Supplementary Figure 5: Transcription-start-site verification of onco-exaptation candidates in the H727 lung cancer cell line. | Nature Genetics

Supplementary Figure 5: Transcription-start-site verification of onco-exaptation candidates in the H727 lung cancer cell line.

From: Transposable elements drive widespread expression of oncogenes in human cancers

Supplementary Figure 5

a, WashU Epigenome browser (http://epigenomegateway.wustl.edu/browser/) view of CAGE-seq and mate-paired reads where the forward read initiates from AluJb and the reverse read ends in the gene body of LIN28B in H1299 and b, H838. c, WashU Epigenome browser view of H727 CAGE-seq and mate-paired reads that where the forward read from L1PA2 and the reverse read ends in the gene body of SYT1. d, WashU Epigenome browser view of H727 CAGE-seq and mate-paired reads where the forward read initiates from Tigger3a/MLT1D and the reverse read ends in the gene body of ARID3A. e, WashU Epigenome browser view of H727 CAGE-seq over SYT1 promoters. f, WashU Epigenome browser view of H727 CAGE-seq over ARID3A promoter.

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