni-amphibii var. tovariae 15 (Puccinia) were collected from a field (Kyushu University, Fukuoka, Japan). The urediniospores mixed with talcum powder (spores:talc = 1:10, w/w) were applied to both leaf surfaces using a fine brush and inoculated plants were kept in a dew chamber with a relative humidity (RH) of 100% at 20 °C without light and incubated for 48 h and then transferred to a glasshouse. After urediniospores matured on the inoculated leaves, they were collected by tapping the leaves and used as the inoculum. The inoculum was kept in the refrigerator before use. In each experiment, the same inoculum was used. Rhizomes of Japanese knotweed collected from natural populations growing at Omura, Nagasaki Pref., Japan, were sown in commercial soil (Kenbyo, Yae Nogei Co., Ltd., Nagasaki, Japan) in pots and maintained in a glasshouse at 25 °C under natural light conditions.

Preparation of crude enzyme solution of the yeast P. antarctica. The strain P. antarctica
GB-4(0)-HPM7 was cultivated in a jar fermentor with 72-h xylose-fed batch cultivation as described previously 9 . These culture conditions are suitable for P. antarctica to produce high amount of an esterase (PaE) and xylanase 11 . Crude enzyme solution was prepared by filtration of the culture supernatant using cellulose acetate membrane (pore size 0.45 μm, Toyo Roshi Kaisha, Tokyo, Japan).

Preparation of purified PaE and xylanase.
High concentration of PaE was produced by xylose fed batch cultivation of P. antarctica GB-4(0)-X14 23 . PaE was purified from the culture filtrate without concentration by the affinity chromatography using poly(butylene succinate-co-adipate) (PBSA) (Bionolle EM-301, average molecular weight 12-15 × 10 4 ; Showa Denko K. K., Tokyo, Japan) as carrier, which was developed previously 24 . The purification of xylanase was performed from culture filtrate of P. antarctica GB-4(0)-HPM7 (crude enzyme solution) as follows: the crude enzyme solution was passed through a Mono Q HR 5/5 column (GE Healthcare Life Science, Little Chalfont, UK), and the flow-through fraction was concentrated 24 times by ultrafiltration. The filtrate (100 μl) was mixed with 900 μl of 50 mM Na-phosphate buffer (pH 7.1) containing 1.3 M ammonium sulfate. The mixture (1 ml) was applied to a Phenyl Superose HR 5/5 column (GE Healthcare Life Science). The xylanase was isolated in a fraction of a linear gradient (1.2-0 M) of ammonium sulfate in 50 mM sodium phosphate buffer (pH 7.1) as described previously 11 . Enzyme activity. Since PaE was first isolated and identified as BPs degrading enzymes, PaE activity was evaluated based on the decrease in turbidity of emulsified PBSA as described previously 27 . One unit of the PBSA-degrading activity was defined as a 1 OD 660 decrease per min in 20 mM Tris-HCl buffer (pH 6.8) at 30 °C.
The xylanase activity was determined using xylan from birch wood as the substrate, and after the reaction, the amount of reducing sugar released was analyzed by modified Somogyi-Nelson method 11,40,41 . One unit of xylanase activity was defined as 1 µmol of D -xylose liberated per min in the 15 mM phosphate buffer (pH 7.1) at 30 °C.

Treatment of tomato plants and leaves with enzyme solution.
PaE shows a relatively high PBSA degradation activity under alkaline conditions.
The crude enzyme solution was adjusted to 8 U of PaE activity by dilution with 20 mM Tris-HCl buffer (pH 8.8) just before use (generally, the final buffer concentration was 2.22 mM). Under this condition, the crude enzyme solution had 58 U of xylanase activity. Purified PaE and xylanase were adjusted to 8 U and 58 U solutions, respectively, using 20 mM Tris-HCl buffer (pH 8.8). Under at pH 8.8, the activity of PaE has about 4 times of the pH 6.8, and the activity of xylanase has about 70% of the one at pH 7.1. Mixture of PaE and xylanase was also prepared in the same buffer. The crude enzyme solution was heated at 121 °C for 15 min, and after confirming lost the PaE activity, it was used as the inactivated enzyme solution. Inactivated enzyme solution, diluted buffer and SDW were used as control of each experiment. About 600 µl of crude enzyme solution or inactivated enzyme solution per leaf was sprayed over the upper side using pump sprayer. The potted Micro-Tom plants which resulting in a total of 10 ml of solution sprayed were incubated in a glasshouse at an average temperature of 25 °C at 40-50% RH for 3days. The detached Micro-Tom leaves were kept at 25 °C under high humidity conditions in closed containers for 3 days.
The incubated samples were subsequently inoculated with B. cinerea spores.
Thickness measurement of lipophilic layer of enzyme-treated leaves. Three days after treatment of the purified enzyme solution, leaves were cut into 1 cm × 1 cm fragments. The piece of leaf was held between slit of pith and sectioned by razor manually. The lipophilic layer of the leaf was stained with Sudan III (Sigma-Aldrich) according to Buda et al. 42 with some modifications as follows: Leaf sections were soaked in the filtered Sudan III solution (2% w/v in 70% ethanol) for 8 min and were then rinsed first with 50% ethanol, followed by distilled water twice. Stained sections were mounted and observed under an ECLIPSE Ni light microscope with DS-Fi2 CCD camera system, photographed, and thickness of stained lipophilic layer was measured by NIS Elements ver. 4.40 software (Nikon, Tokyo, Japan).

Inoculation of B. cinerea spores onto tomato plants and detached leaves. Spores of B. cinerea
appearing on PDA culture plates were suspended in SDW at a final concentration of 5 × 10 4 spores ml −1 . On the crude enzyme-or inactivated enzyme-treated leaves, prepared as described above, ~600 µl of the spore suspension was sprayed over the upper side of each leaf using a pump sprayer (theoretically, 3 × 10 4 spores inoculated onto the surface of a leaf). Then, the potted plants and detached leaves were kept under the conditions described above.
For the control treatment, spores were inoculated onto plants without pretreatment with crude or inactivated enzyme solutions.
Observation of B. cinerea spore germination on leaf surfaces. After inoculation of B. cinerea spores, the detached leaves were incubated for 3dpi at 25 °C under high humidity conditions. Then, a spore suspension was sprayed on the surface of the detached leaves, and incubated for 2 dpi. The leaf was cut into 1 × 1-cm squares and the cut leaves were boiled for 1 min in a lactophenol/cotton-blue solution (Sigma-Aldrich). To remove excess stain, the cut-leaves were submerged in 2.5 g ml −1 chloral hydrate (Wako, Osaka, Japan) overnight 43 . In each treatment, more than 100 stained spores were observed per cut leaf under the light microscope. We calculated the ratio of germinated spore to total number of spore. Four cut leaves were used in each trial.  Stoughton 44 with some modifications. First, staining was done with 0.025% (w/v) thionin acetate (Sigma-Aldrich) in 0.1 mM sodium acetate and a saturated solution of Orange G dye (Sigma-Aldrich), before rinsing with a solution of ethanol and xylene (1:1). Stained sections were mounted on glass slides and observed under a BX50 light microscope with an FX380 CCD camera system (Olympus, Tokyo, Japan).

Quantification of B. cinerea DNA in crude enzyme-treated leaves. Detached leaves inoculated with
B. cinerea spores were incubated for 3 dpi under the same conditions. Then, about 100 mg of leaves were frozen in liquid nitrogen and each leaf sample was ground separately using a mortar and pestle. From the resulting powder, DNA from each sample was extracted with cetyltrimethyl ammonium bromide (CTAB) method 36 45 . Similarly, the DNA for Micro-Tom actin (SlACT, accession no. FJ532351) was quantified with specific primers [forward, 5′-CCAGGTATTGCTGATAGAATGAG-3′; reverse, 5′-GAGCCTCCAATCCAGACAC-3′] 7 . The PCR was carried out with 100 ng of total DNA using the GeneAce SYBR qPCR Mix α No ROX (Nippongene, Toyama, Japan) on a RealTime-PCR System LightCycler Nano (Roche, Basel, Switzerland) as recommended by the supplier. The thermal cycling program was as follows: 95 °C for 10 min, then 45 cycles of 95 °C for 15 s and 60 °C for 30 s. The total DNA content of each leaf was normalized to tomato SlACT content, and the ratio of fungal gene content to total DNA was calculated. Seven leaves were analyzed for each treatment. Treatment of F. japonica plants with crude enzyme solution and P. polygoni-amphibii var. tovariae. In this experiment, crude enzyme solution and spore suspension was used simultaneously. For coinoculation treatments, spore suspensions containing 1.5 × 10 5 spores ml −1 in crude enzyme solution that was adjusted as described above were sprayed on both the adaxial and abaxial sides of leaf surfaces. Control plants were inoculated with spores in inactivated enzyme solution.
After the treatments, all the inoculated plants, together with the control plants, were transferred to a dew chamber (KI Holdings Co., Ltd., Yokohama, Japan) with an RH of 100% at 20 °C without light and incubated for 48 h. After removal of the plants from the chamber, they were maintained in the glasshouse.
Seven plants with 2-10 leaves were used for each treatment, the experiments were repeated twice. After treatment with crude enzyme solution, observations of disease severity and percent leaf defoliation were assessed every 3 days until 12 dpi in both experiments.
Evaluation of disease severity. Tomato plants: After inoculation of B. cinerea spores, the potted plants were incubated for 7 days post-inoculation (dpi) in a glasshouse. Then, disease severity was evaluated according to the following the recommendations of the Japan Plant Protection Association (JPPA) (http://www.jppa.or.jp/ index.html) and the following five-step index: 0, no visible lesion; 1, one or two lesions; 2, <25% of leaf area lesioned; 3, 25-50% of leaf area lesioned; or 4, >50% of leaf area lesioned. Disease severity per plant was then calculated using the following formula: Σ (number of diseased leaves per rating × rating value) × 100/(4 × total number of leaves).
F. japonica plants: The pathogenic activity of the Puccinia obtained from the stocked leaves was evaluated on F. japonica in glasshouse experiments based on synergism significance as the rust disease symptom. Disease symptoms of the rust fungus were evaluated based on a disease severity index, according to the following scale: (0) no symptoms; (1) yellow spot without forming uredinia; (2) 1-50% of diseased area with formation of uredinia per leaf; (3) >50% of diseased area with formation of uredinia per leaf; (4) leaf chlorosis; or (5) leaf defoliation. Disease severity per plant was then calculated using the following formula: Σ (number of diseased leaves per rating × rating value)/total number of leaves per plant. The percentage of leaf defoliation was counted as the ratio of the number of defoliated leaves to the total number of leaves per plant. Mean disease severity and mean percentage of leaf defoliation were averaged over the total number of plants.
Statistical analyses. For the study of tomato plants, the disease severity data were analyzed using Student's t-test. The spore germination rate was arcsine-transformed before performing analysis of variance (ANOVA). The resulting data were analyzed by ANOVA before using Dunnett's test to compare means. The quantification of fungus DNA data was analyzed by ANOVA before using Dunnett's test to compare means. These data were analyzed using 'R' software (ver. 3.2.4; The R Foundation for Statistical Computing, Vienna, Austria).
For experiments using F. japonica, the statistical analyses were performed using JMP software (ver. 7 for Windows; SAS Institute Inc., Cary, NC, USA). The percentage of leaf defoliation was arcsine-transformed before performing ANOVA. The resulting data from each experiment were analyzed by ANOVA before using Dunnett's test to compare means.
Compliance with Ethical Standards. This article does not contain any studies with human or animal subjects performed by any of the authors.