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Chromatin profiling of coronary artery illuminates genetic risk for heart disease

A large-scale single-nucleus chromatin accessibility profiling study in coronary artery samples from patients with coronary artery disease generated a landscape of the regulatory activity during the disease. These data highlight cell type-specific gene programs that can improve the interpretation of human genome-wide association studies findings for cardiovascular diseases.

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Fig. 1: snATAC-seq profiling of human coronary artery.

References

  1. Assimes, T. et al. A large-scale multi-ethnic genome-wide association study of coronary artery disease. Preprint at https://www.researchsquare.com/article/rs-275591/v1 (2021). This preprint performs a large-scale multi-ancestry GWAS to determine the genetic basis of CAD across human populations.

  2. Shem, E. et al. Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution. Nat Genet. 51, 19–25 (2019). This Perspective article highlights powerful single-cell and single-molecule epigenomic technologies and their applications.

    Article  Google Scholar 

  3. Wirka, R. C. et al. Atheroprotective roles of smooth muscle cell phenotypic modulation and the TCF21 disease gene as revealed by single-cell analysis. Nat. Med. 25, 1280–1289 (2019). This paper first characterized smooth muscle cell phenotypes using single-cell transcriptomics of human coronary artery atherosclerosis.

    Article  CAS  Google Scholar 

  4. Zhang, K. et al. A single-cell atlas of chromatin accessibility in the human genome. Cell 184, 5985–6001 (2021). This paper presents a large-scale atlas of single-cell chromatin accessibility across 30 adult human tissues.

    Article  CAS  Google Scholar 

  5. Corces, M. R. et al. An improved ATAC-seq protocol reduces background an enables interrogation of frozen tissues. Nat .Meth. 14, 959–962 (2017). This paper describes the Omni-ATAC protocol that enables generation of chromatin accessibility profiles from archival frozen tissues.

    Article  CAS  Google Scholar 

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This is a summary of: Turner, A. W. et al. Single-nucleus chromatin accessibility profiling highlights regulatory mechanisms of coronary artery disease risk. Nat. Genet. https://doi.org/10.1038/s41588-022-01069-0 (2022).

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Chromatin profiling of coronary artery illuminates genetic risk for heart disease. Nat Genet 54, 750–751 (2022). https://doi.org/10.1038/s41588-022-01029-8

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