Correction to: Nature Methods https://doi.org/10.1038/s41592-018-0144-6, published online 15 October 2018.

The version of this paper originally published contained errors in reference citations: in the first paragraph of the Results section, the text “This extent of optical clarity probably results from the absence of skull above the brain22. In our specimens, Nissl-stained coronal sections through the head showed that the skull surrounds the brain only laterally and ventrally” should have read “This extent of optical clarity probably results from the absence of skull above the brain21. In our specimens, Nissl-stained coronal sections through the head22 showed that the skull surrounds the brain only laterally and ventrally.” In addition, the unit abbreviation “μm” was incorrectly divided at a line break in the third paragraph of the Discussion, which might have led to some confusion. These errors have been corrected in the PDF and HTML versions of the article.