Extended Data Fig. 2: Hepadnaviridae maximum likelihood tree. | Nature

Extended Data Fig. 2: Hepadnaviridae maximum likelihood tree.

From: Ancient hepatitis B viruses from the Bronze Age to the Medieval period

Extended Data Fig. 2

This figure shows 26 Orthohepadnaviridae sequences (dataset 1, see Methods), including the ancient HBV sequences. Ancient genotype A sequences are shown in red, the ancient genotype B sequence in orange, ancient genotype D sequences in blue and novel genotype sequences in green. The tree was constructed in PhyML60, optimizing for topology, branch lengths and rates, with 100 bootstraps (see Methods). Internal nodes with < 70% bootstrap support are shown as polytomies.

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