Table 1: Benchmarks for FunctionAnnotator performance.

From: FunctionAnnotator, a versatile and efficient web tool for non-model organism annotation

Organism(s) # of contigs Total bp # of contigs with best hit (%) # of contigs annotated* (%) Elapsed Time
Clam 101,795 38,886,727 29,960 (29%) 35,971 (64%) 7 h 20 m 38 s
Metatranscriptome I 241 85,193 225 (93%) 126 (64%) 24 m 47 s
Metatranscriptome II 381 137,588 367 (96%) 243 (76%) 29 m 57 s
Trichomonas 19,415 24,204,403 16,866 (87%) 13,497 (70%) 3 h 26 m 56 s