Extended Data Fig. 9: Diversity of metagenomic rhodopsins. | Nature

Extended Data Fig. 9: Diversity of metagenomic rhodopsins.

From: Giant virus diversity and host interactions through global metagenomics

Extended Data Fig. 9

Maximum-likelihood tree (IQ-tree, LG4M + R10 substitution model) of rhodopsins after dereplication through clustering with CD-hit at a 70% similarity threshold. Clades that predominantly include rhodopsins of archaeal, bacterial, eukaryotic or NCLDV origin are highlighted in the different colours. Yellow filled circles indicate NCLDV rhodopsins that have probably been acquired from cellular organisms through HGT.

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