Table 2 High confidence list of 100% novel transcripts along with their genomic co-ordinates, length, strand and phastCons score.

From: Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations

Gene ID Transcript ID Coordinates (mm10) Length (bp) Strand phastCons Score Novelty Score
MSTRG.10752 MSTRG.10752.1 16:91113662-91114155 493 . 0.997 100
MSTRG.11071 MSTRG.11071.1 17:16557283-16557630 347 . 0.997 100
MSTRG.11709 MSTRG.11709.2 17:39636629-39637143 514 0.997 100
MSTRG.13417 MSTRG.13417.2 19:17926989-17927998 1009 + 0.993 100
MSTRG.9039 MSTRG.9039.1 15:31655084-31655385 301 . 0.990 100
MSTRG.17446 MSTRG.17446.1 3:104752371-104752702 331 0.989 100
MSTRG.30048 MSTRG.30048.1 X:146176602-146177068 466 + 0.989 100
MSTRG.12849 MSTRG.12849.1 18:64611849-64612445 596 0.989 100
MSTRG.1816 MSTRG.1816.1 1:178299808-178300378 570 + 0.987 100
MSTRG.18663 MSTRG.18663.1 4:83421622-83422080 458 0.987 100
MSTRG.6455 MSTRG.6455.1 12:102866597-102867299 702 . 0.984 100
MSTRG.12840 MSTRG.12840.1 18:63543865-63545205 1340 + 0.981 100
MSTRG.21639 MSTRG.21639.1 5:127954976-127955377 401 . 0.978 100
MSTRG.8143 MSTRG.8143.1 14:33428605-33429024 419 . 0.973 100
MSTRG.13495 MSTRG.13495.1 19:25346816-25347223 407 . 0.973 100
MSTRG.15865 MSTRG.15865.1 2:157528311-157528617 306 . 0.970 100
MSTRG.20543 MSTRG.20543.1 5:46415104-46415426 322 + 0.970 100
MSTRG.6330 MSTRG.6330.1 12:86845755-86846203 448 . 0.970 100
MSTRG.8249 MSTRG.8249.1 14:48695580-48695978 398 . 0.969 100
MSTRG.7535 MSTRG.7535.1 13:91260953-91262729 1776 + 0.969 100
MSTRG.18684 MSTRG.18684.1 4:87103424-87105078 1654 + 0.967 100
MSTRG.18685 MSTRG.18685.1 4:87103426-87105078 1652 0.967 100
MSTRG.6715 MSTRG.6715.1 13:8289064-8289370 306 . 0.966 100
MSTRG.7905 MSTRG.7905.1 14:15949235-15949774 539 . 0.965 100
MSTRG.7913 MSTRG.7913.1 14:16451876-16452185 309 . 0.953 100
Gene ID Transcript ID Coordinates (mm10) Length (bp) Strand phastCons Score Novelty Score
MSTRG.16504 MSTRG.16504.1 3:36117033-36117334 301 . 1.000 100
MSTRG.18476 MSTRG.18476.1 4:53663579-53663885 306 . 0.993 100
MSTRG.12840 MSTRG.12840.2 18:63543888-63544690 802 + 0.989 100
MSTRG.444 MSTRG.444.1 1:52585218-52585601 383 . 0.988 100
MSTRG.7901 MSTRG.7901.1 14:14447656-14448019 363 . 0.982 100
MSTRG.25445 MSTRG.25445.1 7:127398616-127399037 421 . 0.980 100
MSTRG.3390 MSTRG.3390.1 10:129665538-129665871 333 . 0.975 100
MSTRG.6084 MSTRG.6084.1 12:72048695-72049032 337 . 0.975 100
MSTRG.10567 MSTRG.10567.1 16:53985023-53985331 308 . 0.973 100
MSTRG.10245 MSTRG.10245.1 16:23050282-23050873 591 . 0.973 100
MSTRG.6777 MSTRG.6777.2 13:15119006-15119437 431 + 0.970 100
MSTRG.26441 MSTRG.26441.1 8:72283729-72284163 434 . 0.969 100
MSTRG.10714 MSTRG.10714.1 16:88682165-88682703 538 . 0.966 100
MSTRG.25152 MSTRG.25152.1 7:107951379-107951776 397 . 0.963 100
MSTRG.14539 MSTRG.14539.1 2:34648981-34649511 530 0.956 100
MSTRG.6778 MSTRG.6778.2 13:15118406-15118934 528 + 0.956 100
MSTRG.13452 MSTRG.13452.1 19:23166931-23168119 1188 . 0.956 100
MSTRG.12890 MSTRG.12890.1 18:67920731-67921163 432 . 0.955 100
MSTRG.13017 MSTRG.13017.1 18:90311445-90311766 321 . 0.952 100