Extended Data Fig. 9: Cell signatures and cell-to-cell distance heatmap – GBM samples. | Nature Neuroscience

Extended Data Fig. 9: Cell signatures and cell-to-cell distance heatmap – GBM samples.

From: Mapping microglia states in the human brain through the integration of high-dimensional techniques

Extended Data Fig. 9

a) Cell signatures of microglial and non-microglial cells. Aggregate transcript counts of genes enriched in the given cell type (indicated in parentheses) are color-coded on the respective t-SNE maps. b) Unsupervised clustering of microglia after exclusion of non-microglial cells resulted in 14 major populations, that is clusters. The heatmap displays pairwise cell-to-cell distances. The color scale represents the pairwise distance between cells.

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