Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Genome Watch
  • Published:

Scientists on a RAMPAGE to find apicomplexan transcription start sites

Nature Reviews Microbiology volume 19, page 483 (2021)Cite this article

Subjects

This month’s Genome Watch highlights approaches that enable high-resolution mapping of transcription start sites in apicomplexan parasites.

This is a preview of subscription content, access via your institution

Access options

Buy this article

  • Purchase on Springer Link
  • Instant access to full article PDF
Buy now

Prices may be subject to local taxes which are calculated during checkout

References

  1. Markus, B. M. et al. High-resolution mapping of transcription initiation in the asexual stages of Toxoplasma gondii. Front. Cell Infect. Microbiol. 10, 617998 (2020).

    Article  Google Scholar 

  2. Chappell, L. et al. Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq. BMC Genomics 21, 395 (2020).

    Article  CAS  Google Scholar 

  3. Batut, P. & Gingeras, T. R. RAMPAGE: promoter activity profiling by paired-end sequencing of 5′-complete cDNAs. Curr. Protoc. Mol. Biol. 104, 25B.11.21–25B.11.16 (2013).

    Article  Google Scholar 

  4. Adjalley, S. et al. Landscape and dynamics of transcription initiation in the malaria parasite Plasmodium falciparum. Cell Rep. 14, 2463–2475 (2016).

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK

    Johanna Hoshizaki & Marcus C. S. Lee

Authors
  1. Johanna Hoshizaki
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Marcus C. S. Lee
    View author publications

    You can also search for this author in PubMed Google Scholar

Corresponding authors

Correspondence to Johanna Hoshizaki or Marcus C. S. Lee.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Hoshizaki, J., Lee, M.C.S. Scientists on a RAMPAGE to find apicomplexan transcription start sites. Nat Rev Microbiol 19, 483 (2021). https://doi.org/10.1038/s41579-021-00587-8

Download citation

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/s41579-021-00587-8

Search

Advanced search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing