Effect of Bacillus subtilis on Aeromonas hydrophila-induced intestinal mucosal barrier function damage and inflammation in grass carp (Ctenopharyngodon idella)

Our study explored the effect of oral intubation of Bacillus subtilis on Aeromonas hydrophila-induced intestinal mucosal barrier function damage and inflammation in grass carp. The mid-intestine mucosal tissue was collected for ATPase activity measurement. Intestinal mucosa was also ultrastructurally examined with transmission electron microscope (TEM), and its permeability was determined using Evans blue (EB) and D-lactic acid. The mid-intestine pro-inflammation cytokine, MyD88 and tight junction (TJ) protein mRNA expression levels were measured using real-time quantitative PCR. The results revealed that B. subtilis was found to prevent the decrease in the activity of Na+, K+-ATPase and Ca2+, Mg2+-ATPase, as well as the increase in EB and D-lactic acid concentration and inflammation induced by A. hydrophila in grass carp. Compared with A. hydrophila groups, B. subtilis safeguarded the integrity of intestinal villi and tight junction structure and restrained A. hydrophila-induced down-regulation of TJ proteins zonula occludens-1 (ZO-1) and occludin. B. subtilis also restrained up-regulation of TJ protein claudin b, pro-inflammation cytokine tumour necrosis factor α (TNF-α), cytokine interleukin 8 (IL-8), IL-1β, and adaptor protein myeloid differentiation factor 88 (MyD88) mRNA levels. Thus, oral intubation of B. subtilis could reduce A. hydrophila-induced intestinal mucosal barrier function damage and inflammation.

the B. subtilis + A. hydrophila group and the control group in the concentration of D-lactic acid at most time points, but both groups were significantly increased at 96 h post-infection (P < 0.05, Fig. 1B). Later, concentration of D-lactic acid returned to normal levels at 120 h after challenge. Additionally, a significant (P < 0.05) interaction between time and bacteria strain was observed in the amount of EB and serum level of D-lactic acid. These data indicated that B. subtilis could largely prevent the increase in intestinal mucosal permeability caused by A. hydrophila.
TJ ultrastructure after infection with A. hydrophila. The integrity of the intercellular TJs maintains the function of the intestinal mucosal barrier. Under the transmission electron microscope, TJ structure appears as a black compact electron band that starts at the top of the epithelium and extends to the base layer. TJ structure changes in intestinal mucosal epithelial cells 48 h after oral intubation with A. hydrophila was presented in Table 1 and Fig. 2. Compared with the control (PBS) group and B. subtilis + A. hydrophila group, the A. hydrophila group displayed irregular widening of the intercellular space and increased space between TJs (P < 0.05). In contrast, the space between tight junctions of the B. subtilis + A. hydrophila group was slightly wider than the control group (P > 0.05).
ATPase activity of intestine. The mid-intestinal activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase were affected (P < 0.05) by either bacteria strain or time, whereas no significant interaction between time and bacteria strain was observed in their activity. The activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase in the PBS-treated group did not change throughout experiment. In contrast, the mid-intestinal activity of Na + , K + -ATPase decreased significantly at 48 h post-infection in the A. hydrophila group (P < 0.05). Meanwhile, mid-intestinal activity of Ca 2+ , Mg 2+ -ATPase at 24 h, 48 h and 72 h post-infection (P < 0.05, Table 2) was significantly reduced compared with the control group. Afterward, a slow increase in the mid-intestinal activity of Ca 2+ , Mg 2+ -ATPase occurred at the subsequent time points, and returned to normal levels 96 h after challenge. However, the activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase did not differ between control and B. subtilis + A. hydrophila group (P > 0.05).
Histological changes in the intestine. In the intestines of PBS-treated group, only a few inflammatory cells infiltrated the intestinal mucosa and submucosa (Fig. 3A). In the A. hydrophila group, as shown in Fig. 3B and Table 1, A. hydrophila induced infiltration of a large number of inflammatory cells into the mucosa compared to control group (P < 0.05), and then shedding and swelling of intestinal villi. In the B. subtilis + A. hydrophila group inflammatory cells also infiltrated the mucosa, but intestinal villi were intact, and goblet cells were massive compared to control group (P < 0.05, Fig. 3C and Table 1). In addition, the length of the intestinal villi significantly decreased, and its width significantly increased in the A. hydrophila group (P < 0.05). However, no significant difference in intestinal villi length and width was observed between control and B. subtilis + A. hydrophila groups (Table 1). These results indicated that B. subtilis exerts certain anti-inflammatory effects. Figure 4 revealed complex temporal changes in mRNA levels of TJ proteins ZO-1, occludin and claudin b in response to A. hydrophila challenge. Both ZO-1 and occludin were not affected (P > 0.05) by either bacteria strain or time, whereas the opposite was true for claudin b. In the B. subtilis + A. hydrophila, ZO-1 mRNA expression levels were slightly down-regulated at 12 h, 24 h and 48 h after infection with A. hydrophila, but not statistically significant (Fig. 4A). Moreover, the mRNA levels of occludin were significantly down-regulated at 12 h after infection with A. hydrophila, (P < 0.05, Fig. 4B) and then increased to roughly the same levels as PBS-stimulated controls at 72 h. Afterward, a slow increase in mRNA levels of ZO-1 and occludin occurred over 72 h, and their mRNA expression levels were slightly higher than the control group (P > 0.05). Compared with the control and B. subtilis + A. hydrophila groups, claudin b in the A. hydrophila was slightly up-regulated at 24 h, peaked at 48 h (P < 0.05) after challenge and then decreased to the same levels in the following hours (Fig. 4C). However, the levels of intestinal TJ proteins ZO-1, occludin and claudin b in the B. subtilis + A. hydrophila group did not differ significantly from the control group. In addition, no significant interaction between time and bacteria strain was observed in those genes of mRNA expression levels. Note that B. subtilis could reduce the A. hydrophila-induced changes in the levels of the TJ genes.

Expression of TJ-and mucosal immune-related genes in the intestine.
The effects of pro-inflammatory cytokines and myeloid differentiation factor 88 in the intestinal tracts of grass carp are displayed in Fig. 5. TNF-α, IL-8, and MyD 88 mRNA expression levels were affected (P < 0.05) by either bacteria strain or time, whereas the opposite was true for IL-1β. Additionally, no significant interaction (P > 0.05) between time and bacteria strain was observed in those genes of mRNA expression levels. The  1 Values are means ± SD (n = 6), and different superscripts in the same column are significantly different (P < 0.05), the below is the same.
changes in the expression of these genes were comparable. In contrast, in the A. hydrophila group, expression levels of immune-related genes increased 12 h after challenge. TNF-α mRNA expression levels were significantly increased at 24 h and 48 h post-infection (P < 0.05, Fig. 5A), and IL-8 significantly increased at 24 h post-infection (P < 0.05, Fig. 5B). Furthermore, significantly elevation was observed in the expression of MyD 88 at 24 h and 48 h after challenge (P < 0.05, Fig. 5D). Subsequently, the expression levels of these genes decreased dramatically to roughly the same levels as the PBS-treated group at 72 h post-infection. Meanwhile, IL-1β demonstrated significant changes 12 h after challenge (P < 0.05, Fig. 5C), and no significant change at other time points. Gene expression levels of TNF-α, IL-8, and MyD 88 did not differ significantly between B. subtilis + A. hydrophila and control groups at most time points, but TNF-α was significantly increased at 24 h after challenge (P < 0.05, Fig. 5A). These data revealed that A. hydrophila induced intestinal inflammation by up-regulating pro-inflammatory cytokines (IL-1β, IL-8 and TNF-α) and adaptor protein MyD 88, whereas oral intubation of B. subtilis prevented the intestinal inflammation induced by A. hydrophila.

Discussion
As previously stated, in contrast to mammals, there are few studies that have examined the mechanisms underlying damage caused by pathogenic bacteria or the protective effects of probiotics on the intestinal mucosal barrier in fish. To our knowledge, the present study is the first to investigate the effects of a specific strain of B. subtilis Ch9 on intestinal mucosa permeability, TJ structure, and expression of TJ proteins and pro-inflammatory cytokines in aquatic animals challenged with A. hydrophila. Under normal, healthy circumstances, large EB molecules are not absorbed through the intestinal mucosal barrier. When the integrity or function of intestinal mucosal barrier is impaired, a large number of EB molecules penetrate the intestinal wall directly via the tight junction in mice 14 . D-lactate is a product of bacterial metabolism and is rarely absorbed in normal conditions. The disruption of the intestinal barrier allows D-lactate to pass into systemic circulation, thus elevating serum D-lactate level 38 . Therefore, monitoring EB uptake and serum D-lactate level can reflect the degree of intestinal mucosal damage and permeability changes. In mammals, a large number of studies have shown that acute intestinal ischemia injury with intestinal villus epithelial shedding increased intestinal mucosal permeability and allowed D-lactic acid produced by intestinal bacteria to enter, thus elevating elevating serum D-lactate level 39,40 . The intestinal mucosal permeability reflects the structural integrity of TJs. Our results indicated that the amount of EB uptake, serum level of D-lactic acid and space between TJs were significantly increased after infection with A. hydrophila, but there was no significant difference between control   Table 2. Effect of A. hydrophila on the activities of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase after orally intubation with B. subtilis 1 . 1 Values are means ± SD (n = 6), and different superscripts in the same row are significantly different (P < 0.05). 2 ns: no significant difference, the below is the same.

Post-Infection time
and B. subtilis + A. hydrophila groups. That is to say, A. hydrophila could alter intestinal mucosal barrier function, leading to an increase in intestinal barrier permeability, and probiotic B. subtilis Ch9 may largely prevent the increased in intestinal mucosal permeability induced by A. hydrophila. There is a growing body of evidence that probiotics reduce epithelial barrier permeability and enhance its integrity in models of intestinal inflammation.  Ukena et al. 27 reported that E. coli Nissle is able to confer protection from the dextran sodium sulfate (DSS) colitis-associated increase in mucosal permeability to luminal substances by enhancing mucosal integrity in mice.
Our ATPase activity measurement revealed that the activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase were decreased 48 h after infection with A. hydrophila. It is rare to report a relationship between intestinal mucosa barrier function and Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase activity in aquatic animals. In the present study, we found that intestinal barrier disruption accompanied the decreased in intestinal Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase. Activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase plays an important role in maintaining the stability of intracellular Ca 2+ concentration. Ca 2+ plays a pivotal role in the formation of TJs 41 . IFN-γ inhibition of Na + , K + -ATPase activity causes an acute increase in intracellular Na + concentration, which results in a leaky and dysfunctional epithelium associated with chronic inflammation 42 . Note that the B. subtilis + A. hydrophila and control groups demonstrated no marked changes in the activity of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase.
Mucosal barrier permeability is mainly dominated by tight junctions consisting of integral membrane proteins. In mammals, many studies have indicated that changes in TJ protein expression were exposed to DSS, stimulated by cytokines, or challenged by bacteria in monolayers 27,43,44 . Meanwhile, in vitro studies have shown that pretreatment with probiotics can protect intestinal TJ proteins from stress, infection or inflammatory factors 45,46 .
Hummel et al. 47 demonstrated that Lactobacillus could regulate intestinal epithelial barrier function by regulating the expression of adhesion junction proteins. The results of the present study indicate that A. hydrophila significantly reduced the expression level of TJ protein occludin at 12 h post-infection (P < 0.05). Occludin is the major transmembrane protein that maintains and regulates tight junction barrier function. Vibrio cholerae can disrupt intestinal barrier function, mainly by damaging TJs, dysregulation of intestinal ion transport and the induction of inflammation 48,49 . However, ZO-1 expression level was slightly down-regulated after infection with A. hydrophila. Seth et al. 50 found that hydrogen peroxide could induce redistribution of the tight junction protein ZO-1, which results in an increase in the permeability of epithelial cells, and Lactobacillus rhamnosus ameliorates the hydrogen peroxide-induced epithelial barrier disruption by a PKC-and MAP kinase-dependent mechanism in the human Caco-2 cell. That is to say, A. hydrophila altered intestinal barrier function, which may be attributed to redistribution of the tight junction protein ZO-1. The most interesting finding was that A. hydrophila significantly increased claudin b mRNA expression levels 24 h after challenge and then decreased them to the same levels as PBS-treated control group. Claudins can be roughly divided into two types in terms of its function. One is the "leaky" type (Claudin-2; -7; -10; -15; -16); the other is the "tight" type (claudin-1; -4; -5; -8; -11; -14; -19) 51 . Up-regulation of the open type of claudin could increase paracellular permeability, while the other may decrease paracellular permeability. Exposure of zebrafish (Danio rerio) to acidic water caused a significant increase in paracellular permeability, along with up-regulation of claudin b 52 . Therefore, we speculate that claudin b is the "leaky" type. No significant differences in those genes were observed between control and B. subtilis + A. hydrophila groups.
Probiotics exert antimicrobial effects to prevent inflammatory bowel disease through immunomodulation and competitive adherence to the mucus and epithelium, enhancing mucosal barrier function 53 . A large number of inflammatory cells infiltrated the mucosa, submucosa and muscular layer, and resulted in fused villi, shedding, and up-regulation of intestinal inflammatory-related genes after challenge with A. hydrophila 2 . Similar results were also obtained in this study when fish were orally intubated with A. hydrophila at 48 h. We also found that numerous inflammatory cells infiltrated the mucosa in the B. subtilis + A. hydrophila group, but intestinal villi remained intact and goblet cell numbers were higher than the PBS + A. hydrophila. Research shows that supplementation of Lactobacillus rhamnosus GG could promote the intestinal structure and the villous height of tilapia 54, 55 . Disruption of intestinal barrier function is often accompanied by intestinal inflammation. During the process of inflammatory bowel disease, intestinal mucosal integrity and barrier function are impaired, which leads to translocation of bacterial antigens, thus inducing expression of pro-inflammatory cytokines and down-regulation of tight junction (TJ) proteins, such as ZO-1, occludin and claudin-1 protein, and occludin redistribution 56,57 . Our results confirmed that A. hydrophila induced immune responses, which were were consistent with previous studies 2, 58, 59 and the expression levels of immune-related genes (TNF-α, IL-8, IL-1β and MyD88) were up-regulation. It is interesting to note that in the protective groups the expression levels of those genes were significantly inhibited compared with A. hydrophila groups. Pro-inflammatory cytokines TNF-α, IFN-γ and IL-1β can increase the permeability of the intestinal epithelium, which could aggravate inflammation 54,55 . Fiocchi 60 found that probiotics can interrupt the release of a variety of pro-inflammatory cytokines to reduce the production of TNF-α and IL-8 by inhibiting the activation of NF-κB and the regulation of extracellular signalling kinase to promote the inflammation pathway. The protection mechanisms of probiotics on the intestinal mucosal function were extensive described for mammals, thus, further studies are needed to decide whether it is involved for the same processes in aquatic animals.
In conclusion, administration of the probiotic B. subtilis Ch9 prior to oral intubation could prevent functional damage to intestinal mucosal barrier and reduce inflammation induced by A. hydrophila in grass carp. We found that B. subtilis Ch9 prior to oral intubation prevented EB and D-lactic acid in the gut lumen from passing into the intestinal wall or into systemic circulation, up-regulated expression of immune-related genes (TNF-α, IL-8, IL-1β and MyD88), down-regulated expression of TJ proteins ZO-1 and occludin, and up-regulated claudin b, thus reducing mucosal barrier permeability.

Materials and Methods
Animals. Parasite and virus-free 2-year-old grass carp were supplied by Bairong Aquaculture Co., Ltd., Hubei, China. Whether the fish was infected with parasites or virus-free was tested or confirmed through the following 4 steps: First, by visual observation: we can check whether symptoms of disease can be found on fish body visually. Second, we will do necropsy, to check if there are some large parasites, which can be easily found in the intestine, such as nematode and typeworm. And then there comes the microscopic examination to check for some tiny parasties lying on the fish skin or in gills, such as microsporidia and Ichthyophirius. Finally, PCR will be carried out to see if there is any other virus in fish body (like Grass carp Reovirus, GCRV). To ensure the reliability of this experiment, each subject involved will be selected randomly. Grass carp that had a mean body weight ± standard deviation (SD) of 60.26 ± 10.17 g and a mean standard length ± SD of 13.9 cm ± 1.4 cm were selected. All fish were reared in a flow-through cylindrical tank 150 cm in diameter maintained at an average temperature of 28 ± 1 °C for two weeks 61,62 . Fish were fed commercial grass carp chow in the amount of 1.5-2% of their body weight twice/ day. During the whole experiment periods, one-third of the water was replaced daily and pH was kept at 7.5 ± 0.3, dissolved oxygen at 7 ± 0.45 mg/L, ammonia at 0.015 ± 0.002 mg/L and nitrate at 0.05 ± 0.008 mg/L. Bacterial strains. B. subtilis Ch9 and A. hydrophila strains were isolated from the intestinal tract of grass carp and silver crucian carp (Carassius carassius), respectively. These strains were identified by the conventional biochemical method and 16S rRNA sequencing and were preserved in the Laboratory of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University. B. subtilis was incubated at 37 °C for 24 h on a Luria-Bertani (LB) plate, and then single colonies were picked and inoculated into liquid LB medium at 37 °C for 14 h. A. hydrophila was incubated at 28 °C for 14 h, and harvested by centrifugation at 5000 rpm for 10 min. Bacteria cells were resuspended in phosphate buffer saline (PBS) and serially diluted to obtain concentrations of 5 × 10 7 CFU/ml B. subtilis and 2 × 10 7 CFU/ml A. hydrophila.
Infection experiment. Principles of laboratory animal care were followed and all procedures were conducted according to the guidelines established by the National Institutes of Health, and every effort was made to minimize suffering. This study was approved by the Animal Experiment Committee of Huazhong Agricultural University. One day prior to bacterial challenge, the fish were kept in a 100 L plastic tank with aerated tap water and starved to reduce fecal contamination of the intestinal lumen. The study on application effects of probiotics, oral intubation and added into feed methods were widely used in the aquatic animal 23,24 . The bacterial challenge was performed as described by Marel et al. 18 with slight modification. In short, fish were anaesthetized by bath immersion with 60 mg/L MS-222 (Sigma, E10521-10G) for 5 min before challenge. Grass carps (n = 150) were randomly divided into three groups (control group, A. hydrophila group and B. subtilis + A. hydrophila; three replicates for each group). The fish in the control were orally intubated with 0.01 M sterilized phosphate buffer saline (PBS) 0.2 mL per fish on the 1st, 3rd, 5th and 6th day; The A. hydrophila and B. subtilis + A. hydrophila groups were orally intubated with 0.01 M sterilized PBS and PBS with viable B. subtilis (5 × 10 7 CFU/ml) 0.2 ml per fish on the 1st, 3rd and 5th day before the challenge. Subsequently, fish in the two groups were orally intubated with 0.01 M sterilized PBS with viable A. hydrophila (2 × 10 7 CFU/ml) at 0.2 mL per fish on the 6th day. After challenge, biological replicates were reared separately at 28 ± 1 °C during the sampling periods. In this study, the concentration of the A. hydrophila and B. subtilis had been verified by pre-experiments.
Sampling. Samples were collected 6 hours post-infection (hpi), 12 hpi, 24 hpi, 48 hpi, 72 hpi, 96 hpi, and 120 hpi with A. hydrophila on 6 th day. For each group, six fish were examined. All fish were anaesthetized by bath immersion with 60 mg/L MS-222 for 5 min before sampling. The blood samples were collected from the caudal vein, placed at room temperature for 30 min, and then centrifuged at 3000 rpm for 15 min. Supernatants (serum) were stored at −80 °C until analysis and intestinal samples were immediately stored in RNAfixer (Aidlab Co., Ltd, Beijing, China) at 4 °C overnight and then transferred to −80 °C until RNA isolation. Additionally, the mid-intestinal tracts (approximately 1 cm) were collected 48 hpi for assessment of TEM and histology.
Scientific RepoRts | 7: 1588 | DOI:10.1038/s41598-017-01336-9 Detection of intestinal permeability by EB and serum D-lactic acid. The method used for this examination was described previously by Kitajima et al. 63 with slight modification. Briefly, the mid-intestine was dissected (length, 80 mm) and rinsed for 3-5 times in PBS. The proximal and distal intestines were ligated with cotton and a 1 ml medical syringe, and 0.2 mL of 1.5% (w/v) EB in PBS was infused into the lumen. The gut was incubated in 20 mL Krebs buffer in 95% O 2 at 37 °C for 30 min and a length of 60 mm was dissected. This portion of the intestine was washed 3-5 times in 6 mmol/L acetylcysteine until clarification, dried on filter paper at 37 °C for 24 h, and then weighed and incubated with 1 mL of formamide at 50 °C for 24 h. After removal of the intestinal tissue, the solution was centrifuged. The amount of dye eluted of the supernatant was detected at a wavelength of 655 nm. The amount of EB permeating the intestinal wall was calculated based on the standard curve of EB in formamide. Determination of serum D-lactic acid was used by fish D-lactic ELISA assay kit (Nanjing Jiancheng Bioengineering Institute, H263).

Assessment of TEM.
The mid-intestinal tracts were prepared for TEM by fixation in 2.5% glutaraldehyde for 4 h at 4 °C, post-fixation for 3 h in 1% (w/v) osmic acid dissolved in PBS and embedding the tracts in Epon. Finally, the prepared ultrathin sections were examined by TEM (Tecnai G220, FEI, USA). The space between the tight junctions was assessed by Image pro-plus6.0. Six sections from the respective six fish were randomly selected to measure the space between tight junctions for each group.
ATPase activity measurement. All fat and mesenteries of dissected mid-intestinal tracts were removed.
Frozen samples for the analysis of enzyme activities were defrosted and homogenized on ice with 10 volumes of cold 0.75% physiological saline using a homogenate oscillator (Retsch, TissueLyser II), 30 frequencies for 10 min, and the intestinal tissue was centrifuged at 2500 rpm for 10 min at 4 °C and then collected supernatant. The supernatant was diluted in 1% tissue homogenate with physiological saline at a ratio of 1:9. The detection of Na + , K + -ATPase and Ca 2+ , Mg 2+ -ATPase was conducted at 37 °C for 10 min using an ATPase assay kit (Nanjing Jiancheng Bioengineering Institute, Nanjing, China) 61 . Protein concentrations in the supernatants were determined by bicinchoninic acid (BCA) protein quantitative assay kit (Nanjing Jiancheng Bioengineering Institute, Nanjing, China).
Histological assessment. In the fish intestine, the mid-intestinal tract is the main region of the the immune responses, and sensitive to pathogens. Histological sections of the dissected mid-intestinal tracts (length 5 mm) were fixed in 4% neutral buffered paraformaldehyde and embedded in paraffin for histological analysis. The sections were stained with haematoxylin and eosin and examined under a 3D digital slice scanner (250 Flash II, 3D HISTECH, Hungary). The mean of each intestinal parameter from the respective six fish was expressed as the mean villus height (μm) and width (middle of the villus, μm) for one group. The number of inflammatory cells in the mucous membrane was counted from six different areas and the data were converted to an area of 1 mm 2 . Moreover, the goblet cells (number per villus) of ten selected villi per section were measured.
Real-time quantitative polymerase chain reaction (qRT-PCR) analysis. Total RNA was extracted from intestine samples using TRIpure reagent kit (Aidlab, RN28) following the manufacturer's instructions. The quantification of the extracted RNA was carried out using a spectrophotometer (Epoch, Winooski, VT, USA) and all the samples show high concentration as well as the ration between 260/280. Additionaly, agarose gel  electrophoresis showed that the RNA thus obtained had not degraded obviously. cDNA was synthesized by Prime Script TM RT reagent kit (TakaRa, RR047A) according to the manufacturer's instructions. The synthesized cDNA was diluted 4 times and then used as a template for qRT-PCR analysis. qRT-PCR was conducted to quantify the relative expression levels of pro-inflammatory TNF-α, IL-8, and IL-1β, as well as adaptor protein MyD88 and TJ proteins ZO-1, occludin and claudin b. qRT-PCR was also used to quantify the expression level of the internal control gene β-actin. Each reaction was conducted in a final volume of 20 μl containing10 μl of SYBR Green qPCR Master Mix (Aidlab, PC3301), 8 μl of sterile water, 0.5 μl of both forward and reverse primers (Table 3), and 1 μl of cDNA. The efficiency of all primers was determined by Standard curve method 64 . Each sample was amplified in triplicate. In parallel, β-actin primers were used in similar amplification reactions to serve as a reference gene. The mean Ct values from each sample were normalized against the mean Ct value of β-actin. The quantification of mRNA expression data using the 2 −ΔΔCT method was performed as described by Livak and Schmittgen 65 .
Statistical analysis. All statistical analyses were performed using SPSS 17.0 General Linear Models (GLM) procedure for significant differences among treatment means based on bacteria strain and time, and their interactions. All results were analysed using one-way analysis of variance (ANOVA) followed by Duncan's multiple comparison test. Differences between experimental groups were considered as significant at a probability of error at P < 0.05. Data are presented as the mean ± standard deviation (SD).