Fig. 1: RNA FISH validation of SAVER results on Drop-seq data. | Nature Methods

Fig. 1: RNA FISH validation of SAVER results on Drop-seq data.

From: SAVER: gene expression recovery for single-cell RNA sequencing

Fig. 1

a, Overview of SAVER procedure. b, Comparison of the Gini coefficient for each gene between FISH and Drop-seq (left) and between FISH and SAVER recovered values (right) for n = 15 genes. c, Kernel density estimates of cross-cell expression distributions of LMNA (top) and CCNA2 (bottom). d, Scatter plots of expression levels for BABAM1 and LMNA. Pearson correlations were calculated across n = 17,095 cells for FISH and n = 8,498 cells for Drop-seq and SAVER.

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