Figure 3 | Scientific Reports

Figure 3

From: An exome sequencing based approach for genome-wide association studies in the dog

Figure 3

The effect of subsampling SNPs on r² relative to position. From the original 9541 SNPs on chromosome 1, random subsampling was performed, reducing the number of SNPs from 9000 to 1500 in 6 steps of 1500. In each step, 10 subsets were randomly sampled (without replacement). The number of SNPs that were polymorphic is depicted in the graph. At 4500 SNPs, WES and cHD had an equal number of informative tagSNPs (WES: 3310 SNPs, cHD: 3365 SNPs). Lines are obtained with LOWESS (locally weighed scatterplot smoothing).

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