Reply to: ‘Organization of the genome sequence of the polyploid crop species Brassica juncea

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Fig. 1: Genome sequence organization of B. juncea with assessment using genome-ordered graphical genotypes and chromosomes A01 and J01 as examples.

Data availability

The genome assembly has now been improved as V1.5, and the updated genome assembly is available to be downloaded from the website (http://brassicadb.org/brad/datasets/pub/Genomes/Brassica_juncea/V1.5/).

References

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    Yang, J. et al. Nat. Genet. 48, 1225–1232 (2016).

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    Huang, X. et al. Genome Res. 19, 1068–1076 (2009).

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    Bancroft, I. et al. Nat. Biotechnol. 29, 762–766 (2011).

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    Harper, A. L. et al. Nat. Biotechnol. 30, 798–802 (2012).

  5. 5.

    Grover, C. E. et al. New Phytol. 196, 966–971 (2012).

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Acknowledgements

We thank S.A. Mackenzie for her opinions and discussions on this reply.

Author information

J.Y., C.J., X.W. and M.Z. designed the project. C.J. and D.L. performed genome assembly and bioinformatics analyses. J.Y. wrote the manuscript.

Correspondence to Jinghua Yang or Changmian Ji or Mingfang Zhang.

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Competing interests

The authors declare no competing interests.

Electronic supplementary material

Supplementary Text and Figures

Supplementary Figures 1–3

Reporting Summary

Supplementary Tables

Supplementary Tables 6, 8a, 9, 14a,b, 16a,b, 17, 22, 23 and 27b

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